Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07675

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,528,320	+		A4249_RS07670	0.27	-0.2
1,528,320	+		A4249_RS07670	0.27	+0.3
1,528,320	+		A4249_RS07670	0.27	-0.6
1,528,321	-		A4249_RS07670	0.27	+0.8
1,528,365	+		A4249_RS07670	0.31	+0.3
1,528,365	+		A4249_RS07670	0.31	+0.2
1,528,365	+		A4249_RS07670	0.31	+0.2
1,528,365	+		A4249_RS07670	0.31	-0.8
1,528,366	-		A4249_RS07670	0.31	+0.8
1,528,395	+		A4249_RS07670	0.34	-0.2
1,528,395	+		A4249_RS07670	0.34	-0.1
1,528,395	+		A4249_RS07670	0.34	+0.5
1,528,396	-		A4249_RS07670	0.34	+0.3
1,528,396	-		A4249_RS07670	0.34	-0.2
1,528,545	+		A4249_RS07670	0.49	+0.2
1,528,546	-		A4249_RS07670	0.49	-0.8
1,528,546	-		A4249_RS07670	0.49	+0.4
1,528,546	-		A4249_RS07670	0.49	+1.3
1,528,570	+		A4249_RS07670	0.51	+0.5
1,528,571	-		A4249_RS07670	0.51	-0.2
1,528,571	-		A4249_RS07670	0.51	-0.4
1,528,571	-		A4249_RS07670	0.51	-0.6
1,528,784	+		A4249_RS07670	0.71	-0.8
1,528,868	+		A4249_RS07670	0.80	-0.2
1,528,868	+		A4249_RS07670	0.80	+0.4
1,528,868	+		A4249_RS07670	0.80	-0.2
1,528,868	+		A4249_RS07670	0.80	+0.6
1,528,869	-		A4249_RS07670	0.80	-0.7
1,528,869	-		A4249_RS07670	0.80	+0.7
1,528,869	-		A4249_RS07670	0.80	+0.1
1,529,038	+				-0.1
1,529,038	+				-0.3
1,529,039	-				-0.4
1,529,039	-				-0.2
1,529,204	+				+0.8
1,529,205	-				-0.5
1,529,415	+		A4249_RS07675	0.11	+0.5
1,529,416	-		A4249_RS07675	0.11	-0.1
1,529,416	-		A4249_RS07675	0.11	-0.4
1,529,427	+		A4249_RS07675	0.11	-0.1
1,529,427	+		A4249_RS07675	0.11	-2.2
1,529,427	+		A4249_RS07675	0.11	+1.2
1,529,427	+		A4249_RS07675	0.11	-1.4
1,529,428	-		A4249_RS07675	0.11	+0.1
1,529,428	-		A4249_RS07675	0.11	+0.6
1,529,428	-		A4249_RS07675	0.11	-1.3
1,529,428	-		A4249_RS07675	0.11	+0.7
1,529,428	-		A4249_RS07675	0.11	+0.8
1,529,428	-		A4249_RS07675	0.11	+0.4
1,529,535	+		A4249_RS07675	0.18	-0.1
1,529,535	+		A4249_RS07675	0.18	-0.3
1,529,536	-		A4249_RS07675	0.18	+0.7
1,529,536	-		A4249_RS07675	0.18	+0.2
1,529,560	-		A4249_RS07675	0.19	+0.4
1,529,562	+		A4249_RS07675	0.20	+0.6
1,529,563	-		A4249_RS07675	0.20	+0.0
1,529,563	-		A4249_RS07675	0.20	-0.2
1,529,563	-		A4249_RS07675	0.20	-0.1
1,529,563	-		A4249_RS07675	0.20	-0.0
1,529,563	-		A4249_RS07675	0.20	-1.0
1,529,628	+		A4249_RS07675	0.24	-1.4
1,529,628	+		A4249_RS07675	0.24	-0.2
1,529,628	+		A4249_RS07675	0.24	+0.8
1,529,628	+		A4249_RS07675	0.24	-0.0
1,529,628	+		A4249_RS07675	0.24	+1.1
1,529,628	+		A4249_RS07675	0.24	-0.9
1,529,628	+		A4249_RS07675	0.24	+0.6
1,529,628	+		A4249_RS07675	0.24	+0.6
1,529,629	-		A4249_RS07675	0.24	+1.1
1,529,629	-		A4249_RS07675	0.24	-0.1
1,529,629	-		A4249_RS07675	0.24	-0.4
1,529,629	-		A4249_RS07675	0.24	+0.4
1,529,629	-		A4249_RS07675	0.24	+0.0
1,529,629	-		A4249_RS07675	0.24	-0.3
1,529,629	-		A4249_RS07675	0.24	+0.1
1,529,629	-		A4249_RS07675	0.24	-0.2
1,529,670	+		A4249_RS07675	0.26	-0.2
1,529,718	+		A4249_RS07675	0.29	-0.1
1,529,718	+		A4249_RS07675	0.29	-1.1
1,529,718	+		A4249_RS07675	0.29	+0.3
1,529,718	+		A4249_RS07675	0.29	-0.6
1,529,718	+		A4249_RS07675	0.29	+1.4
1,529,718	+		A4249_RS07675	0.29	-1.2
1,529,718	+		A4249_RS07675	0.29	-0.6
1,529,718	+		A4249_RS07675	0.29	+0.4
1,529,719	-		A4249_RS07675	0.29	-0.3
1,529,719	-		A4249_RS07675	0.29	+0.8
1,529,721	+		A4249_RS07675	0.29	-2.1
1,529,721	+		A4249_RS07675	0.29	-1.8
1,529,722	-		A4249_RS07675	0.29	+0.5
1,529,784	+		A4249_RS07675	0.33	+0.3
1,529,784	+		A4249_RS07675	0.33	-0.0
1,529,784	+		A4249_RS07675	0.33	-0.0
1,529,785	-		A4249_RS07675	0.33	+0.3
1,529,785	-		A4249_RS07675	0.33	+0.8
1,529,785	-		A4249_RS07675	0.33	-1.0
1,529,785	-		A4249_RS07675	0.33	-1.3
1,529,785	-		A4249_RS07675	0.33	-0.8
1,529,785	-		A4249_RS07675	0.33	-0.7
1,529,808	+		A4249_RS07675	0.34	+0.2
1,529,808	+		A4249_RS07675	0.34	-0.2
1,529,808	+		A4249_RS07675	0.34	+0.1
1,529,809	-		A4249_RS07675	0.35	+0.2
1,529,809	-		A4249_RS07675	0.35	-1.3
1,529,809	-		A4249_RS07675	0.35	+0.4
1,529,856	+		A4249_RS07675	0.37	+0.5
1,529,856	+		A4249_RS07675	0.37	+0.5
1,529,856	+		A4249_RS07675	0.37	-0.6
1,529,857	-		A4249_RS07675	0.37	+0.1
1,529,884	-		A4249_RS07675	0.39	+0.8
1,529,925	+		A4249_RS07675	0.42	-0.4
1,529,925	+		A4249_RS07675	0.42	-0.3
1,529,925	+		A4249_RS07675	0.42	+0.4
1,529,926	-		A4249_RS07675	0.42	-1.0
1,529,926	-		A4249_RS07675	0.42	-0.7
1,529,927	+		A4249_RS07675	0.42	+0.6
1,529,927	+		A4249_RS07675	0.42	+0.3
1,529,927	+		A4249_RS07675	0.42	-0.0
1,529,927	+		A4249_RS07675	0.42	+0.1
1,529,927	+		A4249_RS07675	0.42	-0.0
1,529,927	+		A4249_RS07675	0.42	+0.2
1,529,928	-		A4249_RS07675	0.42	-1.7
1,529,928	-		A4249_RS07675	0.42	-0.5
1,529,928	-		A4249_RS07675	0.42	-0.8
1,529,928	-		A4249_RS07675	0.42	+0.1
1,529,928	-		A4249_RS07675	0.42	+0.6
1,529,928	-		A4249_RS07675	0.42	-0.8
1,529,928	-		A4249_RS07675	0.42	-0.2
1,529,928	-		A4249_RS07675	0.42	+0.2
1,529,928	-		A4249_RS07675	0.42	+0.0
1,529,928	-		A4249_RS07675	0.42	+0.2
1,529,928	-		A4249_RS07675	0.42	-0.9
1,529,934	+		A4249_RS07675	0.42	+0.1
1,529,934	+		A4249_RS07675	0.42	+0.4
1,529,934	+		A4249_RS07675	0.42	+1.1
1,529,934	+		A4249_RS07675	0.42	-0.7
1,529,985	+		A4249_RS07675	0.45	-0.2
1,529,985	+		A4249_RS07675	0.45	+0.6
1,529,985	+		A4249_RS07675	0.45	+0.5
1,529,985	+		A4249_RS07675	0.45	+0.7
1,529,985	+		A4249_RS07675	0.45	+0.3
1,529,985	+		A4249_RS07675	0.45	-0.6
1,529,985	+		A4249_RS07675	0.45	+0.7
1,529,985	+		A4249_RS07675	0.45	+0.1
1,529,985	+		A4249_RS07675	0.45	+1.0
1,529,985	+		A4249_RS07675	0.45	-1.0
1,529,985	+		A4249_RS07675	0.45	+0.3
1,529,985	+		A4249_RS07675	0.45	-0.8
1,529,986	-		A4249_RS07675	0.45	-0.2
1,529,986	-		A4249_RS07675	0.45	-0.5
1,529,986	-		A4249_RS07675	0.45	+0.1
1,529,986	-		A4249_RS07675	0.45	+0.5
1,529,986	-		A4249_RS07675	0.45	+0.1
1,529,986	-		A4249_RS07675	0.45	-0.7
1,529,986	-		A4249_RS07675	0.45	-0.3
1,529,986	-		A4249_RS07675	0.45	-1.0
1,529,986	-		A4249_RS07675	0.45	+1.3
1,529,986	-		A4249_RS07675	0.45	-0.4
1,529,986	-		A4249_RS07675	0.45	+0.3
1,529,991	+		A4249_RS07675	0.46	-0.2
1,529,992	-		A4249_RS07675	0.46	-0.9
1,529,992	-		A4249_RS07675	0.46	+0.0
1,530,213	+		A4249_RS07675	0.59	-0.3
1,530,213	+		A4249_RS07675	0.59	+0.7
1,530,213	+		A4249_RS07675	0.59	-0.3
1,530,213	+		A4249_RS07675	0.59	+0.2
1,530,213	+		A4249_RS07675	0.59	-0.2
1,530,213	+		A4249_RS07675	0.59	-0.0
1,530,213	+		A4249_RS07675	0.59	+0.1
1,530,214	-		A4249_RS07675	0.59	+0.8
1,530,237	+		A4249_RS07675	0.61	-0.2
1,530,237	+		A4249_RS07675	0.61	+0.2
1,530,237	+		A4249_RS07675	0.61	+0.4
1,530,238	-		A4249_RS07675	0.61	-0.5
1,530,357	+		A4249_RS07675	0.68	+0.6
1,530,357	+		A4249_RS07675	0.68	+0.1
1,530,358	-		A4249_RS07675	0.68	-0.2
1,530,358	-		A4249_RS07675	0.68	-0.5
1,530,358	-		A4249_RS07675	0.68	+0.1
1,530,358	-		A4249_RS07675	0.68	+0.8
1,530,396	+		A4249_RS07675	0.70	-0.1
1,530,397	-		A4249_RS07675	0.70	-0.9
1,530,397	-		A4249_RS07675	0.70	-0.5
1,530,399	+		A4249_RS07675	0.70	+0.3
1,530,399	+		A4249_RS07675	0.70	+0.0
1,530,399	+		A4249_RS07675	0.70	+0.8
1,530,400	-		A4249_RS07675	0.70	-0.1
1,530,400	-		A4249_RS07675	0.70	+0.5
1,530,400	-		A4249_RS07675	0.70	-0.6
1,530,436	-		A4249_RS07675	0.73	+0.0
1,530,436	-		A4249_RS07675	0.73	+0.7
1,530,481	-		A4249_RS07675	0.75	-0.2
1,530,553	+		A4249_RS07675	0.80	+0.1
1,530,567	+		A4249_RS07675	0.81	+0.9
1,530,567	+		A4249_RS07675	0.81	-0.6
1,530,567	+		A4249_RS07675	0.81	+0.6
1,530,567	+		A4249_RS07675	0.81	-0.2
1,530,567	+		A4249_RS07675	0.81	-0.3
1,530,568	-		A4249_RS07675	0.81	-0.9
1,530,568	-		A4249_RS07675	0.81	+0.2
1,530,568	-		A4249_RS07675	0.81	-0.6
1,530,568	-		A4249_RS07675	0.81	-2.2
1,530,568	-		A4249_RS07675	0.81	-0.2
1,530,717	+		A4249_RS07675	0.90	+0.5
1,530,718	-		A4249_RS07675	0.90	+0.0
1,530,718	-		A4249_RS07675	0.90	-0.3
1,530,742	+				-1.6
1,530,743	-				-0.9
1,530,798	+				+0.7
1,530,798	+				+0.0
1,530,798	+				+0.6
1,530,799	-				-0.8
1,530,799	-				+0.5
1,530,799	-				+0.3
1,530,799	-				-1.6
1,530,799	-				+0.1
1,530,799	-				-1.0
1,530,804	-				-0.2
1,530,882	+				+0.2
1,530,882	+				-1.9
1,530,882	+				-0.6
1,530,882	+				-0.3
1,530,883	-				-0.1
1,530,883	-				+0.5
1,530,883	-				+0.7
1,531,078	+		A4249_RS07680	0.12	-0.5
1,531,078	+		A4249_RS07680	0.12	-0.2
1,531,078	+		A4249_RS07680	0.12	+0.5
1,531,078	+		A4249_RS07680	0.12	-0.2
1,531,078	+		A4249_RS07680	0.12	-0.1
1,531,078	+		A4249_RS07680	0.12	+0.4
1,531,078	+		A4249_RS07680	0.12	+0.0
1,531,078	+		A4249_RS07680	0.12	-1.6
1,531,079	-		A4249_RS07680	0.12	-0.2
1,531,079	-		A4249_RS07680	0.12	+0.7
1,531,079	-		A4249_RS07680	0.12	+0.8
1,531,079	-		A4249_RS07680	0.12	-0.3
1,531,079	-		A4249_RS07680	0.12	-0.0
1,531,079	-		A4249_RS07680	0.12	+0.1
1,531,420	+		A4249_RS07680	0.42	-0.6
1,531,420	+		A4249_RS07680	0.42	-0.4
1,531,421	-		A4249_RS07680	0.42	+0.4
1,531,421	-		A4249_RS07680	0.42	-0.1
1,531,421	-		A4249_RS07680	0.42	+0.9
1,531,421	-		A4249_RS07680	0.42	-0.1
1,531,450	+		A4249_RS07680	0.45	-2.7
1,531,450	+		A4249_RS07680	0.45	-0.6
1,531,450	+		A4249_RS07680	0.45	+0.2
1,531,450	+		A4249_RS07680	0.45	+0.5
1,531,451	-		A4249_RS07680	0.45	-0.6
1,531,451	-		A4249_RS07680	0.45	+0.4
1,531,607	+		A4249_RS07680	0.58	-1.4
1,531,608	-		A4249_RS07680	0.58	+0.2
1,531,608	-		A4249_RS07680	0.58	-0.3
1,531,608	-		A4249_RS07680	0.58	+0.1
1,531,693	+		A4249_RS07680	0.66	-0.3
1,531,693	+		A4249_RS07680	0.66	+1.3
1,531,693	+		A4249_RS07680	0.66	-0.1
1,531,693	+		A4249_RS07680	0.66	-0.3
1,531,693	+		A4249_RS07680	0.66	+0.4
1,531,693	+		A4249_RS07680	0.66	+0.2
1,531,693	+		A4249_RS07680	0.66	+0.3
1,531,693	+		A4249_RS07680	0.66	-0.8
1,531,693	+		A4249_RS07680	0.66	+0.5
1,531,693	+		A4249_RS07680	0.66	-0.5
1,531,693	+		A4249_RS07680	0.66	+0.1
1,531,694	-		A4249_RS07680	0.66	-0.6
1,531,694	-		A4249_RS07680	0.66	-1.1
1,531,694	-		A4249_RS07680	0.66	+0.5
1,531,694	-		A4249_RS07680	0.66	+0.4
1,531,694	-		A4249_RS07680	0.66	-0.3
1,531,694	-		A4249_RS07680	0.66	-0.5
1,531,694	-		A4249_RS07680	0.66	-0.4
1,531,694	-		A4249_RS07680	0.66	-0.0
1,531,828	+		A4249_RS07680	0.78	-1.0
1,531,828	+		A4249_RS07680	0.78	-0.4
1,531,828	+		A4249_RS07680	0.78	+0.6
1,531,828	+		A4249_RS07680	0.78	+0.2
1,531,828	+		A4249_RS07680	0.78	-1.9
1,531,828	+		A4249_RS07680	0.78	+0.3
1,531,828	+		A4249_RS07680	0.78	-1.4
1,531,828	+		A4249_RS07680	0.78	-0.5
1,531,828	+		A4249_RS07680	0.78	+0.6
1,531,828	+		A4249_RS07680	0.78	-0.7
1,531,828	+		A4249_RS07680	0.78	-0.6
1,531,828	+		A4249_RS07680	0.78	+0.5
1,531,828	+		A4249_RS07680	0.78	-0.1
1,531,828	+		A4249_RS07680	0.78	-0.2
1,531,828	+		A4249_RS07680	0.78	+0.2
1,531,828	+		A4249_RS07680	0.78	-0.0
1,531,828	+		A4249_RS07680	0.78	+0.8
1,531,829	-		A4249_RS07680	0.78	-0.3
1,531,829	-		A4249_RS07680	0.78	-0.1
1,531,829	-		A4249_RS07680	0.78	+0.6
1,531,829	-		A4249_RS07680	0.78	-0.2
1,531,829	-		A4249_RS07680	0.78	+0.4
1,531,829	-		A4249_RS07680	0.78	+0.5
1,531,829	-		A4249_RS07680	0.78	-1.6
1,531,829	-		A4249_RS07680	0.78	+0.2
1,531,829	-		A4249_RS07680	0.78	-0.1
1,531,829	-		A4249_RS07680	0.78	-0.5
1,531,829	-		A4249_RS07680	0.78	-0.8
1,531,829	-		A4249_RS07680	0.78	+2.0
1,531,829	-		A4249_RS07680	0.78	+0.8
1,531,829	-		A4249_RS07680	0.78	-1.9
1,531,829	-		A4249_RS07680	0.78	-1.8
1,531,829	-		A4249_RS07680	0.78	-0.5
1,531,829	-		A4249_RS07680	0.78	+0.7
1,531,829	-		A4249_RS07680	0.78	-1.2
1,531,829	-		A4249_RS07680	0.78	-0.5
1,531,829	-		A4249_RS07680	0.78	-0.5
1,531,829	-		A4249_RS07680	0.78	+0.1
1,531,829	-		A4249_RS07680	0.78	+0.2