Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07090

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,422,425	+		A4249_RS07085	0.23	-1.0
1,422,425	+		A4249_RS07085	0.23	+0.4
1,422,425	+		A4249_RS07085	0.23	-0.0
1,422,425	+		A4249_RS07085	0.23	-0.2
1,422,426	-		A4249_RS07085	0.23	+0.2
1,422,426	-		A4249_RS07085	0.23	+0.0
1,422,426	-		A4249_RS07085	0.23	+1.0
1,422,426	-		A4249_RS07085	0.23	+0.9
1,422,449	+		A4249_RS07085	0.27	-0.5
1,422,449	+		A4249_RS07085	0.27	+0.0
1,422,449	+		A4249_RS07085	0.27	-1.2
1,422,450	-		A4249_RS07085	0.27	-0.1
1,422,450	-		A4249_RS07085	0.27	+0.6
1,422,450	-		A4249_RS07085	0.27	+0.1
1,422,450	-		A4249_RS07085	0.27	+0.5
1,422,450	-		A4249_RS07085	0.27	-0.6
1,422,450	-		A4249_RS07085	0.27	-1.1
1,422,494	+		A4249_RS07085	0.35	+0.2
1,422,495	-		A4249_RS07085	0.35	+0.9
1,422,495	-		A4249_RS07085	0.35	+0.0
1,422,495	-		A4249_RS07085	0.35	+0.2
1,422,495	-		A4249_RS07085	0.35	-0.1
1,422,618	+		A4249_RS07085	0.57	-0.1
1,422,618	+		A4249_RS07085	0.57	+0.1
1,422,619	-		A4249_RS07085	0.57	-0.2
1,422,619	-		A4249_RS07085	0.57	-0.3
1,422,619	-		A4249_RS07085	0.57	+0.3
1,422,619	-		A4249_RS07085	0.57	-0.1
1,422,791	+		A4249_RS07085	0.87	+0.3
1,422,791	+		A4249_RS07085	0.87	-0.8
1,422,791	+		A4249_RS07085	0.87	-0.1
1,422,791	+		A4249_RS07085	0.87	-1.2
1,422,792	-		A4249_RS07085	0.88	-0.6
1,422,983	+				-0.5
1,422,984	-				-0.4
1,423,008	+				-0.6
1,423,008	+				+0.3
1,423,008	+				-0.1
1,423,008	+				-0.2
1,423,008	+				-0.0
1,423,009	-				-0.3
1,423,009	-				-0.4
1,423,009	-				+0.5
1,423,033	-				+0.6
1,423,035	+				-0.4
1,423,035	+				-0.4
1,423,035	+				-1.1
1,423,036	-				-0.5
1,423,036	-				-1.2
1,423,072	+				-0.6
1,423,073	-				+0.3
1,423,073	-				+0.1
1,423,073	-				+0.1
1,423,073	-				-0.7
1,423,073	-				+0.1
1,423,278	+				-2.1
1,423,279	-				+0.4
1,423,279	-				-0.1
1,423,321	+				-0.2
1,423,321	+				-1.2
1,423,321	+				-0.4
1,423,321	+				+0.1
1,423,321	+				-1.1
1,423,321	+				-0.6
1,423,321	+				+0.4
1,423,321	+				-1.2
1,423,322	-				-1.4
1,423,322	-				-0.6
1,423,322	-				-0.5
1,423,322	-				-0.7
1,423,322	-				-0.2
1,423,322	-				+1.0
1,423,322	-				+1.1
1,423,391	+				+2.2
1,423,391	+				+1.4
1,423,391	+				-0.2
1,423,391	+				+0.4
1,423,391	+				-0.2
1,423,391	+				-0.5
1,423,392	-				+0.5
1,423,730	+		A4249_RS07090	0.79	-1.0
1,423,731	-		A4249_RS07090	0.80	-1.7
1,423,731	-		A4249_RS07090	0.80	+0.5
1,423,731	-		A4249_RS07090	0.80	-0.0
1,423,744	-		A4249_RS07090	0.82	-1.9
1,423,744	-		A4249_RS07090	0.82	-0.1
1,423,793	+				+0.2
1,423,793	+				-0.4
1,423,793	+				+0.4
1,423,793	+				-0.7
1,423,793	+				-0.2
1,423,793	+				+1.7
1,423,794	-				-0.1
1,423,794	-				-1.0
1,423,794	-				-0.5
1,423,794	-				-0.9
1,423,794	-				-0.1
1,423,794	-				-0.2
1,423,794	-				-0.2
1,423,794	-				-0.2
1,423,794	-				-0.2
1,423,794	-				-0.8
1,423,794	-				+0.6
1,423,821	-				-1.0
1,423,861	+				+0.8
1,423,861	+				+0.3
1,423,861	+				+1.4
1,423,862	-				+0.9
1,423,862	-				+0.4
1,423,862	-				-0.9
1,423,879	+				-0.1
1,423,879	+				-0.4
1,423,879	+				-1.2
1,423,879	+				-0.0
1,423,879	+				+0.1
1,423,879	+				-0.6
1,423,879	+				+0.0
1,423,879	+				-0.2
1,423,879	+				-0.4
1,423,879	+				-1.0
1,423,879	+				-0.4
1,423,880	-				+0.1
1,423,880	-				+0.0
1,423,880	-				-0.7
1,423,880	-				-1.0
1,423,880	-				+0.2
1,423,880	-				-0.1
1,423,880	-				-0.1
1,423,880	-				-0.6
1,423,880	-				-0.4
1,423,887	+				-0.3
1,423,887	+				-0.2
1,423,887	+				+0.4
1,423,887	+				-0.5
1,423,888	-				-0.1
1,423,888	-				-0.3
1,424,040	+				+0.3
1,424,041	-				+0.2
1,424,099	+		A4249_RS16785	0.13	+0.1
1,424,100	-		A4249_RS16785	0.13	-0.5
1,424,217	+		A4249_RS16785	0.21	-0.7
1,424,217	+		A4249_RS16785	0.21	+0.6
1,424,217	+		A4249_RS16785	0.21	+0.5
1,424,217	+		A4249_RS16785	0.21	+0.4
1,424,217	+		A4249_RS16785	0.21	-0.4
1,424,217	+		A4249_RS16785	0.21	-0.5
1,424,217	+		A4249_RS16785	0.21	-0.0
1,424,217	+		A4249_RS16785	0.21	+0.0
1,424,218	-		A4249_RS16785	0.21	-0.3
1,424,218	-		A4249_RS16785	0.21	+0.2
1,424,218	-		A4249_RS16785	0.21	-2.0
1,424,218	-		A4249_RS16785	0.21	-0.9
1,424,218	-		A4249_RS16785	0.21	-0.4
1,424,218	-		A4249_RS16785	0.21	-0.5
1,424,218	-		A4249_RS16785	0.21	-0.1
1,424,259	+		A4249_RS16785	0.24	-0.6
1,424,260	-		A4249_RS16785	0.24	-0.2
1,424,292	-		A4249_RS16785	0.27	+0.5
1,424,437	-		A4249_RS16785	0.37	+0.4
1,424,520	+		A4249_RS16785	0.43	-0.4
1,424,520	+		A4249_RS16785	0.43	+0.3
1,424,520	+		A4249_RS16785	0.43	+0.5
1,424,520	+		A4249_RS16785	0.43	-0.4
1,424,520	+		A4249_RS16785	0.43	-0.2
1,424,520	+		A4249_RS16785	0.43	+1.8
1,424,521	-		A4249_RS16785	0.44	-0.5
1,424,576	+		A4249_RS16785	0.48	-0.3
1,424,576	+		A4249_RS16785	0.48	-0.1
1,424,577	-		A4249_RS16785	0.48	-0.1
1,424,790	+		A4249_RS16785	0.63	+0.4
1,424,790	+		A4249_RS16785	0.63	-0.7
1,424,790	+		A4249_RS16785	0.63	-0.9
1,424,791	-		A4249_RS16785	0.63	-0.3
1,424,791	-		A4249_RS16785	0.63	-0.0
1,424,791	-		A4249_RS16785	0.63	-0.3
1,424,791	-		A4249_RS16785	0.63	-0.4