Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00535 and A4249_RS16430 are separated by 297 nucleotides A4249_RS16430 and A4249_RS00545 are separated by 164 nucleotides
A4249_RS00535: A4249_RS00535 - DEAD/DEAH box helicase, at 89,492 to 90,967
_RS00535
A4249_RS16430: A4249_RS16430 - hypothetical protein, at 91,265 to 91,825
_RS16430
A4249_RS00545: A4249_RS00545 - hypothetical protein, at 91,990 to 92,742
_RS00545
Position (kb) 91
92 Strain fitness (log2 ratio) -1
0
1
2 at 90.997 kb on - strand at 91.021 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.157 kb on - strand at 91.157 kb on - strand at 91.157 kb on - strand at 91.157 kb on - strand at 91.236 kb on + strand at 91.488 kb on + strand, within A4249_RS16430 at 91.488 kb on + strand, within A4249_RS16430 at 91.488 kb on + strand, within A4249_RS16430 at 91.488 kb on + strand, within A4249_RS16430 at 91.489 kb on - strand, within A4249_RS16430 at 91.489 kb on - strand, within A4249_RS16430 at 91.489 kb on - strand, within A4249_RS16430 at 91.501 kb on + strand, within A4249_RS16430 at 91.501 kb on + strand, within A4249_RS16430 at 91.501 kb on + strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.615 kb on + strand, within A4249_RS16430 at 91.615 kb on + strand, within A4249_RS16430 at 91.616 kb on - strand, within A4249_RS16430 at 91.722 kb on + strand, within A4249_RS16430 at 91.722 kb on + strand, within A4249_RS16430 at 91.723 kb on - strand, within A4249_RS16430 at 91.723 kb on - strand, within A4249_RS16430 at 91.811 kb on + strand at 91.811 kb on + strand at 91.811 kb on + strand at 91.811 kb on + strand at 91.811 kb on + strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.966 kb on + strand at 92.005 kb on + strand at 92.006 kb on - strand at 92.006 kb on - strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.332 kb on + strand, within A4249_RS00545 at 92.332 kb on + strand, within A4249_RS00545 at 92.332 kb on + strand, within A4249_RS00545 at 92.333 kb on - strand, within A4249_RS00545 at 92.333 kb on - strand, within A4249_RS00545 at 92.497 kb on + strand, within A4249_RS00545 at 92.497 kb on + strand, within A4249_RS00545 at 92.498 kb on - strand, within A4249_RS00545 at 92.498 kb on - strand, within A4249_RS00545 at 92.498 kb on - strand, within A4249_RS00545 at 92.677 kb on + strand at 92.677 kb on + strand at 92.677 kb on + strand at 92.677 kb on + strand at 92.678 kb on - strand at 92.786 kb on - strand at 92.800 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 90,997 - +0.3 91,021 + -0.5 91,136 + +0.3 91,136 + -0.3 91,136 + -0.9 91,136 + -1.0 91,136 + +0.4 91,136 + -0.5 91,137 - -0.1 91,137 - +0.1 91,137 - +0.1 91,137 - -1.7 91,137 - +1.6 91,137 - -0.3 91,156 + -0.2 91,156 + +1.2 91,156 + +0.1 91,156 + +0.5 91,156 + +0.2 91,157 - +0.2 91,157 - -0.5 91,157 - +0.3 91,157 - +0.6 91,236 + -0.7 91,488 + A4249_RS16430 0.40 +0.8 91,488 + A4249_RS16430 0.40 -0.0 91,488 + A4249_RS16430 0.40 +0.1 91,488 + A4249_RS16430 0.40 -0.6 91,489 - A4249_RS16430 0.40 -0.4 91,489 - A4249_RS16430 0.40 -0.5 91,489 - A4249_RS16430 0.40 -0.3 91,501 + A4249_RS16430 0.42 +1.1 91,501 + A4249_RS16430 0.42 +0.3 91,501 + A4249_RS16430 0.42 +0.1 91,502 - A4249_RS16430 0.42 -1.4 91,502 - A4249_RS16430 0.42 -0.1 91,502 - A4249_RS16430 0.42 +0.3 91,502 - A4249_RS16430 0.42 +0.3 91,615 + A4249_RS16430 0.62 -0.6 91,615 + A4249_RS16430 0.62 +1.8 91,616 - A4249_RS16430 0.63 -0.6 91,722 + A4249_RS16430 0.81 +0.1 91,722 + A4249_RS16430 0.81 +0.0 91,723 - A4249_RS16430 0.82 +0.1 91,723 - A4249_RS16430 0.82 -0.6 91,811 + -0.6 91,811 + +0.2 91,811 + +0.0 91,811 + +0.0 91,811 + +1.2 91,812 - +0.5 91,812 - +0.4 91,812 - -0.3 91,812 - -0.5 91,812 - +0.1 91,812 - -0.1 91,812 - +0.1 91,812 - -0.2 91,812 - -0.5 91,812 - +0.8 91,812 - +0.1 91,812 - +0.1 91,812 - +0.0 91,966 + -1.3 92,005 + +0.2 92,006 - +0.1 92,006 - -1.1 92,050 + -1.5 92,050 + +0.8 92,050 + -0.5 92,050 + +0.3 92,050 + +0.1 92,051 - -0.9 92,051 - -0.9 92,051 - +0.1 92,051 - -0.5 92,051 - +0.7 92,051 - +1.3 92,332 + A4249_RS00545 0.45 +0.5 92,332 + A4249_RS00545 0.45 -0.8 92,332 + A4249_RS00545 0.45 -0.7 92,333 - A4249_RS00545 0.46 -0.4 92,333 - A4249_RS00545 0.46 -0.0 92,497 + A4249_RS00545 0.67 -0.6 92,497 + A4249_RS00545 0.67 -0.3 92,498 - A4249_RS00545 0.67 +0.6 92,498 - A4249_RS00545 0.67 +0.2 92,498 - A4249_RS00545 0.67 +0.2 92,677 + -1.1 92,677 + +0.1 92,677 + -0.2 92,677 + -0.9 92,678 - -1.1 92,786 - -0.4 92,800 - -0.6
Or see this region's nucleotide sequence