Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12055

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,418,564	+		A4249_RS12045	0.49	-1.4
2,418,564	+		A4249_RS12045	0.49	-0.3
2,418,650	+		A4249_RS12045	0.67	-2.9
2,418,650	+		A4249_RS12045	0.67	-1.0
2,418,650	+		A4249_RS12045	0.67	+0.9
2,418,650	+		A4249_RS12045	0.67	+0.2
2,418,650	+		A4249_RS12045	0.67	-0.7
2,418,650	+		A4249_RS12045	0.67	-0.3
2,418,651	-		A4249_RS12045	0.67	-0.5
2,418,651	-		A4249_RS12045	0.67	+0.9
2,418,651	-		A4249_RS12045	0.67	+0.2
2,418,651	-		A4249_RS12045	0.67	-0.9
2,418,651	-		A4249_RS12045	0.67	+0.1
2,418,695	+		A4249_RS12045	0.76	+0.2
2,418,696	-		A4249_RS12045	0.77	-0.6
2,418,696	-		A4249_RS12045	0.77	+0.6
2,418,696	-		A4249_RS12045	0.77	+0.2
2,418,913	+		A4249_RS12050	0.20	-0.5
2,418,913	+		A4249_RS12050	0.20	-0.1
2,418,913	+		A4249_RS12050	0.20	+0.1
2,418,913	+		A4249_RS12050	0.20	+0.5
2,418,914	-		A4249_RS12050	0.20	+0.4
2,418,943	+		A4249_RS12050	0.25	+0.4
2,418,943	+		A4249_RS12050	0.25	+1.4
2,418,943	+		A4249_RS12050	0.25	-0.1
2,418,943	+		A4249_RS12050	0.25	-1.0
2,418,943	+		A4249_RS12050	0.25	+0.2
2,418,943	+		A4249_RS12050	0.25	+0.9
2,418,943	+		A4249_RS12050	0.25	+0.2
2,418,943	+		A4249_RS12050	0.25	+0.6
2,418,944	-		A4249_RS12050	0.26	-0.4
2,418,944	-		A4249_RS12050	0.26	+0.5
2,418,944	-		A4249_RS12050	0.26	-0.8
2,418,944	-		A4249_RS12050	0.26	-1.2
2,418,944	-		A4249_RS12050	0.26	+0.4
2,418,944	-		A4249_RS12050	0.26	+0.5
2,418,944	-		A4249_RS12050	0.26	+0.7
2,418,944	-		A4249_RS12050	0.26	+0.1
2,418,945	+		A4249_RS12050	0.26	-0.6
2,418,945	+		A4249_RS12050	0.26	+0.1
2,418,945	+		A4249_RS12050	0.26	-0.1
2,418,945	+		A4249_RS12050	0.26	+0.4
2,418,945	+		A4249_RS12050	0.26	+0.3
2,418,946	-		A4249_RS12050	0.26	+0.2
2,418,946	-		A4249_RS12050	0.26	-0.3
2,418,946	-		A4249_RS12050	0.26	+1.4
2,418,946	-		A4249_RS12050	0.26	-0.4
2,418,946	-		A4249_RS12050	0.26	+1.0
2,418,946	-		A4249_RS12050	0.26	+0.9
2,419,129	+		A4249_RS12050	0.59	-0.5
2,419,129	+		A4249_RS12050	0.59	-0.5
2,419,129	+		A4249_RS12050	0.59	+0.9
2,419,129	+		A4249_RS12050	0.59	+0.4
2,419,129	+		A4249_RS12050	0.59	+0.8
2,419,129	+		A4249_RS12050	0.59	-0.4
2,419,129	+		A4249_RS12050	0.59	-0.2
2,419,130	-		A4249_RS12050	0.59	+0.4
2,419,130	-		A4249_RS12050	0.59	+0.4
2,419,130	-		A4249_RS12050	0.59	+0.0
2,419,130	-		A4249_RS12050	0.59	-0.6
2,419,130	-		A4249_RS12050	0.59	-0.4
2,419,130	-		A4249_RS12050	0.59	-2.2
2,419,130	-		A4249_RS12050	0.59	+0.2
2,419,130	-		A4249_RS12050	0.59	+0.2
2,419,130	-		A4249_RS12050	0.59	+0.9
2,419,246	+		A4249_RS12050	0.80	+0.4
2,419,246	+		A4249_RS12050	0.80	-0.0
2,419,246	+		A4249_RS12050	0.80	-0.5
2,419,247	-		A4249_RS12050	0.80	-0.6
2,419,247	-		A4249_RS12050	0.80	-0.3
2,419,247	-		A4249_RS12050	0.80	-0.2
2,419,252	+		A4249_RS12050	0.81	-2.5
2,419,252	+		A4249_RS12050	0.81	-0.9
2,419,253	-		A4249_RS12050	0.81	-0.3
2,419,282	+		A4249_RS12050	0.86	-0.4
2,419,282	+		A4249_RS12050	0.86	+1.2
2,419,282	+		A4249_RS12050	0.86	+1.5
2,419,282	+		A4249_RS12050	0.86	+1.2
2,419,282	+		A4249_RS12050	0.86	+1.1
2,419,283	-		A4249_RS12050	0.87	-0.0
2,419,283	-		A4249_RS12050	0.87	-0.7
2,419,283	-		A4249_RS12050	0.87	-0.3
2,419,283	-		A4249_RS12050	0.87	+0.2
2,419,283	-		A4249_RS12050	0.87	-0.0
2,419,309	+				-0.9
2,419,309	+				+0.1
2,419,310	-				+0.0
2,419,310	-				+0.7
2,419,310	-				+0.4
2,419,468	+				+0.2
2,419,469	-				-0.2
2,419,469	-				+0.2
2,419,469	-				+0.2
2,420,008	+		A4249_RS12055	0.50	-1.0
2,420,009	-		A4249_RS12055	0.50	-0.9
2,420,105	+		A4249_RS12055	0.57	-0.5
2,420,106	-		A4249_RS12055	0.57	+0.1
2,420,106	-		A4249_RS12055	0.57	-0.5
2,420,419	+		A4249_RS12055	0.81	+0.1
2,420,419	+		A4249_RS12055	0.81	-0.5
2,420,419	+		A4249_RS12055	0.81	-0.0
2,420,419	+		A4249_RS12055	0.81	+0.2
2,420,420	-		A4249_RS12055	0.81	+1.1
2,420,420	-		A4249_RS12055	0.81	-3.1
2,420,730	+				+0.3
2,420,731	-				+0.5
2,420,731	-				+0.1
2,420,785	-		A4249_RS12060	0.16	-0.5
2,420,785	-		A4249_RS12060	0.16	-0.1
2,420,913	+		A4249_RS12060	0.32	+1.2
2,420,913	+		A4249_RS12060	0.32	-0.0
2,420,913	+		A4249_RS12060	0.32	-0.2
2,420,913	+		A4249_RS12060	0.32	-0.1
2,420,914	-		A4249_RS12060	0.32	-0.4
2,420,914	-		A4249_RS12060	0.32	-1.0
2,420,914	-		A4249_RS12060	0.32	-0.6
2,420,914	-		A4249_RS12060	0.32	+0.2
2,420,914	-		A4249_RS12060	0.32	-0.6
2,420,914	-		A4249_RS12060	0.32	-0.5
2,420,914	-		A4249_RS12060	0.32	-0.3
2,421,093	+		A4249_RS12060	0.55	+0.1
2,421,094	-		A4249_RS12060	0.55	+0.3
2,421,094	-		A4249_RS12060	0.55	-0.2
2,421,341	+		A4249_RS12060	0.87	+0.1
2,421,341	+		A4249_RS12060	0.87	+0.1
2,421,341	+		A4249_RS12060	0.87	+0.2
2,421,341	+		A4249_RS12060	0.87	+0.7
2,421,341	+		A4249_RS12060	0.87	-0.1
2,421,342	-		A4249_RS12060	0.87	-0.1
2,421,342	-		A4249_RS12060	0.87	+0.5
2,421,342	-		A4249_RS12060	0.87	+0.3
2,421,342	-		A4249_RS12060	0.87	+0.1
2,421,384	+				+0.0
2,421,385	-				-0.8
2,421,385	-				+0.6
2,421,385	-				-0.1
2,421,393	+				-0.1
2,421,393	+				-0.2
2,421,454	+				+0.2
2,421,454	+				-1.2
2,421,454	+				+0.8
2,421,454	+				-0.7
2,421,454	+				-0.6
2,421,454	+				+1.5
2,421,454	+				-1.4
2,421,455	-				+1.0
2,421,455	-				-0.8
2,421,455	-				-0.9
2,421,455	-				-0.1
2,421,459	+				-0.8
2,421,459	+				+0.6
2,421,459	+				-0.8
2,421,459	+				+0.2
2,421,459	+				-0.4
2,421,459	+				+0.6
2,421,460	-				-1.2
2,421,460	-				-0.6
2,421,460	-				-0.2
2,421,460	-				-0.5
2,421,460	-				-0.9
2,421,460	-				+0.1
2,421,460	-				+0.2
2,421,460	-				-0.7
2,421,460	-				-0.7
2,421,502	-		A4249_RS12065	0.13	-0.1