Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09630 and A4249_RS09635 are separated by 12 nucleotides A4249_RS09635 and A4249_RS09640 are separated by 140 nucleotides A4249_RS09640 and A4249_RS09645 are separated by 11 nucleotides A4249_RS09645 and A4249_RS09650 are separated by 49 nucleotides
A4249_RS09630: A4249_RS09630 - flagella basal body P-ring formation protein FlgA, at 1,920,766 to 1,921,371
_RS09630
A4249_RS09635: A4249_RS09635 - flagellar basal body L-ring protein FlgH, at 1,921,384 to 1,922,106
_RS09635
A4249_RS09640: A4249_RS09640 - hypothetical protein, at 1,922,247 to 1,922,675
_RS09640
A4249_RS09645: A4249_RS09645 - hypothetical protein, at 1,922,687 to 1,923,187
_RS09645
A4249_RS09650: A4249_RS09650 - DUF885 domain-containing protein, at 1,923,237 to 1,925,024
_RS09650
Position (kb) 1922
1923 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1921.389 kb on + strand at 1921.389 kb on + strand at 1921.389 kb on + strand at 1921.389 kb on + strand at 1921.390 kb on - strand at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.608 kb on + strand, within A4249_RS09635 at 1921.609 kb on - strand, within A4249_RS09635 at 1921.609 kb on - strand, within A4249_RS09635 at 1922.026 kb on + strand, within A4249_RS09635 at 1922.257 kb on + strand at 1922.257 kb on + strand at 1922.258 kb on - strand at 1922.258 kb on - strand at 1922.322 kb on + strand, within A4249_RS09640 at 1922.323 kb on - strand, within A4249_RS09640 at 1922.323 kb on - strand, within A4249_RS09640 at 1922.430 kb on + strand, within A4249_RS09640 at 1922.431 kb on - strand, within A4249_RS09640 at 1922.462 kb on + strand, within A4249_RS09640 at 1922.462 kb on + strand, within A4249_RS09640 at 1922.462 kb on + strand, within A4249_RS09640 at 1922.463 kb on - strand, within A4249_RS09640 at 1922.463 kb on - strand, within A4249_RS09640 at 1922.703 kb on + strand at 1922.856 kb on - strand, within A4249_RS09645 at 1922.960 kb on + strand, within A4249_RS09645 at 1922.960 kb on + strand, within A4249_RS09645 at 1922.961 kb on - strand, within A4249_RS09645 at 1923.128 kb on + strand, within A4249_RS09645 at 1923.128 kb on + strand, within A4249_RS09645 at 1923.202 kb on + strand at 1923.202 kb on + strand at 1923.202 kb on + strand at 1923.203 kb on - strand at 1923.203 kb on - strand at 1923.203 kb on - strand at 1923.203 kb on - strand at 1923.249 kb on + strand at 1923.249 kb on + strand at 1923.250 kb on - strand at 1923.250 kb on - strand at 1923.250 kb on - strand at 1923.250 kb on - strand at 1923.369 kb on + strand at 1923.369 kb on + strand at 1923.370 kb on - strand at 1923.370 kb on - strand at 1923.370 kb on - strand at 1923.378 kb on + strand at 1923.378 kb on + strand at 1923.378 kb on + strand at 1923.379 kb on - strand at 1923.379 kb on - strand at 1923.379 kb on - strand at 1923.379 kb on - strand at 1923.379 kb on - strand at 1923.379 kb on - strand at 1923.379 kb on - strand at 1923.570 kb on + strand, within A4249_RS09650 at 1923.570 kb on + strand, within A4249_RS09650 at 1923.570 kb on + strand, within A4249_RS09650 at 1923.571 kb on - strand, within A4249_RS09650 at 1923.571 kb on - strand, within A4249_RS09650 at 1923.572 kb on + strand, within A4249_RS09650 at 1923.572 kb on + strand, within A4249_RS09650 at 1923.572 kb on + strand, within A4249_RS09650 at 1923.572 kb on + strand, within A4249_RS09650 at 1923.572 kb on + strand, within A4249_RS09650 at 1923.572 kb on + strand, within A4249_RS09650 at 1923.572 kb on + strand, within A4249_RS09650 at 1923.573 kb on - strand, within A4249_RS09650 at 1923.573 kb on - strand, within A4249_RS09650 at 1923.573 kb on - strand, within A4249_RS09650 at 1923.573 kb on - strand, within A4249_RS09650 at 1923.603 kb on + strand, within A4249_RS09650 at 1923.603 kb on + strand, within A4249_RS09650 at 1923.603 kb on + strand, within A4249_RS09650 at 1923.604 kb on - strand, within A4249_RS09650 at 1923.661 kb on - strand, within A4249_RS09650 at 1923.661 kb on - strand, within A4249_RS09650 at 1923.661 kb on - strand, within A4249_RS09650 at 1923.661 kb on - strand, within A4249_RS09650 at 1923.661 kb on - strand, within A4249_RS09650
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 1,921,389 + -0.5 1,921,389 + -2.6 1,921,389 + -1.6 1,921,389 + -0.3 1,921,390 - +2.0 1,921,516 + A4249_RS09635 0.18 +0.6 1,921,516 + A4249_RS09635 0.18 -0.2 1,921,516 + A4249_RS09635 0.18 +0.2 1,921,516 + A4249_RS09635 0.18 +1.0 1,921,516 + A4249_RS09635 0.18 -0.2 1,921,516 + A4249_RS09635 0.18 +0.1 1,921,517 - A4249_RS09635 0.18 +0.1 1,921,517 - A4249_RS09635 0.18 -0.4 1,921,517 - A4249_RS09635 0.18 -1.2 1,921,517 - A4249_RS09635 0.18 -0.1 1,921,517 - A4249_RS09635 0.18 +0.0 1,921,517 - A4249_RS09635 0.18 +0.9 1,921,608 + A4249_RS09635 0.31 -0.2 1,921,609 - A4249_RS09635 0.31 -1.4 1,921,609 - A4249_RS09635 0.31 +0.4 1,922,026 + A4249_RS09635 0.89 -0.2 1,922,257 + +0.0 1,922,257 + -0.9 1,922,258 - -0.3 1,922,258 - +0.4 1,922,322 + A4249_RS09640 0.17 +0.4 1,922,323 - A4249_RS09640 0.18 -0.3 1,922,323 - A4249_RS09640 0.18 +0.4 1,922,430 + A4249_RS09640 0.43 -0.3 1,922,431 - A4249_RS09640 0.43 -0.3 1,922,462 + A4249_RS09640 0.50 -0.1 1,922,462 + A4249_RS09640 0.50 +1.0 1,922,462 + A4249_RS09640 0.50 +0.6 1,922,463 - A4249_RS09640 0.50 -1.7 1,922,463 - A4249_RS09640 0.50 +0.6 1,922,703 + -1.6 1,922,856 - A4249_RS09645 0.34 +0.1 1,922,960 + A4249_RS09645 0.54 -0.2 1,922,960 + A4249_RS09645 0.54 +1.3 1,922,961 - A4249_RS09645 0.55 -1.3 1,923,128 + A4249_RS09645 0.88 -0.4 1,923,128 + A4249_RS09645 0.88 -0.2 1,923,202 + +0.6 1,923,202 + +0.2 1,923,202 + +0.5 1,923,203 - +0.4 1,923,203 - -1.4 1,923,203 - +0.1 1,923,203 - +0.2 1,923,249 + +0.2 1,923,249 + +0.1 1,923,250 - +0.2 1,923,250 - -0.1 1,923,250 - -0.3 1,923,250 - +0.6 1,923,369 + -0.0 1,923,369 + +1.0 1,923,370 - -0.1 1,923,370 - +1.2 1,923,370 - +0.6 1,923,378 + +0.1 1,923,378 + +0.3 1,923,378 + -0.5 1,923,379 - +0.0 1,923,379 - +0.1 1,923,379 - -0.5 1,923,379 - -0.3 1,923,379 - +0.6 1,923,379 - +0.2 1,923,379 - -0.6 1,923,570 + A4249_RS09650 0.19 +1.3 1,923,570 + A4249_RS09650 0.19 +0.3 1,923,570 + A4249_RS09650 0.19 -0.6 1,923,571 - A4249_RS09650 0.19 -0.3 1,923,571 - A4249_RS09650 0.19 -0.2 1,923,572 + A4249_RS09650 0.19 -0.3 1,923,572 + A4249_RS09650 0.19 +1.0 1,923,572 + A4249_RS09650 0.19 -0.4 1,923,572 + A4249_RS09650 0.19 -1.0 1,923,572 + A4249_RS09650 0.19 -0.8 1,923,572 + A4249_RS09650 0.19 +0.2 1,923,572 + A4249_RS09650 0.19 -0.8 1,923,573 - A4249_RS09650 0.19 -0.1 1,923,573 - A4249_RS09650 0.19 +1.1 1,923,573 - A4249_RS09650 0.19 +0.7 1,923,573 - A4249_RS09650 0.19 -0.6 1,923,603 + A4249_RS09650 0.20 -0.0 1,923,603 + A4249_RS09650 0.20 +0.5 1,923,603 + A4249_RS09650 0.20 +1.1 1,923,604 - A4249_RS09650 0.21 -0.3 1,923,661 - A4249_RS09650 0.24 -0.9 1,923,661 - A4249_RS09650 0.24 +0.2 1,923,661 - A4249_RS09650 0.24 -1.6 1,923,661 - A4249_RS09650 0.24 -0.3 1,923,661 - A4249_RS09650 0.24 +0.3
Or see this region's nucleotide sequence