Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05055

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,043,880	-				+1.0
1,043,910	-		A4249_RS05045	0.10	-0.4
1,043,954	+		A4249_RS05045	0.24	+0.6
1,043,955	-		A4249_RS05045	0.24	+0.1
1,044,014	+		A4249_RS05045	0.42	+0.1
1,044,014	+		A4249_RS05045	0.42	-1.2
1,044,014	+		A4249_RS05045	0.42	+0.5
1,044,015	-		A4249_RS05045	0.43	+0.2
1,044,015	-		A4249_RS05045	0.43	-0.2
1,044,015	-		A4249_RS05045	0.43	-0.2
1,044,015	-		A4249_RS05045	0.43	-0.2
1,044,050	+		A4249_RS05045	0.54	+0.6
1,044,051	-		A4249_RS05045	0.54	-0.4
1,044,051	-		A4249_RS05045	0.54	+0.3
1,044,051	-		A4249_RS05045	0.54	-0.2
1,044,194	+				+1.0
1,044,194	+				-0.7
1,044,194	+				-0.1
1,044,194	+				-1.6
1,044,194	+				+0.4
1,044,194	+				+0.5
1,044,194	+				-0.1
1,044,194	+				-0.6
1,044,194	+				-0.4
1,044,194	+				-0.9
1,044,194	+				+0.4
1,044,194	+				+0.3
1,044,195	-				+2.1
1,044,195	-				-0.5
1,044,195	-				+0.1
1,044,195	-				-0.6
1,044,195	-				+0.1
1,044,195	-				+0.7
1,044,195	-				-0.5
1,044,195	-				-0.6
1,044,195	-				+0.6
1,044,195	-				-0.9
1,044,195	-				-0.7
1,044,195	-				+0.1
1,044,209	+				+0.1
1,044,749	-				-0.6
1,044,802	+				+0.1
1,044,802	+				-1.0
1,044,802	+				+0.0
1,044,802	+				-0.1
1,044,802	+				-0.4
1,044,803	-				-0.2
1,044,803	-				-0.1
1,044,803	-				+0.3
1,044,803	-				-0.0
1,044,803	-				-0.2
1,044,803	-				-0.1
1,044,803	-				-0.1
1,044,896	-		A4249_RS05055	0.18	-1.9
1,044,896	-		A4249_RS05055	0.18	-0.2
1,044,896	-		A4249_RS05055	0.18	-0.4
1,044,940	+		A4249_RS05055	0.25	-0.3
1,044,940	+		A4249_RS05055	0.25	+1.0
1,044,940	+		A4249_RS05055	0.25	+0.1
1,044,940	+		A4249_RS05055	0.25	-0.0
1,044,940	+		A4249_RS05055	0.25	-0.7
1,044,941	-		A4249_RS05055	0.25	+0.1
1,044,941	-		A4249_RS05055	0.25	-0.4
1,044,941	-		A4249_RS05055	0.25	-0.9
1,044,941	-		A4249_RS05055	0.25	-2.1
1,044,956	+		A4249_RS05055	0.28	-0.1
1,044,957	-		A4249_RS05055	0.28	-0.8
1,044,957	-		A4249_RS05055	0.28	-0.2
1,045,054	+		A4249_RS05055	0.44	+0.0
1,045,378	+				-0.3
1,045,378	+				-0.4
1,045,378	+				-0.7
1,045,378	+				-0.3
1,045,379	-				-1.1
1,045,379	-				+0.9
1,045,379	-				+0.3
1,045,440	+		A4249_RS05060	0.21	-0.8
1,045,440	+		A4249_RS05060	0.21	+0.2
1,045,440	+		A4249_RS05060	0.21	+0.5
1,045,440	+		A4249_RS05060	0.21	+0.2
1,045,440	+		A4249_RS05060	0.21	+0.5
1,045,441	-		A4249_RS05060	0.21	+0.4
1,045,441	-		A4249_RS05060	0.21	-0.6
1,045,459	+		A4249_RS05060	0.27	+0.6
1,045,459	+		A4249_RS05060	0.27	-0.0
1,045,459	+		A4249_RS05060	0.27	-0.1
1,045,459	+		A4249_RS05060	0.27	+0.2
1,045,460	-		A4249_RS05060	0.27	+0.4
1,045,460	-		A4249_RS05060	0.27	-0.8
1,045,460	-		A4249_RS05060	0.27	+0.2
1,045,633	+		A4249_RS05060	0.84	-0.2
1,045,633	+		A4249_RS05060	0.84	-1.0
1,045,633	+		A4249_RS05060	0.84	-0.2
1,045,633	+		A4249_RS05060	0.84	+0.1
1,045,633	+		A4249_RS05060	0.84	+0.7
1,045,633	+		A4249_RS05060	0.84	-0.0
1,045,634	-		A4249_RS05060	0.84	-0.3
1,045,634	-		A4249_RS05060	0.84	-0.2
1,045,634	-		A4249_RS05060	0.84	+0.1
1,045,634	-		A4249_RS05060	0.84	+1.1
1,045,634	-		A4249_RS05060	0.84	-0.3
1,045,763	+				+0.1
1,045,763	+				+0.5
1,045,763	+				-0.0
1,045,763	+				+0.3
1,045,764	-				-0.0
1,045,764	-				+0.2
1,045,764	-				+0.4
1,045,764	-				+0.0
1,045,980	+		A4249_RS05065	0.34	-0.3
1,045,980	+		A4249_RS05065	0.34	+0.8
1,045,980	+		A4249_RS05065	0.34	+0.1
1,045,980	+		A4249_RS05065	0.34	+0.1
1,045,980	+		A4249_RS05065	0.34	-1.0
1,045,980	+		A4249_RS05065	0.34	-0.2
1,045,980	+		A4249_RS05065	0.34	+1.2
1,045,980	+		A4249_RS05065	0.34	+0.2
1,045,981	-		A4249_RS05065	0.34	-0.3
1,045,981	-		A4249_RS05065	0.34	+0.3
1,045,981	-		A4249_RS05065	0.34	-0.2
1,045,981	-		A4249_RS05065	0.34	-1.2
1,045,985	+		A4249_RS05065	0.35	+0.3
1,045,985	+		A4249_RS05065	0.35	+0.2
1,045,985	+		A4249_RS05065	0.35	-1.2
1,045,986	-		A4249_RS05065	0.35	-0.4
1,045,986	-		A4249_RS05065	0.35	-0.8
1,045,986	-		A4249_RS05065	0.35	+0.5
1,045,986	-		A4249_RS05065	0.35	+0.2
1,046,014	-		A4249_RS05065	0.38	-0.1
1,046,014	-		A4249_RS05065	0.38	-0.2
1,046,047	+		A4249_RS05065	0.42	+0.7
1,046,048	-		A4249_RS05065	0.42	+0.1
1,046,225	+		A4249_RS05065	0.63	-0.1
1,046,225	+		A4249_RS05065	0.63	+0.8
1,046,225	+		A4249_RS05065	0.63	+0.9
1,046,226	-		A4249_RS05065	0.63	-1.2
1,046,226	-		A4249_RS05065	0.63	+0.0
1,046,226	-		A4249_RS05065	0.63	+0.2
1,046,318	+		A4249_RS05065	0.74	+0.1
1,046,318	+		A4249_RS05065	0.74	-0.3
1,046,318	+		A4249_RS05065	0.74	-0.3
1,046,318	+		A4249_RS05065	0.74	-2.0
1,046,318	+		A4249_RS05065	0.74	+0.8
1,046,318	+		A4249_RS05065	0.74	+0.1
1,046,318	+		A4249_RS05065	0.74	+0.2
1,046,318	+		A4249_RS05065	0.74	-0.5
1,046,318	+		A4249_RS05065	0.74	+0.2
1,046,319	-		A4249_RS05065	0.74	-0.6
1,046,319	-		A4249_RS05065	0.74	+0.1
1,046,319	-		A4249_RS05065	0.74	-0.4
1,046,319	-		A4249_RS05065	0.74	-0.6
1,046,337	+		A4249_RS05065	0.76	-0.0
1,046,338	-		A4249_RS05065	0.76	-0.0
1,046,338	-		A4249_RS05065	0.76	+0.5
1,046,339	+		A4249_RS05065	0.76	+0.2
1,046,339	+		A4249_RS05065	0.76	+0.4
1,046,340	-		A4249_RS05065	0.76	+1.3
1,046,340	-		A4249_RS05065	0.76	-0.6