Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07500

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,499,942	+		A4249_RS07495	0.53	-0.9
1,499,942	+		A4249_RS07495	0.53	-0.6
1,499,942	+		A4249_RS07495	0.53	+0.4
1,499,943	-		A4249_RS07495	0.53	-0.5
1,499,943	-		A4249_RS07495	0.53	-0.2
1,499,943	-		A4249_RS07495	0.53	+0.1
1,499,943	-		A4249_RS07495	0.53	-0.2
1,499,943	-		A4249_RS07495	0.53	+0.3
1,500,021	+		A4249_RS07495	0.58	-0.5
1,500,022	-		A4249_RS07495	0.58	+0.0
1,500,162	+		A4249_RS07495	0.66	-0.5
1,500,162	+		A4249_RS07495	0.66	-0.2
1,500,162	+		A4249_RS07495	0.66	-0.2
1,500,162	+		A4249_RS07495	0.66	-0.3
1,500,162	+		A4249_RS07495	0.66	-0.7
1,500,163	-		A4249_RS07495	0.66	+0.2
1,500,163	-		A4249_RS07495	0.66	+0.1
1,500,163	-		A4249_RS07495	0.66	-0.3
1,500,163	-		A4249_RS07495	0.66	-0.9
1,500,195	+		A4249_RS07495	0.68	+0.0
1,500,195	+		A4249_RS07495	0.68	-0.1
1,500,195	+		A4249_RS07495	0.68	-0.5
1,500,195	+		A4249_RS07495	0.68	+0.3
1,500,195	+		A4249_RS07495	0.68	+0.7
1,500,195	+		A4249_RS07495	0.68	-0.0
1,500,195	+		A4249_RS07495	0.68	-0.1
1,500,196	-		A4249_RS07495	0.68	-0.0
1,500,196	-		A4249_RS07495	0.68	-1.2
1,500,196	-		A4249_RS07495	0.68	+0.2
1,500,196	-		A4249_RS07495	0.68	-0.7
1,500,196	-		A4249_RS07495	0.68	+0.2
1,500,196	-		A4249_RS07495	0.68	-0.8
1,500,196	-		A4249_RS07495	0.68	-0.2
1,500,196	-		A4249_RS07495	0.68	-0.2
1,500,196	-		A4249_RS07495	0.68	-1.2
1,500,196	-		A4249_RS07495	0.68	-0.5
1,500,196	-		A4249_RS07495	0.68	-0.4
1,500,290	-		A4249_RS07495	0.73	-1.3
1,500,496	+		A4249_RS07495	0.85	-0.4
1,500,497	-		A4249_RS07495	0.85	-0.1
1,500,497	-		A4249_RS07495	0.85	+0.5
1,500,497	-		A4249_RS07495	0.85	-0.0
1,500,497	-		A4249_RS07495	0.85	+0.1
1,500,591	+				-0.2
1,500,591	+				-0.2
1,500,591	+				-0.8
1,500,592	-				+0.7
1,500,603	+				-0.2
1,500,603	+				+0.3
1,500,603	+				-0.6
1,500,603	+				+0.5
1,500,603	+				+0.5
1,500,603	+				+0.6
1,500,603	+				-0.9
1,500,603	+				-0.3
1,500,603	+				+0.7
1,500,603	+				+0.3
1,500,604	-				+0.8
1,500,604	-				+0.2
1,500,604	-				-0.1
1,500,703	+				-0.8
1,500,703	+				+0.6
1,500,703	+				+0.6
1,500,703	+				-0.2
1,500,703	+				+0.0
1,500,703	+				+0.1
1,500,704	-				+0.6
1,500,704	-				+0.1
1,500,704	-				-0.0
1,500,704	-				+0.1
1,500,704	-				-0.1
1,500,704	-				+2.6
1,500,710	+				+0.4
1,500,710	+				-0.3
1,500,747	+				+0.3
1,500,792	+				+0.5
1,500,793	-				-0.3
1,500,851	-		A4249_RS07500	0.11	-0.1
1,501,053	+		A4249_RS07500	0.33	-0.4
1,501,053	+		A4249_RS07500	0.33	+0.5
1,501,053	+		A4249_RS07500	0.33	-0.6
1,501,053	+		A4249_RS07500	0.33	+0.1
1,501,054	-		A4249_RS07500	0.33	-0.0
1,501,054	-		A4249_RS07500	0.33	-0.6
1,501,054	-		A4249_RS07500	0.33	-0.2
1,501,054	-		A4249_RS07500	0.33	-0.6
1,501,054	-		A4249_RS07500	0.33	-0.8
1,501,054	-		A4249_RS07500	0.33	+0.1
1,501,054	-		A4249_RS07500	0.33	+0.1
1,501,060	+		A4249_RS07500	0.34	-0.1
1,501,209	+		A4249_RS07500	0.50	-1.1
1,501,209	+		A4249_RS07500	0.50	-0.1
1,501,209	+		A4249_RS07500	0.50	+0.4
1,501,209	+		A4249_RS07500	0.50	+0.2
1,501,210	-		A4249_RS07500	0.50	-0.3
1,501,210	-		A4249_RS07500	0.50	+0.9
1,501,216	+		A4249_RS07500	0.51	-1.4
1,501,216	+		A4249_RS07500	0.51	-0.9
1,501,216	+		A4249_RS07500	0.51	-0.9
1,501,216	+		A4249_RS07500	0.51	+0.1
1,501,216	+		A4249_RS07500	0.51	+0.7
1,501,217	-		A4249_RS07500	0.51	-0.3
1,501,217	-		A4249_RS07500	0.51	-1.2
1,501,217	-		A4249_RS07500	0.51	-1.1
1,501,225	+		A4249_RS07500	0.52	-0.7
1,501,279	+		A4249_RS07500	0.58	-0.3
1,501,279	+		A4249_RS07500	0.58	+0.6
1,501,280	-		A4249_RS07500	0.58	+0.7
1,501,280	-		A4249_RS07500	0.58	+0.2
1,501,280	-		A4249_RS07500	0.58	-0.3
1,501,280	-		A4249_RS07500	0.58	+0.8
1,501,281	+		A4249_RS07500	0.58	-1.1
1,501,281	+		A4249_RS07500	0.58	-0.7
1,501,281	+		A4249_RS07500	0.58	+0.1
1,501,281	+		A4249_RS07500	0.58	-0.4
1,501,281	+		A4249_RS07500	0.58	-0.8
1,501,281	+		A4249_RS07500	0.58	-0.6
1,501,281	+		A4249_RS07500	0.58	+0.2
1,501,282	-		A4249_RS07500	0.58	+0.3
1,501,282	-		A4249_RS07500	0.58	+0.0
1,501,282	-		A4249_RS07500	0.58	+1.0
1,501,282	-		A4249_RS07500	0.58	-0.4
1,501,282	-		A4249_RS07500	0.58	+0.2
1,501,282	-		A4249_RS07500	0.58	+0.1
1,501,282	-		A4249_RS07500	0.58	-0.2
1,501,282	-		A4249_RS07500	0.58	+0.2
1,501,363	-		A4249_RS07500	0.67	-0.4
1,501,363	-		A4249_RS07500	0.67	+0.6
1,501,370	-		A4249_RS07500	0.68	+0.8
1,501,370	-		A4249_RS07500	0.68	-0.7
1,501,370	-		A4249_RS07500	0.68	-0.2
1,501,370	-		A4249_RS07500	0.68	-0.3
1,501,370	-		A4249_RS07500	0.68	-0.6
1,501,370	-		A4249_RS07500	0.68	-0.1
1,501,413	+		A4249_RS07500	0.72	-0.7
1,501,413	+		A4249_RS07500	0.72	+0.6
1,501,413	+		A4249_RS07500	0.72	-0.3
1,501,413	+		A4249_RS07500	0.72	-0.2
1,501,419	+		A4249_RS07500	0.73	+1.0
1,501,419	+		A4249_RS07500	0.73	+0.3
1,501,419	+		A4249_RS07500	0.73	+0.9
1,501,419	+		A4249_RS07500	0.73	+0.3
1,501,419	+		A4249_RS07500	0.73	+0.6
1,501,419	+		A4249_RS07500	0.73	-1.1
1,501,419	+		A4249_RS07500	0.73	-0.5
1,501,419	+		A4249_RS07500	0.73	+0.6
1,501,420	-		A4249_RS07500	0.73	-0.2
1,501,420	-		A4249_RS07500	0.73	+0.3
1,501,420	-		A4249_RS07500	0.73	-0.2
1,501,420	-		A4249_RS07500	0.73	-0.4
1,501,420	-		A4249_RS07500	0.73	+0.0
1,501,420	-		A4249_RS07500	0.73	-0.0
1,501,420	-		A4249_RS07500	0.73	-0.8
1,501,420	-		A4249_RS07500	0.73	-0.2
1,501,420	-		A4249_RS07500	0.73	-1.1
1,501,543	+		A4249_RS07500	0.87	-0.9
1,501,543	+		A4249_RS07500	0.87	-0.1
1,501,543	+		A4249_RS07500	0.87	+0.2
1,501,569	+		A4249_RS07500	0.89	-0.4
1,501,679	+				+1.1
1,501,688	+				+1.2
1,501,689	-				-0.8
1,501,689	-				-0.2
1,501,689	-				-0.4
1,501,689	-				-1.4
1,501,696	+				-0.4
1,501,757	-				+0.1
1,501,838	+				-0.1
1,501,838	+				+0.5
1,501,838	+				-0.8
1,501,839	-				+0.2
1,501,839	-				-0.6
1,501,839	-				+0.6
1,502,009	+		A4249_RS07505	0.59	-0.3
1,502,009	+		A4249_RS07505	0.59	-0.2
1,502,009	+		A4249_RS07505	0.59	+0.3
1,502,009	+		A4249_RS07505	0.59	+0.3
1,502,009	+		A4249_RS07505	0.59	+1.1
1,502,009	+		A4249_RS07505	0.59	-1.0
1,502,010	-		A4249_RS07505	0.59	-0.2
1,502,010	-		A4249_RS07505	0.59	-1.1
1,502,010	-		A4249_RS07505	0.59	-1.4
1,502,046	+		A4249_RS07505	0.72	-0.0
1,502,128	+				+0.4
1,502,128	+				-1.0
1,502,128	+				-0.3
1,502,128	+				+0.2
1,502,129	-				-0.0
1,502,129	-				-0.2
1,502,251	+				-1.0
1,502,251	+				+0.0
1,502,251	+				+0.5
1,502,274	+				-0.8
1,502,274	+				-2.0
1,502,274	+				-0.0
1,502,275	-				-0.2
1,502,275	-				-0.4
1,502,275	-				-0.1
1,502,275	-				-0.3
1,502,275	-				-0.2
1,502,275	-				+0.3
1,502,275	-				-0.1
1,502,275	-				-0.0
1,502,324	-				-1.0
1,502,343	-				+0.8
1,502,358	+				+0.1
1,502,358	+				+0.7
1,502,358	+				+0.5
1,502,359	-				-0.1
1,502,359	-				+0.4
1,502,359	-				-1.4
1,502,359	-				+0.0
1,502,421	+				+0.1
1,502,422	-				+0.2
1,502,451	+				-0.7
1,502,451	+				+0.6
1,502,451	+				+0.6
1,502,451	+				-0.2
1,502,451	+				+0.4
1,502,452	-				+0.3
1,502,452	-				+0.1
1,502,452	-				-0.3
1,502,452	-				-0.1
1,502,452	-				+0.1
1,502,452	-				-0.3
1,502,452	-				-0.4
1,502,452	-				-0.4
1,502,452	-				-0.2
1,502,489	+				-0.4
1,502,489	+				-0.6
1,502,489	+				-1.0
1,502,489	+				+0.2
1,502,490	-				+0.6
1,502,490	-				+0.3
1,502,576	-				-0.9
1,502,606	+				-0.5
1,502,606	+				+1.2
1,502,606	+				-0.0
1,502,606	+				-0.5
1,502,607	-				+0.5
1,502,607	-				-0.4
1,502,621	+				-0.3
1,502,621	+				-0.1
1,502,621	+				-0.0
1,502,621	+				-0.1
1,502,621	+				-0.0
1,502,621	+				-0.2
1,502,622	-				+1.0
1,502,622	-				+0.5
1,502,622	-				-1.2
1,502,622	-				-1.1