Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11850

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,381,290	+				-1.6
2,381,290	+				-0.1
2,381,290	+				-0.4
2,381,290	+				-0.4
2,381,290	+				-0.2
2,381,290	+				-0.7
2,381,291	-				+1.6
2,381,291	-				+0.8
2,381,291	-				-0.1
2,381,291	-				+0.0
2,381,304	-				+0.6
2,381,327	+				+0.1
2,381,327	+				+0.2
2,381,369	+				-1.3
2,381,369	+				+0.0
2,381,369	+				-0.3
2,381,369	+				+2.0
2,381,370	-				+1.4
2,381,370	-				+0.6
2,381,370	-				+1.8
2,381,370	-				-0.1
2,381,370	-				-0.3
2,381,370	-				-0.7
2,381,377	+				+0.6
2,381,378	-				-0.4
2,381,479	+		A4249_RS11845	0.16	-0.1
2,381,495	+		A4249_RS11845	0.18	-0.6
2,381,495	+		A4249_RS11845	0.18	-1.5
2,381,495	+		A4249_RS11845	0.18	-0.3
2,381,496	-		A4249_RS11845	0.18	-0.4
2,381,496	-		A4249_RS11845	0.18	+0.9
2,381,496	-		A4249_RS11845	0.18	-1.2
2,381,496	-		A4249_RS11845	0.18	+2.1
2,381,501	+		A4249_RS11845	0.19	+0.5
2,381,502	-		A4249_RS11845	0.19	-0.8
2,381,580	+		A4249_RS11845	0.27	-1.0
2,381,639	+		A4249_RS11845	0.34	-0.7
2,381,640	-		A4249_RS11845	0.34	-0.4
2,381,726	+		A4249_RS11845	0.43	-0.0
2,381,726	+		A4249_RS11845	0.43	+0.3
2,381,726	+		A4249_RS11845	0.43	-0.3
2,381,726	+		A4249_RS11845	0.43	+0.2
2,381,726	+		A4249_RS11845	0.43	+1.2
2,381,726	+		A4249_RS11845	0.43	-0.3
2,381,727	-		A4249_RS11845	0.43	-0.8
2,381,727	-		A4249_RS11845	0.43	+0.0
2,381,727	-		A4249_RS11845	0.43	-0.2
2,381,727	-		A4249_RS11845	0.43	+0.2
2,381,727	-		A4249_RS11845	0.43	+0.1
2,381,867	+		A4249_RS11845	0.59	-0.1
2,381,868	-		A4249_RS11845	0.59	+0.3
2,381,897	+		A4249_RS11845	0.62	+0.3
2,381,897	+		A4249_RS11845	0.62	-0.1
2,381,897	+		A4249_RS11845	0.62	+1.4
2,381,897	+		A4249_RS11845	0.62	-0.2
2,381,897	+		A4249_RS11845	0.62	+0.0
2,381,897	+		A4249_RS11845	0.62	-0.1
2,381,897	+		A4249_RS11845	0.62	-0.6
2,381,898	-		A4249_RS11845	0.62	+1.3
2,381,898	-		A4249_RS11845	0.62	-0.4
2,381,898	-		A4249_RS11845	0.62	+0.3
2,381,898	-		A4249_RS11845	0.62	-0.3
2,381,898	-		A4249_RS11845	0.62	-0.1
2,381,898	-		A4249_RS11845	0.62	+0.4
2,381,898	-		A4249_RS11845	0.62	-0.4
2,381,898	-		A4249_RS11845	0.62	+0.9
2,381,924	+		A4249_RS11845	0.65	+1.1
2,381,925	-		A4249_RS11845	0.65	+0.5
2,381,925	-		A4249_RS11845	0.65	+0.1
2,382,029	+		A4249_RS11845	0.77	+0.3
2,382,029	+		A4249_RS11845	0.77	-1.4
2,382,029	+		A4249_RS11845	0.77	+0.1
2,382,029	+		A4249_RS11845	0.77	+0.2
2,382,030	-		A4249_RS11845	0.77	+0.0
2,382,030	-		A4249_RS11845	0.77	+0.5
2,382,030	-		A4249_RS11845	0.77	+0.4
2,382,030	-		A4249_RS11845	0.77	-0.0
2,382,030	-		A4249_RS11845	0.77	-0.1
2,382,030	-		A4249_RS11845	0.77	-0.1
2,382,098	-		A4249_RS11845	0.84	-0.1
2,382,132	-		A4249_RS11845	0.88	+0.2
2,382,132	-		A4249_RS11845	0.88	-0.5
2,382,132	-		A4249_RS11845	0.88	+0.0
2,382,184	+				+0.1
2,382,184	+				+0.5
2,382,184	+				+0.6
2,382,185	-				+0.5
2,382,185	-				-1.5
2,382,301	+		A4249_RS11850	0.20	-1.2
2,382,302	-		A4249_RS11850	0.20	-0.9
2,382,331	-		A4249_RS11850	0.33	-0.4
2,382,427	+		A4249_RS11850	0.77	-1.1
2,382,427	+		A4249_RS11850	0.77	+0.2
2,382,427	+		A4249_RS11850	0.77	+0.8
2,382,427	+		A4249_RS11850	0.77	-0.5
2,382,427	+		A4249_RS11850	0.77	+0.4
2,382,427	+		A4249_RS11850	0.77	-0.8
2,382,427	+		A4249_RS11850	0.77	+0.2
2,382,427	+		A4249_RS11850	0.77	-0.9
2,382,427	+		A4249_RS11850	0.77	-1.0
2,382,427	+		A4249_RS11850	0.77	-1.2
2,382,427	+		A4249_RS11850	0.77	-0.1
2,382,427	+		A4249_RS11850	0.77	-1.7
2,382,428	-		A4249_RS11850	0.77	+0.6
2,382,428	-		A4249_RS11850	0.77	+0.3
2,382,428	-		A4249_RS11850	0.77	-0.9
2,382,438	+		A4249_RS11850	0.82	+0.1
2,382,438	+		A4249_RS11850	0.82	-0.2
2,382,439	-		A4249_RS11850	0.82	-2.1
2,382,496	+				+0.2
2,382,496	+				+0.9
2,382,496	+				-1.5
2,382,497	-				-0.5
2,382,497	-				-0.5
2,382,497	-				+0.0
2,382,497	-				-0.0
2,382,497	-				+1.2
2,382,497	-				+0.5
2,382,694	+		A4249_RS11855	0.30	+0.2
2,382,694	+		A4249_RS11855	0.30	-0.6
2,382,694	+		A4249_RS11855	0.30	-0.2
2,382,695	-		A4249_RS11855	0.30	+0.3
2,382,695	-		A4249_RS11855	0.30	+1.1
2,382,706	+		A4249_RS11855	0.33	-0.9
2,382,706	+		A4249_RS11855	0.33	+0.2
2,382,706	+		A4249_RS11855	0.33	+0.3
2,382,706	+		A4249_RS11855	0.33	+0.0
2,382,706	+		A4249_RS11855	0.33	+0.5
2,382,706	+		A4249_RS11855	0.33	+0.3
2,382,706	+		A4249_RS11855	0.33	-1.4
2,382,706	+		A4249_RS11855	0.33	-0.4
2,382,706	+		A4249_RS11855	0.33	+0.8
2,382,706	+		A4249_RS11855	0.33	+0.5
2,382,706	+		A4249_RS11855	0.33	+0.7
2,382,706	+		A4249_RS11855	0.33	-0.1
2,382,706	+		A4249_RS11855	0.33	-1.1
2,382,706	+		A4249_RS11855	0.33	+0.4
2,382,706	+		A4249_RS11855	0.33	-0.5
2,382,706	+		A4249_RS11855	0.33	-0.8
2,382,707	-		A4249_RS11855	0.34	+0.5
2,382,707	-		A4249_RS11855	0.34	-1.6
2,382,707	-		A4249_RS11855	0.34	+0.3
2,382,707	-		A4249_RS11855	0.34	-1.1
2,382,707	-		A4249_RS11855	0.34	+0.5
2,382,707	-		A4249_RS11855	0.34	+0.5
2,382,707	-		A4249_RS11855	0.34	+0.1
2,382,707	-		A4249_RS11855	0.34	-0.6
2,382,707	-		A4249_RS11855	0.34	+0.1
2,382,707	-		A4249_RS11855	0.34	-0.0
2,382,707	-		A4249_RS11855	0.34	+0.3
2,382,707	-		A4249_RS11855	0.34	-0.1
2,382,707	-		A4249_RS11855	0.34	-0.2
2,382,707	-		A4249_RS11855	0.34	-0.3
2,382,707	-		A4249_RS11855	0.34	-0.0
2,382,707	-		A4249_RS11855	0.34	-1.2
2,382,707	-		A4249_RS11855	0.34	+0.3
2,382,707	-		A4249_RS11855	0.34	+0.6
2,382,707	-		A4249_RS11855	0.34	-0.2
2,382,707	-		A4249_RS11855	0.34	+0.8
2,382,707	-		A4249_RS11855	0.34	+0.7
2,382,707	-		A4249_RS11855	0.34	+0.9
2,382,707	-		A4249_RS11855	0.34	+0.2
2,382,707	-		A4249_RS11855	0.34	-0.1
2,382,710	+		A4249_RS11855	0.34	-0.7
2,382,710	+		A4249_RS11855	0.34	-0.6
2,382,710	+		A4249_RS11855	0.34	-0.4
2,382,710	+		A4249_RS11855	0.34	-0.4
2,382,711	-		A4249_RS11855	0.35	+0.3
2,382,711	-		A4249_RS11855	0.35	+0.2
2,382,711	-		A4249_RS11855	0.35	-1.5
2,382,711	-		A4249_RS11855	0.35	-1.8
2,382,711	-		A4249_RS11855	0.35	-0.5
2,382,813	+		A4249_RS11855	0.61	-1.8
2,382,814	-		A4249_RS11855	0.61	-0.8
2,382,814	-		A4249_RS11855	0.61	+0.1
2,382,850	+		A4249_RS11855	0.71	-1.1
2,382,850	+		A4249_RS11855	0.71	+0.6
2,382,949	+				-0.9
2,382,981	+				-1.0
2,382,981	+				+0.2
2,382,981	+				-0.1
2,382,981	+				+0.1
2,382,982	-				-0.0
2,382,982	-				-0.3
2,382,982	-				-0.7
2,382,982	-				-0.2
2,382,985	+				+0.1
2,383,020	-				-0.3
2,383,027	+				+0.2
2,383,027	+				+1.1
2,383,028	-				-0.1
2,383,028	-				+1.5
2,383,028	-				-0.0
2,383,028	-				-0.8
2,383,043	+				-0.1
2,383,044	-				+0.8
2,383,044	-				+0.3
2,383,044	-				-1.5
2,383,044	-				-0.4
2,383,137	+				+0.8
2,383,137	+				-0.6
2,383,137	+				-0.2
2,383,222	+				-0.6
2,383,222	+				-0.6
2,383,223	-				+1.8
2,383,246	+				-0.1
2,383,247	-				-1.3
2,383,247	-				+0.4
2,383,247	-				+0.2
2,383,267	-				-0.9
2,383,333	+				-0.6
2,383,333	+				+0.3
2,383,334	-				+0.5
2,383,334	-				-0.2
2,383,334	-				+0.2
2,383,334	-				-0.5
2,383,393	+		A4249_RS11860	0.25	-0.1
2,383,393	+		A4249_RS11860	0.25	+0.5
2,383,393	+		A4249_RS11860	0.25	-0.3
2,383,393	+		A4249_RS11860	0.25	-0.4
2,383,393	+		A4249_RS11860	0.25	-0.2
2,383,393	+		A4249_RS11860	0.25	+0.2
2,383,393	+		A4249_RS11860	0.25	-0.6
2,383,393	+		A4249_RS11860	0.25	+0.0
2,383,393	+		A4249_RS11860	0.25	+0.0
2,383,393	+		A4249_RS11860	0.25	-1.2
2,383,394	-		A4249_RS11860	0.25	-1.9
2,383,394	-		A4249_RS11860	0.25	-0.5
2,383,394	-		A4249_RS11860	0.25	+0.5
2,383,394	-		A4249_RS11860	0.25	+0.6
2,383,394	-		A4249_RS11860	0.25	-0.1
2,383,394	-		A4249_RS11860	0.25	+0.0
2,383,394	-		A4249_RS11860	0.25	+1.0
2,383,394	-		A4249_RS11860	0.25	-0.2
2,383,394	-		A4249_RS11860	0.25	-1.1
2,383,394	-		A4249_RS11860	0.25	+0.9
2,383,397	+		A4249_RS11860	0.26	-0.7
2,383,397	+		A4249_RS11860	0.26	+0.1
2,383,397	+		A4249_RS11860	0.26	-0.1
2,383,397	+		A4249_RS11860	0.26	+0.3
2,383,397	+		A4249_RS11860	0.26	-1.2
2,383,397	+		A4249_RS11860	0.26	-1.5
2,383,398	-		A4249_RS11860	0.26	-0.1
2,383,398	-		A4249_RS11860	0.26	-0.1
2,383,398	-		A4249_RS11860	0.26	-0.4
2,383,398	-		A4249_RS11860	0.26	-0.7
2,383,398	-		A4249_RS11860	0.26	-0.1
2,383,398	-		A4249_RS11860	0.26	-0.9
2,383,398	-		A4249_RS11860	0.26	+0.3
2,383,398	-		A4249_RS11860	0.26	+0.0
2,383,398	-		A4249_RS11860	0.26	-0.3