Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06090

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,236,689	+				+0.2
1,236,689	+				+0.6
1,236,689	+				-0.3
1,236,689	+				+0.1
1,236,689	+				+0.2
1,236,689	+				-0.4
1,236,689	+				-0.1
1,236,689	+				+0.9
1,236,690	-				-0.6
1,236,690	-				+0.5
1,236,690	-				-0.3
1,236,690	-				+0.8
1,236,690	-				-0.3
1,236,690	-				-0.3
1,236,690	-				-0.9
1,236,690	-				+0.0
1,236,690	-				-0.6
1,236,690	-				+0.5
1,236,690	-				+1.0
1,236,799	+				-0.7
1,236,799	+				+0.2
1,236,799	+				+0.8
1,236,799	+				+0.2
1,236,799	+				-0.2
1,236,799	+				-0.0
1,236,799	+				-0.3
1,236,799	+				-0.4
1,236,799	+				+0.9
1,236,799	+				-0.0
1,236,799	+				+1.1
1,236,799	+				+0.1
1,236,799	+				-0.3
1,236,799	+				+0.3
1,236,799	+				+0.5
1,236,799	+				-0.2
1,236,799	+				+1.5
1,236,799	+				-0.3
1,236,800	-				-0.7
1,236,800	-				+0.7
1,236,800	-				-0.3
1,236,800	-				+1.2
1,236,800	-				+0.3
1,236,800	-				-0.9
1,236,800	-				+0.4
1,236,800	-				+0.2
1,236,800	-				-0.5
1,236,800	-				-0.0
1,236,800	-				-1.0
1,236,800	-				-0.0
1,236,800	-				+0.4
1,236,800	-				-1.5
1,236,800	-				+0.7
1,236,800	-				+0.6
1,236,800	-				-0.0
1,236,886	+				+0.1
1,236,887	-				-0.4
1,236,887	-				-0.5
1,236,919	+		A4249_RS06085	0.12	+0.4
1,236,920	-		A4249_RS06085	0.12	+0.2
1,236,920	-		A4249_RS06085	0.12	-0.3
1,236,920	-		A4249_RS06085	0.12	-0.9
1,236,920	-		A4249_RS06085	0.12	-0.5
1,236,920	-		A4249_RS06085	0.12	+0.5
1,236,920	-		A4249_RS06085	0.12	+0.6
1,237,085	+		A4249_RS06085	0.33	-1.7
1,237,085	+		A4249_RS06085	0.33	-0.1
1,237,085	+		A4249_RS06085	0.33	-0.7
1,237,085	+		A4249_RS06085	0.33	-0.7
1,237,085	+		A4249_RS06085	0.33	-0.0
1,237,085	+		A4249_RS06085	0.33	+0.1
1,237,085	+		A4249_RS06085	0.33	-0.1
1,237,085	+		A4249_RS06085	0.33	+0.0
1,237,085	+		A4249_RS06085	0.33	+0.2
1,237,085	+		A4249_RS06085	0.33	-1.3
1,237,085	+		A4249_RS06085	0.33	-1.1
1,237,086	-		A4249_RS06085	0.33	-0.1
1,237,086	-		A4249_RS06085	0.33	+0.5
1,237,086	-		A4249_RS06085	0.33	-0.7
1,237,086	-		A4249_RS06085	0.33	-0.3
1,237,086	-		A4249_RS06085	0.33	+0.5
1,237,086	-		A4249_RS06085	0.33	-0.0
1,237,086	-		A4249_RS06085	0.33	-0.2
1,237,086	-		A4249_RS06085	0.33	+0.0
1,237,167	-		A4249_RS06085	0.44	+0.1
1,237,253	+		A4249_RS06085	0.55	-1.8
1,237,253	+		A4249_RS06085	0.55	-0.1
1,237,254	-		A4249_RS06085	0.55	-0.7
1,237,254	-		A4249_RS06085	0.55	-1.1
1,237,254	-		A4249_RS06085	0.55	+0.4
1,237,254	-		A4249_RS06085	0.55	-0.6
1,237,346	+		A4249_RS06085	0.67	-0.0
1,237,346	+		A4249_RS06085	0.67	-0.4
1,237,347	-		A4249_RS06085	0.67	-0.2
1,237,347	-		A4249_RS06085	0.67	+0.3
1,237,535	+				-0.1
1,237,575	+				+0.1
1,237,668	+				-0.7
1,237,668	+				-0.3
1,237,668	+				+0.3
1,237,669	-				+0.1
1,237,669	-				+1.0
1,237,888	+		A4249_RS06090	0.28	+0.3
1,237,888	+		A4249_RS06090	0.28	+0.7
1,237,888	+		A4249_RS06090	0.28	-1.1
1,237,888	+		A4249_RS06090	0.28	+0.6
1,237,889	-		A4249_RS06090	0.28	+0.2
1,237,889	-		A4249_RS06090	0.28	+0.1
1,237,889	-		A4249_RS06090	0.28	-0.8
1,237,889	-		A4249_RS06090	0.28	+0.5
1,237,973	+		A4249_RS06090	0.38	+0.3
1,237,973	+		A4249_RS06090	0.38	+0.6
1,237,973	+		A4249_RS06090	0.38	+0.7
1,237,973	+		A4249_RS06090	0.38	+0.6
1,237,973	+		A4249_RS06090	0.38	-0.2
1,237,973	+		A4249_RS06090	0.38	+0.4
1,237,973	+		A4249_RS06090	0.38	+0.0
1,237,974	-		A4249_RS06090	0.38	-0.0
1,237,974	-		A4249_RS06090	0.38	-0.4
1,237,974	-		A4249_RS06090	0.38	+0.1
1,237,974	-		A4249_RS06090	0.38	-0.5
1,237,974	-		A4249_RS06090	0.38	+0.2
1,237,974	-		A4249_RS06090	0.38	-0.2
1,237,974	-		A4249_RS06090	0.38	-0.3
1,237,974	-		A4249_RS06090	0.38	+0.8
1,237,974	-		A4249_RS06090	0.38	+0.1
1,238,071	+		A4249_RS06090	0.49	-0.4
1,238,071	+		A4249_RS06090	0.49	-0.4
1,238,072	-		A4249_RS06090	0.50	-0.1
1,238,072	-		A4249_RS06090	0.50	-0.7
1,238,072	-		A4249_RS06090	0.50	-0.1
1,238,176	+		A4249_RS06090	0.62	+0.7
1,238,176	+		A4249_RS06090	0.62	-0.0
1,238,177	-		A4249_RS06090	0.62	+0.1
1,238,177	-		A4249_RS06090	0.62	-0.2
1,238,177	-		A4249_RS06090	0.62	-0.5
1,238,422	+				-0.2
1,238,422	+				+0.4
1,238,423	-				+0.1
1,238,494	+				+0.6
1,238,494	+				+1.4
1,238,494	+				-0.3
1,238,495	-				+0.5
1,238,585	+				-0.1
1,238,585	+				-0.3
1,238,585	+				-0.0
1,238,585	+				+0.3
1,238,585	+				-0.7
1,238,585	+				+0.1
1,238,586	-				+0.2
1,238,586	-				-0.5
1,238,586	-				+0.9
1,238,670	+		A4249_RS06095	0.15	+0.5
1,238,671	-		A4249_RS06095	0.15	-0.9
1,238,671	-		A4249_RS06095	0.15	+0.5
1,238,671	-		A4249_RS06095	0.15	-1.2
1,238,908	+		A4249_RS06095	0.37	-0.2
1,238,908	+		A4249_RS06095	0.37	-0.2
1,238,909	-		A4249_RS06095	0.37	-0.9
1,238,931	+		A4249_RS06095	0.39	+0.6
1,238,931	+		A4249_RS06095	0.39	+0.4
1,238,932	-		A4249_RS06095	0.39	+0.3
1,239,148	+		A4249_RS06095	0.59	-0.1
1,239,148	+		A4249_RS06095	0.59	+0.3
1,239,148	+		A4249_RS06095	0.59	+0.5
1,239,148	+		A4249_RS06095	0.59	-0.4
1,239,148	+		A4249_RS06095	0.59	-0.0
1,239,441	-		A4249_RS06095	0.87	-2.4