Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12510

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,506,239	+		A4249_RS12505	0.37	+0.2
2,506,239	+		A4249_RS12505	0.37	-0.3
2,506,239	+		A4249_RS12505	0.37	+0.2
2,506,239	+		A4249_RS12505	0.37	+0.2
2,506,239	+		A4249_RS12505	0.37	-0.6
2,506,239	+		A4249_RS12505	0.37	+0.4
2,506,239	+		A4249_RS12505	0.37	+0.2
2,506,240	-		A4249_RS12505	0.37	-0.7
2,506,240	-		A4249_RS12505	0.37	+0.1
2,506,240	-		A4249_RS12505	0.37	-0.6
2,506,240	-		A4249_RS12505	0.37	-0.4
2,506,242	-		A4249_RS12505	0.37	-0.3
2,506,352	+		A4249_RS12505	0.46	-0.3
2,506,352	+		A4249_RS12505	0.46	+0.7
2,506,353	-		A4249_RS12505	0.46	+0.8
2,506,484	+		A4249_RS12505	0.57	-0.2
2,506,484	+		A4249_RS12505	0.57	-0.2
2,506,484	+		A4249_RS12505	0.57	+0.1
2,506,484	+		A4249_RS12505	0.57	+0.4
2,506,485	-		A4249_RS12505	0.57	-0.7
2,506,485	-		A4249_RS12505	0.57	+0.5
2,506,485	-		A4249_RS12505	0.57	+0.4
2,506,485	-		A4249_RS12505	0.57	+0.3
2,506,485	-		A4249_RS12505	0.57	-0.7
2,506,485	-		A4249_RS12505	0.57	-0.4
2,506,485	-		A4249_RS12505	0.57	-1.3
2,506,485	-		A4249_RS12505	0.57	-1.3
2,506,485	-		A4249_RS12505	0.57	-0.8
2,506,651	+		A4249_RS12505	0.71	+1.1
2,506,652	-		A4249_RS12505	0.71	-0.8
2,506,652	-		A4249_RS12505	0.71	+0.1
2,506,652	-		A4249_RS12505	0.71	-0.3
2,506,703	+		A4249_RS12505	0.76	-0.4
2,506,703	+		A4249_RS12505	0.76	+0.7
2,506,703	+		A4249_RS12505	0.76	+0.7
2,506,704	-		A4249_RS12505	0.76	+0.2
2,506,704	-		A4249_RS12505	0.76	+0.4
2,507,021	+				+0.1
2,507,021	+				+0.3
2,507,022	-				-0.1
2,507,022	-				+0.1
2,507,187	+				-0.2
2,507,188	-				+0.8
2,507,188	-				-0.3
2,507,333	+				+0.5
2,507,433	+				+0.2
2,507,433	+				+0.2
2,507,434	-				+1.0
2,507,452	+				-0.9
2,507,453	-				+0.5
2,507,930	+		A4249_RS12510	0.27	+1.5
2,508,023	+		A4249_RS12510	0.31	+0.2
2,508,023	+		A4249_RS12510	0.31	+0.3
2,508,024	-		A4249_RS12510	0.31	-1.5
2,508,024	-		A4249_RS12510	0.31	+0.6
2,508,024	-		A4249_RS12510	0.31	-0.8
2,508,024	-		A4249_RS12510	0.31	-0.1
2,508,024	-		A4249_RS12510	0.31	-0.3
2,508,024	-		A4249_RS12510	0.31	-0.4
2,508,153	-		A4249_RS12510	0.35	-0.4
2,508,177	-		A4249_RS12510	0.36	+0.9
2,508,177	-		A4249_RS12510	0.36	+0.2
2,508,254	+		A4249_RS12510	0.39	+0.1
2,508,255	-		A4249_RS12510	0.39	-0.3
2,508,473	+		A4249_RS12510	0.47	-0.6
2,508,473	+		A4249_RS12510	0.47	-0.2
2,508,551	+		A4249_RS12510	0.50	-0.4
2,508,551	+		A4249_RS12510	0.50	-0.8
2,508,552	-		A4249_RS12510	0.50	+1.1
2,508,560	+		A4249_RS12510	0.51	-0.0
2,508,560	+		A4249_RS12510	0.51	-2.8
2,508,561	-		A4249_RS12510	0.51	-0.4
2,508,561	-		A4249_RS12510	0.51	+0.0
2,508,561	-		A4249_RS12510	0.51	-0.1
2,508,649	+		A4249_RS12510	0.54	+0.3
2,508,649	+		A4249_RS12510	0.54	-1.1
2,508,650	-		A4249_RS12510	0.54	-0.9
2,508,650	-		A4249_RS12510	0.54	-0.0
2,508,692	+		A4249_RS12510	0.55	-1.5
2,508,692	+		A4249_RS12510	0.55	-0.8
2,508,693	-		A4249_RS12510	0.55	-1.0
2,508,693	-		A4249_RS12510	0.55	+1.5
2,508,748	+		A4249_RS12510	0.57	-0.9
2,508,777	+		A4249_RS12510	0.59	-0.8
2,508,778	-		A4249_RS12510	0.59	+0.0
2,508,778	-		A4249_RS12510	0.59	-0.2
2,508,778	-		A4249_RS12510	0.59	-0.5
2,508,778	-		A4249_RS12510	0.59	+0.9
2,508,908	+		A4249_RS12510	0.63	-0.5
2,508,908	+		A4249_RS12510	0.63	-0.5
2,509,121	+		A4249_RS12510	0.71	+0.8
2,509,121	+		A4249_RS12510	0.71	+0.3
2,509,121	+		A4249_RS12510	0.71	+0.4
2,509,121	+		A4249_RS12510	0.71	-0.4
2,509,122	-		A4249_RS12510	0.71	-0.0
2,509,268	+		A4249_RS12510	0.77	+0.4
2,509,283	+		A4249_RS12510	0.77	+0.7
2,509,283	+		A4249_RS12510	0.77	+0.1
2,509,283	+		A4249_RS12510	0.77	-1.0
2,509,283	+		A4249_RS12510	0.77	-0.5
2,509,283	+		A4249_RS12510	0.77	-2.0
2,509,284	-		A4249_RS12510	0.77	+0.1
2,509,284	-		A4249_RS12510	0.77	+0.1
2,509,284	-		A4249_RS12510	0.77	-0.7
2,509,308	-		A4249_RS12510	0.78	+0.6
2,509,308	-		A4249_RS12510	0.78	+0.9
2,509,310	+		A4249_RS12510	0.78	+0.4
2,509,310	+		A4249_RS12510	0.78	+1.5
2,509,311	-		A4249_RS12510	0.78	+1.0
2,509,640	+				-0.3
2,509,640	+				-0.2
2,509,641	-				+0.0
2,509,641	-				-0.2
2,509,641	-				-0.7
2,509,641	-				-0.2
2,509,760	+				-1.6
2,509,760	+				-0.0
2,509,866	+				-0.4
2,509,896	+				-0.2
2,509,896	+				-0.1
2,509,897	-				+1.9
2,509,897	-				+0.7
2,509,926	+				-1.4
2,509,926	+				-0.0
2,509,926	+				+0.3
2,509,926	+				+0.6
2,509,926	+				+0.3
2,509,926	+				-0.7
2,509,926	+				-0.2
2,509,926	+				+0.4
2,509,926	+				+0.1
2,509,926	+				-0.1
2,509,926	+				-0.4
2,509,926	+				+0.7
2,509,926	+				-0.2
2,509,926	+				+0.2
2,509,927	-				-0.1
2,509,927	-				-0.0
2,509,927	-				+0.8
2,509,927	-				-1.2
2,509,927	-				-0.6
2,509,927	-				-0.4
2,509,927	-				+0.3
2,509,927	-				+0.7
2,509,927	-				-0.2
2,509,927	-				+0.1
2,509,968	+				-0.0
2,509,968	+				+0.2
2,509,968	+				-0.1
2,509,969	-				+0.4
2,509,969	-				+0.3
2,509,969	-				+0.2
2,509,969	-				-0.1
2,509,969	-				-0.5
2,509,969	-				+0.2
2,509,969	-				+0.1
2,509,969	-				-0.7
2,509,971	+				+0.2
2,509,971	+				-0.5
2,509,971	+				+0.5
2,509,971	+				+0.2
2,509,971	+				-0.2
2,509,972	-				-0.4
2,509,972	-				-0.8
2,510,015	-		A4249_RS12515	0.12	+0.2
2,510,015	-		A4249_RS12515	0.12	-0.5
2,510,019	+		A4249_RS12515	0.13	-0.2
2,510,019	+		A4249_RS12515	0.13	+0.5
2,510,019	+		A4249_RS12515	0.13	-0.2
2,510,019	+		A4249_RS12515	0.13	-0.5
2,510,019	+		A4249_RS12515	0.13	-0.6
2,510,019	+		A4249_RS12515	0.13	+0.0
2,510,019	+		A4249_RS12515	0.13	+0.4
2,510,020	-		A4249_RS12515	0.13	-1.0
2,510,020	-		A4249_RS12515	0.13	-0.3
2,510,020	-		A4249_RS12515	0.13	+0.5
2,510,020	-		A4249_RS12515	0.13	+0.8
2,510,020	-		A4249_RS12515	0.13	-0.9
2,510,020	-		A4249_RS12515	0.13	+0.2
2,510,020	-		A4249_RS12515	0.13	+0.6
2,510,020	-		A4249_RS12515	0.13	+0.8
2,510,020	-		A4249_RS12515	0.13	-0.2
2,510,020	-		A4249_RS12515	0.13	+0.0
2,510,020	-		A4249_RS12515	0.13	-0.8
2,510,020	-		A4249_RS12515	0.13	-1.5
2,510,020	-		A4249_RS12515	0.13	-0.3
2,510,020	-		A4249_RS12515	0.13	+0.2
2,510,020	-		A4249_RS12515	0.13	+0.1
2,510,020	-		A4249_RS12515	0.13	+0.7
2,510,202	+		A4249_RS12515	0.32	-2.2
2,510,203	-		A4249_RS12515	0.32	+0.6
2,510,203	-		A4249_RS12515	0.32	-0.2
2,510,224	+		A4249_RS12515	0.34	+0.2
2,510,224	+		A4249_RS12515	0.34	-0.8
2,510,412	+		A4249_RS12515	0.54	-0.2
2,510,413	-		A4249_RS12515	0.54	-0.1
2,510,413	-		A4249_RS12515	0.54	-0.3
2,510,413	-		A4249_RS12515	0.54	-0.1
2,510,413	-		A4249_RS12515	0.54	+0.4
2,510,640	+		A4249_RS12515	0.77	+0.2
2,510,640	+		A4249_RS12515	0.77	-0.1
2,510,640	+		A4249_RS12515	0.77	+0.1
2,510,641	-		A4249_RS12515	0.77	-0.1
2,510,641	-		A4249_RS12515	0.77	-0.4
2,510,748	+		A4249_RS12515	0.88	-0.2
2,510,748	+		A4249_RS12515	0.88	+0.2
2,510,748	+		A4249_RS12515	0.88	-0.7
2,510,749	-		A4249_RS12515	0.88	+1.1
2,510,749	-		A4249_RS12515	0.88	+1.2
2,510,749	-		A4249_RS12515	0.88	-0.1
2,510,800	+				+0.1
2,510,800	+				+0.3
2,510,841	+				-0.7
2,510,841	+				-0.1
2,510,842	-				-0.3
2,510,842	-				-0.2
2,510,842	-				-0.1
2,510,842	-				-0.8
2,510,842	-				+0.1
2,510,842	-				-0.2
2,510,842	-				-0.7
2,510,842	-				+0.9
2,510,890	+				-0.0
2,510,890	+				+0.4
2,510,890	+				+0.1
2,510,890	+				+1.0
2,510,891	-				+0.4