Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12970

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,600,297	+		A4249_RS12965	0.34	+0.0
2,600,297	+		A4249_RS12965	0.34	+0.1
2,600,297	+		A4249_RS12965	0.34	-0.1
2,600,297	+		A4249_RS12965	0.34	-0.9
2,600,297	+		A4249_RS12965	0.34	-0.8
2,600,297	+		A4249_RS12965	0.34	+0.3
2,600,297	+		A4249_RS12965	0.34	+0.1
2,600,297	+		A4249_RS12965	0.34	+0.1
2,600,297	+		A4249_RS12965	0.34	+0.1
2,600,297	+		A4249_RS12965	0.34	+0.2
2,600,298	-		A4249_RS12965	0.34	-0.0
2,600,298	-		A4249_RS12965	0.34	-0.2
2,600,298	-		A4249_RS12965	0.34	-0.3
2,600,298	-		A4249_RS12965	0.34	-0.3
2,600,298	-		A4249_RS12965	0.34	-0.2
2,600,298	-		A4249_RS12965	0.34	+0.0
2,600,415	-		A4249_RS12965	0.47	-0.4
2,600,798	+		A4249_RS12965	0.88	+0.1
2,600,798	+		A4249_RS12965	0.88	-0.2
2,600,799	-		A4249_RS12965	0.88	+0.0
2,600,799	-		A4249_RS12965	0.88	-0.1
2,600,799	-		A4249_RS12965	0.88	-0.1
2,600,799	-		A4249_RS12965	0.88	+0.4
2,600,826	-				+0.3
2,600,826	-				-0.4
2,600,826	-				-0.4
2,600,835	+				-0.2
2,600,835	+				+0.3
2,600,835	+				-1.1
2,600,835	+				-0.0
2,600,835	+				-0.0
2,600,835	+				-0.0
2,600,835	+				-0.1
2,600,836	-				+0.4
2,600,836	-				-0.3
2,600,836	-				-0.2
2,600,836	-				-0.6
2,600,836	-				+0.0
2,600,838	-				-0.3
2,600,838	-				-0.1
2,600,838	-				-0.4
2,600,838	-				-0.1
2,600,899	+				-0.2
2,600,899	+				+0.1
2,600,899	+				-0.1
2,600,900	-				-0.3
2,600,900	-				-1.2
2,600,900	-				+0.0
2,600,900	-				-0.2
2,600,924	+				+0.0
2,600,925	-				-0.2
2,600,925	-				+0.9
2,600,925	-				+0.2
2,600,925	-				+0.6
2,600,930	+				-0.4
2,600,930	+				-0.3
2,600,930	+				-0.0
2,600,930	+				-0.5
2,600,930	+				-0.5
2,600,930	+				-0.3
2,600,931	-				-0.6
2,600,931	-				-0.4
2,600,931	-				-0.1
2,600,931	-				-0.3
2,600,931	-				+0.2
2,600,931	-				+0.3
2,600,931	-				+0.2
2,600,931	-				+0.2
2,600,931	-				+0.2
2,600,931	-				+1.5
2,600,931	-				-1.2
2,600,954	+				-0.3
2,600,954	+				-0.0
2,600,955	-				+0.1
2,600,955	-				-2.1
2,600,955	-				-0.8
2,600,955	-				+1.0
2,600,959	+				-0.1
2,600,959	+				+0.3
2,600,959	+				-0.2
2,600,959	+				-0.3
2,600,959	+				+0.7
2,600,959	+				+0.1
2,600,959	+				+0.4
2,600,959	+				-0.4
2,600,960	-				+0.2
2,600,960	-				+0.1
2,600,960	-				-0.4
2,600,960	-				+0.3
2,600,960	-				+0.1
2,600,974	+				+0.3
2,600,975	-				-0.1
2,600,975	-				+0.2
2,600,980	+				+0.1
2,600,980	+				-1.5
2,601,100	+				-0.7
2,601,100	+				-0.2
2,601,100	+				-0.3
2,601,142	-				-0.6
2,601,154	+				-0.0
2,601,154	+				+0.4
2,601,155	-				+0.1
2,601,155	-				-0.1
2,601,155	-				-0.4
2,601,183	+				-1.0
2,601,183	+				-1.5
2,601,183	+				+0.6
2,601,183	+				+0.8
2,601,183	+				+0.1
2,601,183	+				-1.2
2,601,184	-				+0.3
2,601,184	-				-0.3
2,601,184	-				-0.7
2,601,184	-				-0.4
2,601,184	-				-0.1
2,601,184	-				-0.0
2,601,184	-				-0.0
2,601,184	-				-0.8
2,601,187	+				+0.0
2,601,187	+				+0.6
2,601,187	+				+0.0
2,601,187	+				-0.7
2,601,187	+				-0.1
2,601,187	+				-0.2
2,601,187	+				+0.3
2,601,188	-				+0.6
2,601,188	-				-0.8
2,601,188	-				+0.5
2,601,249	-				+1.2
2,601,388	+				+1.8
2,601,388	+				-0.8
2,601,389	-				-2.5
2,601,389	-				+1.0
2,601,389	-				-0.5
2,601,389	-				-1.0
2,601,446	-		A4249_RS12970	0.13	+0.2
2,601,446	-		A4249_RS12970	0.13	-2.0
2,601,491	-		A4249_RS12970	0.15	-2.5
2,601,491	-		A4249_RS12970	0.15	+0.3
2,601,580	+		A4249_RS12970	0.19	-1.7
2,601,580	+		A4249_RS12970	0.19	-1.8
2,601,623	+		A4249_RS12970	0.22	+1.2
2,601,623	+		A4249_RS12970	0.22	-2.1
2,601,624	-		A4249_RS12970	0.22	-3.9
2,601,624	-		A4249_RS12970	0.22	+0.5
2,601,624	-		A4249_RS12970	0.22	+0.5
2,601,624	-		A4249_RS12970	0.22	-0.9
2,601,627	+		A4249_RS12970	0.22	+1.0
2,601,628	-		A4249_RS12970	0.22	-1.8
2,601,648	-		A4249_RS12970	0.23	+0.9
2,601,705	-		A4249_RS12970	0.26	-0.5
2,601,705	-		A4249_RS12970	0.26	+0.4
2,601,856	-		A4249_RS12970	0.34	+0.8
2,601,856	-		A4249_RS12970	0.34	-1.0
2,601,975	+		A4249_RS12970	0.40	-0.2
2,602,056	-		A4249_RS12970	0.44	-0.8
2,602,056	-		A4249_RS12970	0.44	+0.6
2,602,056	-		A4249_RS12970	0.44	+0.1
2,602,118	-		A4249_RS12970	0.47	-0.0
2,602,118	-		A4249_RS12970	0.47	+0.0
2,602,251	-		A4249_RS12970	0.54	+1.9
2,602,304	-		A4249_RS12970	0.56	+0.7
2,602,523	+		A4249_RS12970	0.68	-1.8
2,602,523	+		A4249_RS12970	0.68	+0.2
2,602,525	+		A4249_RS12970	0.68	+0.2
2,602,525	+		A4249_RS12970	0.68	-0.5
2,602,612	+		A4249_RS12970	0.72	+0.8
2,602,612	+		A4249_RS12970	0.72	-1.2
2,602,612	+		A4249_RS12970	0.72	+0.5
2,602,612	+		A4249_RS12970	0.72	-0.0
2,602,612	+		A4249_RS12970	0.72	+0.2
2,602,613	-		A4249_RS12970	0.72	+0.8
2,602,613	-		A4249_RS12970	0.72	-1.4
2,602,613	-		A4249_RS12970	0.72	-0.2
2,602,613	-		A4249_RS12970	0.72	+0.5
2,602,613	-		A4249_RS12970	0.72	-1.7
2,602,669	-		A4249_RS12970	0.75	+2.0
2,602,912	+		A4249_RS12970	0.87	-0.4
2,602,913	-		A4249_RS12970	0.87	+0.1
2,602,913	-		A4249_RS12970	0.87	-0.8
2,603,029	+				-1.0
2,603,184	+				+0.8
2,603,246	+				-0.0
2,603,252	+				+2.0
2,603,253	-				+2.3
2,603,266	+				-0.8
2,603,267	-				-1.0
2,603,267	-				-0.6
2,603,267	-				+0.3
2,603,267	-				-0.0
2,603,267	-				+0.6
2,603,497	+		A4249_RS12975	0.50	-0.5
2,603,497	+		A4249_RS12975	0.50	-0.0
2,603,497	+		A4249_RS12975	0.50	-0.7
2,603,498	-		A4249_RS12975	0.50	-0.3
2,603,804	-				-3.8
2,603,807	+				-2.0
2,603,808	-				-1.4
2,603,808	-				-1.5
2,603,854	-				+0.2
2,603,883	+				-1.4
2,603,883	+				+0.3
2,603,884	-				-1.2
2,603,905	+				-0.4
2,603,906	-				+0.3
2,603,906	-				+0.1
2,603,922	-				+0.4
2,603,922	-				+0.1
2,603,922	-				+0.5
2,603,963	+				+0.5
2,603,964	-				-2.7
2,603,987	+				-2.7
2,603,988	-				-2.5
2,603,988	-				-0.4
2,604,014	+				-0.4
2,604,014	+				-0.9
2,604,014	+				-0.4
2,604,014	+				-0.1
2,604,015	-				-0.2
2,604,015	-				-0.3
2,604,015	-				-1.0
2,604,015	-				+0.4
2,604,015	-				-1.2
2,604,034	+				-1.2
2,604,081	+				-0.8
2,604,103	+				+0.1
2,604,103	+				-1.0
2,604,103	+				-1.4
2,604,103	+				-0.1
2,604,103	+				-0.8
2,604,103	+				-0.8
2,604,103	+				-0.7
2,604,103	+				-1.8
2,604,103	+				-0.7
2,604,103	+				-0.4
2,604,104	-				+0.4
2,604,104	-				+0.5
2,604,104	-				-1.3
2,604,104	-				-0.7
2,604,104	-				-0.7
2,604,104	-				-0.9
2,604,104	-				-0.2
2,604,104	-				-1.0
2,604,104	-				-0.6
2,604,104	-				-0.3
2,604,105	-				-1.8