Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05465

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,116,317	+		A4249_RS05460	0.10	-0.1
1,116,317	+		A4249_RS05460	0.10	-0.2
1,116,318	-		A4249_RS05460	0.10	-0.0
1,116,318	-		A4249_RS05460	0.10	-0.3
1,116,318	-		A4249_RS05460	0.10	-0.1
1,116,454	+		A4249_RS05460	0.24	+0.1
1,116,843	+		A4249_RS05460	0.63	-0.2
1,116,843	+		A4249_RS05460	0.63	-0.0
1,116,843	+		A4249_RS05460	0.63	+0.6
1,116,892	+		A4249_RS05460	0.68	+0.0
1,116,892	+		A4249_RS05460	0.68	-0.2
1,116,892	+		A4249_RS05460	0.68	+0.5
1,116,893	-		A4249_RS05460	0.68	+0.5
1,117,441	+		A4249_RS05465	0.32	+0.6
1,117,441	+		A4249_RS05465	0.32	+2.3
1,117,441	+		A4249_RS05465	0.32	+0.6
1,117,441	+		A4249_RS05465	0.32	+0.2
1,117,628	+		A4249_RS05465	0.56	+0.9
1,117,628	+		A4249_RS05465	0.56	-0.8
1,117,628	+		A4249_RS05465	0.56	+0.2
1,117,629	-		A4249_RS05465	0.57	+0.5
1,117,629	-		A4249_RS05465	0.57	-0.7
1,117,862	+		A4249_RS05465	0.87	+0.3
1,117,862	+		A4249_RS05465	0.87	+1.4
1,117,862	+		A4249_RS05465	0.87	+0.2
1,117,862	+		A4249_RS05465	0.87	+0.1
1,117,862	+		A4249_RS05465	0.87	+0.2
1,117,863	-		A4249_RS05465	0.88	-0.4
1,117,863	-		A4249_RS05465	0.88	+0.6
1,117,863	-		A4249_RS05465	0.88	-1.4
1,117,954	+				-0.2
1,117,954	+				+0.0
1,117,955	-				+0.1
1,117,955	-				+0.9
1,117,961	+				+0.0
1,117,961	+				+0.6
1,117,963	+				-0.3
1,117,963	+				+0.2
1,117,963	+				+0.5
1,117,963	+				+0.1
1,117,963	+				-0.0
1,117,963	+				-0.6
1,117,963	+				+0.2
1,117,963	+				-0.0
1,117,964	-				-0.6
1,117,964	-				-0.4
1,117,964	-				+0.0
1,117,964	-				+0.4
1,117,964	-				-0.1
1,117,964	-				-0.2
1,117,964	-				+0.5
1,117,964	-				+0.2
1,117,964	-				+0.5
1,118,047	+				+0.1
1,118,047	+				-0.5
1,118,047	+				-0.2
1,118,048	-				-0.2
1,118,078	+				-0.5
1,118,078	+				-0.4
1,118,078	+				+0.1
1,118,078	+				+0.0
1,118,078	+				-0.6
1,118,078	+				+0.0
1,118,078	+				+0.4
1,118,078	+				-0.1
1,118,078	+				-0.3
1,118,079	-				-0.4
1,118,079	-				+0.3
1,118,079	-				-0.1
1,118,079	-				-0.0
1,118,080	+				-0.4
1,118,080	+				-0.1
1,118,080	+				-0.1
1,118,080	+				-0.1
1,118,080	+				+0.0
1,118,080	+				-0.2
1,118,080	+				+0.1
1,118,080	+				-0.3
1,118,081	-				-0.6
1,118,081	-				+0.3
1,118,081	-				-0.3
1,118,081	-				-0.3
1,118,081	-				-0.3
1,118,081	-				+0.1
1,118,081	-				-0.1
1,118,197	+		A4249_RS05470	0.12	-0.5
1,118,197	+		A4249_RS05470	0.12	-0.0
1,118,197	+		A4249_RS05470	0.12	+0.1
1,118,197	+		A4249_RS05470	0.12	-0.1
1,118,197	+		A4249_RS05470	0.12	+0.1
1,118,197	+		A4249_RS05470	0.12	+0.2
1,118,197	+		A4249_RS05470	0.12	+0.1
1,118,198	-		A4249_RS05470	0.12	-0.0
1,118,198	-		A4249_RS05470	0.12	+0.0
1,118,198	-		A4249_RS05470	0.12	+0.4
1,118,198	-		A4249_RS05470	0.12	+0.1
1,118,198	-		A4249_RS05470	0.12	-0.2
1,118,198	-		A4249_RS05470	0.12	-0.4
1,118,229	-		A4249_RS05470	0.14	-0.2
1,118,257	+		A4249_RS05470	0.15	+0.2
1,118,257	+		A4249_RS05470	0.15	-0.9
1,118,258	-		A4249_RS05470	0.15	-0.5
1,118,258	-		A4249_RS05470	0.15	+0.2
1,118,258	-		A4249_RS05470	0.15	-0.0
1,118,258	-		A4249_RS05470	0.15	-0.2
1,118,278	+		A4249_RS05470	0.16	-0.3
1,118,278	+		A4249_RS05470	0.16	-0.0
1,118,279	-		A4249_RS05470	0.16	-0.7
1,118,279	-		A4249_RS05470	0.16	-0.4
1,118,279	-		A4249_RS05470	0.16	-0.4
1,118,308	+		A4249_RS05470	0.17	+0.1
1,118,308	+		A4249_RS05470	0.17	-0.9
1,118,308	+		A4249_RS05470	0.17	+0.0
1,118,309	-		A4249_RS05470	0.17	+0.1
1,118,309	-		A4249_RS05470	0.17	-0.7
1,118,309	-		A4249_RS05470	0.17	+0.0
1,118,486	-		A4249_RS05470	0.26	-0.0
1,118,486	-		A4249_RS05470	0.26	+0.4
1,118,486	-		A4249_RS05470	0.26	+0.0
1,118,486	-		A4249_RS05470	0.26	-0.2
1,118,486	-		A4249_RS05470	0.26	+0.0
1,118,486	-		A4249_RS05470	0.26	-0.1
1,118,561	-		A4249_RS05470	0.30	-0.2
1,118,626	+		A4249_RS05470	0.33	-0.3
1,118,627	-		A4249_RS05470	0.33	-0.3
1,118,627	-		A4249_RS05470	0.33	-0.1
1,118,791	+		A4249_RS05470	0.41	+1.3
1,118,791	+		A4249_RS05470	0.41	-0.4
1,118,791	+		A4249_RS05470	0.41	-0.0
1,118,792	-		A4249_RS05470	0.41	-0.0
1,118,824	+		A4249_RS05470	0.42	-0.0
1,118,824	+		A4249_RS05470	0.42	-0.2
1,118,824	+		A4249_RS05470	0.42	-0.3
1,118,825	-		A4249_RS05470	0.42	-0.1
1,118,825	-		A4249_RS05470	0.42	-0.2
1,118,825	-		A4249_RS05470	0.42	-0.2
1,118,827	+		A4249_RS05470	0.43	-0.1
1,118,827	+		A4249_RS05470	0.43	+0.1
1,118,827	+		A4249_RS05470	0.43	-0.0
1,118,827	+		A4249_RS05470	0.43	-0.3
1,118,827	+		A4249_RS05470	0.43	-1.7
1,118,827	+		A4249_RS05470	0.43	-0.1
1,118,828	-		A4249_RS05470	0.43	+0.2
1,118,828	-		A4249_RS05470	0.43	-0.6
1,118,828	-		A4249_RS05470	0.43	+0.2
1,118,828	-		A4249_RS05470	0.43	-0.2
1,118,828	-		A4249_RS05470	0.43	-0.2
1,118,828	-		A4249_RS05470	0.43	+0.1
1,118,828	-		A4249_RS05470	0.43	+0.1
1,118,881	+		A4249_RS05470	0.45	-0.7
1,118,881	+		A4249_RS05470	0.45	+0.1
1,118,881	+		A4249_RS05470	0.45	-0.0
1,118,881	+		A4249_RS05470	0.45	-0.1
1,118,881	+		A4249_RS05470	0.45	+0.1
1,118,881	+		A4249_RS05470	0.45	-0.1
1,118,881	+		A4249_RS05470	0.45	-0.1
1,118,881	+		A4249_RS05470	0.45	-0.2
1,118,881	+		A4249_RS05470	0.45	-0.6
1,118,882	-		A4249_RS05470	0.45	-0.1
1,118,882	-		A4249_RS05470	0.45	-0.2
1,118,882	-		A4249_RS05470	0.45	-0.5
1,118,882	-		A4249_RS05470	0.45	+0.3
1,118,882	-		A4249_RS05470	0.45	-0.4
1,118,882	-		A4249_RS05470	0.45	+0.1
1,118,882	-		A4249_RS05470	0.45	+0.1
1,118,882	-		A4249_RS05470	0.45	-0.2
1,118,882	-		A4249_RS05470	0.45	-0.2