Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07970

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,596,498	+		A4249_RS07965	0.52	-1.0
1,596,498	+		A4249_RS07965	0.52	+0.1
1,596,498	+		A4249_RS07965	0.52	-1.0
1,596,498	+		A4249_RS07965	0.52	+0.2
1,596,498	+		A4249_RS07965	0.52	+0.2
1,596,498	+		A4249_RS07965	0.52	+1.3
1,596,498	+		A4249_RS07965	0.52	+0.6
1,596,499	-		A4249_RS07965	0.52	-0.1
1,596,499	-		A4249_RS07965	0.52	-0.4
1,596,499	-		A4249_RS07965	0.52	-1.1
1,596,499	-		A4249_RS07965	0.52	-0.1
1,596,499	-		A4249_RS07965	0.52	+0.6
1,596,499	-		A4249_RS07965	0.52	+0.0
1,596,499	-		A4249_RS07965	0.52	+0.1
1,596,499	-		A4249_RS07965	0.52	+0.5
1,596,499	-		A4249_RS07965	0.52	-1.2
1,596,499	-		A4249_RS07965	0.52	+0.6
1,596,690	+		A4249_RS07965	0.64	-1.2
1,596,690	+		A4249_RS07965	0.64	-0.3
1,596,691	-		A4249_RS07965	0.64	+1.3
1,596,691	-		A4249_RS07965	0.64	+0.8
1,596,691	-		A4249_RS07965	0.64	-1.2
1,596,729	+		A4249_RS07965	0.66	+0.1
1,596,729	+		A4249_RS07965	0.66	-0.7
1,596,729	+		A4249_RS07965	0.66	+0.3
1,596,729	+		A4249_RS07965	0.66	+0.6
1,596,729	+		A4249_RS07965	0.66	+0.3
1,596,729	+		A4249_RS07965	0.66	-0.2
1,596,730	-		A4249_RS07965	0.66	+0.2
1,596,730	-		A4249_RS07965	0.66	+1.0
1,596,730	-		A4249_RS07965	0.66	+0.0
1,596,730	-		A4249_RS07965	0.66	-1.3
1,596,807	+		A4249_RS07965	0.71	-0.2
1,596,807	+		A4249_RS07965	0.71	+0.1
1,596,807	+		A4249_RS07965	0.71	+0.3
1,596,808	-		A4249_RS07965	0.71	+0.6
1,596,808	-		A4249_RS07965	0.71	+0.5
1,596,808	-		A4249_RS07965	0.71	+0.4
1,596,808	-		A4249_RS07965	0.71	+0.6
1,596,841	+		A4249_RS07965	0.73	-0.3
1,596,842	-		A4249_RS07965	0.73	-0.3
1,596,842	-		A4249_RS07965	0.73	+0.4
1,596,859	+		A4249_RS07965	0.74	+0.9
1,596,859	+		A4249_RS07965	0.74	+0.1
1,596,859	+		A4249_RS07965	0.74	+1.3
1,596,886	+		A4249_RS07965	0.76	+0.5
1,596,886	+		A4249_RS07965	0.76	+0.5
1,596,886	+		A4249_RS07965	0.76	+0.2
1,596,887	-		A4249_RS07965	0.76	+0.3
1,596,887	-		A4249_RS07965	0.76	+0.5
1,596,966	+		A4249_RS07965	0.81	+0.6
1,596,966	+		A4249_RS07965	0.81	-0.1
1,596,967	-		A4249_RS07965	0.81	-0.5
1,596,967	-		A4249_RS07965	0.81	-0.2
1,596,967	-		A4249_RS07965	0.81	+0.2
1,596,967	-		A4249_RS07965	0.81	-0.1
1,596,967	-		A4249_RS07965	0.81	-1.6
1,597,035	+		A4249_RS07965	0.85	+0.4
1,597,036	-		A4249_RS07965	0.85	+0.2
1,597,048	+		A4249_RS07965	0.86	+0.1
1,597,049	-		A4249_RS07965	0.86	+0.1
1,597,049	-		A4249_RS07965	0.86	+0.5
1,597,049	-		A4249_RS07965	0.86	+1.9
1,597,060	+		A4249_RS07965	0.86	+0.1
1,597,155	+				-0.1
1,597,155	+				-1.9
1,597,155	+				+0.4
1,597,155	+				-0.2
1,597,156	-				+0.4
1,597,156	-				+0.7
1,597,284	+				+0.5
1,597,284	+				+0.2
1,597,284	+				+0.4
1,597,285	-				+0.2
1,597,335	+				-0.2
1,597,335	+				-0.0
1,597,336	-				+1.4
1,597,425	+				-0.2
1,597,425	+				-0.1
1,597,425	+				-1.6
1,597,426	-				-1.3
1,597,445	+				-0.2
1,597,445	+				+0.1
1,597,445	+				+0.3
1,597,446	-				+0.8
1,597,446	-				+0.4
1,597,446	-				+0.2
1,597,446	-				+0.1
1,597,446	-				+0.1
1,597,446	-				-0.0
1,597,446	-				-1.0
1,597,552	+		A4249_RS07970	0.18	-0.7
1,597,552	+		A4249_RS07970	0.18	-0.5
1,597,552	+		A4249_RS07970	0.18	+0.1
1,597,552	+		A4249_RS07970	0.18	+0.6
1,597,552	+		A4249_RS07970	0.18	-0.2
1,597,552	+		A4249_RS07970	0.18	-0.6
1,597,552	+		A4249_RS07970	0.18	+0.5
1,597,552	+		A4249_RS07970	0.18	+0.7
1,597,552	+		A4249_RS07970	0.18	-0.9
1,597,552	+		A4249_RS07970	0.18	+0.0
1,597,552	+		A4249_RS07970	0.18	+0.4
1,597,552	+		A4249_RS07970	0.18	-0.0
1,597,552	+		A4249_RS07970	0.18	-0.8
1,597,552	+		A4249_RS07970	0.18	+0.3
1,597,552	+		A4249_RS07970	0.18	+0.5
1,597,552	+		A4249_RS07970	0.18	+0.2
1,597,553	-		A4249_RS07970	0.18	+0.5
1,597,553	-		A4249_RS07970	0.18	+0.1
1,597,553	-		A4249_RS07970	0.18	-0.6
1,597,553	-		A4249_RS07970	0.18	+0.5
1,597,553	-		A4249_RS07970	0.18	+1.4
1,597,553	-		A4249_RS07970	0.18	-0.1
1,597,553	-		A4249_RS07970	0.18	-1.0
1,597,555	+		A4249_RS07970	0.18	-0.2
1,597,555	+		A4249_RS07970	0.18	-0.1
1,597,555	+		A4249_RS07970	0.18	+1.0
1,597,555	+		A4249_RS07970	0.18	-0.1
1,597,556	-		A4249_RS07970	0.18	-0.4
1,597,556	-		A4249_RS07970	0.18	-0.3
1,597,556	-		A4249_RS07970	0.18	+0.1
1,597,556	-		A4249_RS07970	0.18	+0.2
1,597,556	-		A4249_RS07970	0.18	-0.2
1,597,556	-		A4249_RS07970	0.18	-0.1
1,597,556	-		A4249_RS07970	0.18	-0.1
1,597,556	-		A4249_RS07970	0.18	+0.7
1,597,556	-		A4249_RS07970	0.18	+0.3
1,597,557	+		A4249_RS07970	0.18	+1.0
1,597,557	+		A4249_RS07970	0.18	+0.7
1,597,557	+		A4249_RS07970	0.18	+0.2
1,597,557	+		A4249_RS07970	0.18	+0.1
1,597,557	+		A4249_RS07970	0.18	+0.5
1,597,557	+		A4249_RS07970	0.18	-0.4
1,597,557	+		A4249_RS07970	0.18	-1.0
1,597,557	+		A4249_RS07970	0.18	+1.4
1,597,557	+		A4249_RS07970	0.18	+0.4
1,597,557	+		A4249_RS07970	0.18	-1.0
1,597,557	+		A4249_RS07970	0.18	+1.2
1,597,558	-		A4249_RS07970	0.19	-2.0
1,597,558	-		A4249_RS07970	0.19	-0.2
1,597,558	-		A4249_RS07970	0.19	+0.1
1,597,558	-		A4249_RS07970	0.19	+0.2
1,597,558	-		A4249_RS07970	0.19	+0.4
1,597,558	-		A4249_RS07970	0.19	-0.1
1,597,558	-		A4249_RS07970	0.19	-0.4
1,597,558	-		A4249_RS07970	0.19	+0.1
1,597,690	+		A4249_RS07970	0.39	-0.0
1,597,690	+		A4249_RS07970	0.39	+0.3
1,597,690	+		A4249_RS07970	0.39	+1.3
1,597,690	+		A4249_RS07970	0.39	+0.0
1,597,690	+		A4249_RS07970	0.39	+0.0
1,597,690	+		A4249_RS07970	0.39	-0.4
1,597,690	+		A4249_RS07970	0.39	+0.1
1,597,691	-		A4249_RS07970	0.39	+0.2
1,597,691	-		A4249_RS07970	0.39	-0.2
1,597,691	-		A4249_RS07970	0.39	-0.7
1,597,691	-		A4249_RS07970	0.39	+0.2
1,597,691	-		A4249_RS07970	0.39	+0.1
1,597,909	+		A4249_RS07970	0.73	+0.8
1,597,910	-		A4249_RS07970	0.73	+0.4
1,597,910	-		A4249_RS07970	0.73	-0.2
1,598,083	+				+0.5
1,598,084	-				+0.9
1,598,095	+				+0.3
1,598,095	+				+0.5
1,598,095	+				-0.5
1,598,095	+				+0.8
1,598,095	+				-1.0
1,598,095	+				-0.1
1,598,095	+				+0.9
1,598,095	+				-0.2
1,598,095	+				+0.3
1,598,095	+				+1.8
1,598,095	+				+0.7
1,598,095	+				-0.5
1,598,095	+				+1.3
1,598,095	+				+0.6
1,598,095	+				-0.7
1,598,095	+				+0.0
1,598,096	-				+0.8
1,598,096	-				-0.5
1,598,096	-				-0.5
1,598,096	-				+1.1
1,598,096	-				+0.6
1,598,096	-				+0.2
1,598,096	-				-0.0
1,598,096	-				-0.3
1,598,096	-				+0.3
1,598,096	-				-0.8
1,598,096	-				+1.0
1,598,096	-				-0.4
1,598,096	-				-0.3
1,598,096	-				+0.9
1,598,096	-				-0.6
1,598,114	+				+1.0
1,598,114	+				+0.4
1,598,114	+				+0.3
1,598,114	+				+0.3
1,598,114	+				-1.0
1,598,114	+				-0.6
1,598,114	+				-2.0
1,598,115	-				-0.3
1,598,115	-				-0.9
1,598,115	-				+0.1
1,598,115	-				+0.4
1,598,115	-				-2.9
1,598,115	-				-0.0
1,598,115	-				+0.9
1,598,115	-				+0.7
1,598,115	-				+0.0
1,598,115	-				+0.4
1,598,115	-				+0.0
1,598,115	-				+0.0
1,598,115	-				-0.4
1,598,115	-				-0.6
1,598,118	+				+0.3
1,598,119	-				+0.2
1,598,119	-				+0.1
1,598,119	-				+0.4
1,598,119	-				-0.6
1,598,119	-				+0.0
1,598,183	+				+0.7
1,598,183	+				+0.7
1,598,183	+				+0.5
1,598,183	+				-0.2
1,598,184	-				-0.3
1,598,184	-				+0.9
1,598,184	-				-2.4
1,598,212	+				+0.3
1,598,212	+				-0.2
1,598,212	+				-0.0
1,598,212	+				+0.2
1,598,213	-				-1.0
1,598,213	-				+1.8
1,598,213	-				+0.6
1,598,213	-				-0.3