Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03735 and A4249_RS03740 are separated by 26 nucleotides A4249_RS03740 and A4249_RS03745 are separated by 31 nucleotides A4249_RS03745 and A4249_RS03750 are separated by 172 nucleotides A4249_RS03750 and A4249_RS03755 overlap by 7 nucleotides
A4249_RS03735: A4249_RS03735 - amidophosphoribosyltransferase, at 786,420 to 787,925
_RS03735
A4249_RS03740: A4249_RS03740 - CvpA family protein, at 787,952 to 788,548
_RS03740
A4249_RS03745: A4249_RS03745 - DNA repair protein RadA, at 788,580 to 789,950
_RS03745
A4249_RS03750: A4249_RS03750 - Yip1 family protein, at 790,123 to 790,770
_RS03750
A4249_RS03755: A4249_RS03755 - alanine racemase, at 790,764 to 791,804
_RS03755
Position (kb) 788
789
790 Strain fitness (log2 ratio) -1
0
1
2 at 787.953 kb on + strand at 787.953 kb on + strand at 787.953 kb on + strand at 787.953 kb on + strand at 787.953 kb on + strand at 787.953 kb on + strand at 787.953 kb on + strand at 787.954 kb on - strand at 787.954 kb on - strand at 787.979 kb on - strand at 787.979 kb on - strand at 787.979 kb on - strand at 788.030 kb on + strand, within A4249_RS03740 at 788.030 kb on + strand, within A4249_RS03740 at 788.031 kb on - strand, within A4249_RS03740 at 788.031 kb on - strand, within A4249_RS03740 at 788.325 kb on + strand, within A4249_RS03740 at 788.325 kb on + strand, within A4249_RS03740 at 788.326 kb on - strand, within A4249_RS03740 at 788.326 kb on - strand, within A4249_RS03740 at 788.461 kb on + strand, within A4249_RS03740 at 788.461 kb on + strand, within A4249_RS03740 at 788.461 kb on + strand, within A4249_RS03740 at 788.461 kb on + strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.462 kb on - strand, within A4249_RS03740 at 788.571 kb on + strand at 788.571 kb on + strand at 788.571 kb on + strand at 788.571 kb on + strand at 788.572 kb on - strand at 788.572 kb on - strand at 788.572 kb on - strand at 788.581 kb on + strand at 788.581 kb on + strand at 788.581 kb on + strand at 788.581 kb on + strand at 788.581 kb on + strand at 788.581 kb on + strand at 788.581 kb on + strand at 788.582 kb on - strand at 788.582 kb on - strand at 788.582 kb on - strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.862 kb on + strand, within A4249_RS03745 at 788.862 kb on + strand, within A4249_RS03745 at 788.862 kb on + strand, within A4249_RS03745 at 788.863 kb on - strand, within A4249_RS03745 at 788.863 kb on - strand, within A4249_RS03745 at 788.863 kb on - strand, within A4249_RS03745 at 788.884 kb on + strand, within A4249_RS03745 at 788.884 kb on + strand, within A4249_RS03745 at 788.884 kb on + strand, within A4249_RS03745 at 788.884 kb on + strand, within A4249_RS03745 at 788.885 kb on - strand, within A4249_RS03745 at 788.885 kb on - strand, within A4249_RS03745 at 788.993 kb on - strand, within A4249_RS03745 at 788.993 kb on - strand, within A4249_RS03745 at 788.993 kb on - strand, within A4249_RS03745 at 789.096 kb on + strand, within A4249_RS03745 at 789.097 kb on - strand, within A4249_RS03745 at 789.154 kb on - strand, within A4249_RS03745 at 789.154 kb on - strand, within A4249_RS03745 at 789.294 kb on - strand, within A4249_RS03745 at 789.578 kb on + strand, within A4249_RS03745 at 789.578 kb on + strand, within A4249_RS03745 at 789.578 kb on + strand, within A4249_RS03745 at 789.578 kb on + strand, within A4249_RS03745 at 789.578 kb on + strand, within A4249_RS03745 at 789.578 kb on + strand, within A4249_RS03745 at 789.578 kb on + strand, within A4249_RS03745 at 789.579 kb on - strand, within A4249_RS03745 at 789.579 kb on - strand, within A4249_RS03745 at 789.579 kb on - strand, within A4249_RS03745 at 789.579 kb on - strand, within A4249_RS03745 at 789.579 kb on - strand, within A4249_RS03745 at 789.579 kb on - strand, within A4249_RS03745 at 789.579 kb on - strand, within A4249_RS03745 at 789.580 kb on + strand, within A4249_RS03745 at 789.580 kb on + strand, within A4249_RS03745 at 789.580 kb on + strand, within A4249_RS03745 at 789.580 kb on + strand, within A4249_RS03745 at 789.580 kb on + strand, within A4249_RS03745 at 789.580 kb on + strand, within A4249_RS03745 at 789.580 kb on + strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.581 kb on - strand, within A4249_RS03745 at 789.928 kb on + strand at 789.928 kb on + strand at 789.928 kb on + strand at 789.928 kb on + strand at 789.928 kb on + strand at 789.928 kb on + strand at 789.928 kb on + strand at 789.928 kb on + strand at 789.929 kb on - strand at 789.929 kb on - strand at 789.929 kb on - strand at 789.929 kb on - strand at 789.929 kb on - strand at 789.929 kb on - strand at 789.960 kb on + strand at 790.034 kb on - strand at 790.034 kb on - strand at 790.190 kb on + strand, within A4249_RS03750 at 790.190 kb on + strand, within A4249_RS03750 at 790.190 kb on + strand, within A4249_RS03750 at 790.190 kb on + strand, within A4249_RS03750 at 790.190 kb on + strand, within A4249_RS03750 at 790.191 kb on - strand, within A4249_RS03750 at 790.191 kb on - strand, within A4249_RS03750 at 790.191 kb on - strand, within A4249_RS03750 at 790.191 kb on - strand, within A4249_RS03750 at 790.191 kb on - strand, within A4249_RS03750 at 790.191 kb on - strand, within A4249_RS03750 at 790.264 kb on + strand, within A4249_RS03750 at 790.264 kb on + strand, within A4249_RS03750 at 790.352 kb on + strand, within A4249_RS03750 at 790.352 kb on + strand, within A4249_RS03750 at 790.382 kb on - strand, within A4249_RS03750 at 790.382 kb on - strand, within A4249_RS03750 at 790.489 kb on + strand, within A4249_RS03750 at 790.489 kb on + strand, within A4249_RS03750 at 790.489 kb on + strand, within A4249_RS03750 at 790.489 kb on + strand, within A4249_RS03750 at 790.489 kb on + strand, within A4249_RS03750 at 790.490 kb on - strand, within A4249_RS03750 at 790.567 kb on + strand, within A4249_RS03750 at 790.568 kb on - strand, within A4249_RS03750 at 790.568 kb on - strand, within A4249_RS03750 at 790.568 kb on - strand, within A4249_RS03750 at 790.568 kb on - strand, within A4249_RS03750 at 790.568 kb on - strand, within A4249_RS03750 at 790.568 kb on - strand, within A4249_RS03750 at 790.576 kb on + strand, within A4249_RS03750 at 790.576 kb on + strand, within A4249_RS03750 at 790.576 kb on + strand, within A4249_RS03750 at 790.576 kb on + strand, within A4249_RS03750 at 790.576 kb on + strand, within A4249_RS03750 at 790.576 kb on + strand, within A4249_RS03750 at 790.577 kb on - strand, within A4249_RS03750 at 790.636 kb on + strand, within A4249_RS03750 at 790.636 kb on + strand, within A4249_RS03750 at 790.637 kb on - strand, within A4249_RS03750 at 790.672 kb on + strand, within A4249_RS03750 at 790.672 kb on + strand, within A4249_RS03750 at 790.672 kb on + strand, within A4249_RS03750 at 790.672 kb on + strand, within A4249_RS03750 at 790.672 kb on + strand, within A4249_RS03750 at 790.672 kb on + strand, within A4249_RS03750 at 790.672 kb on + strand, within A4249_RS03750 at 790.673 kb on - strand, within A4249_RS03750 at 790.673 kb on - strand, within A4249_RS03750 at 790.673 kb on - strand, within A4249_RS03750 at 790.673 kb on - strand, within A4249_RS03750 at 790.673 kb on - strand, within A4249_RS03750
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 787,953 + -0.4 787,953 + -0.4 787,953 + +0.7 787,953 + -0.5 787,953 + +1.5 787,953 + +0.4 787,953 + +0.0 787,954 - +0.0 787,954 - -0.2 787,979 - -1.5 787,979 - +0.3 787,979 - -1.0 788,030 + A4249_RS03740 0.13 +0.7 788,030 + A4249_RS03740 0.13 -0.5 788,031 - A4249_RS03740 0.13 -0.7 788,031 - A4249_RS03740 0.13 -0.9 788,325 + A4249_RS03740 0.62 -0.7 788,325 + A4249_RS03740 0.62 -0.3 788,326 - A4249_RS03740 0.63 -1.1 788,326 - A4249_RS03740 0.63 +0.4 788,461 + A4249_RS03740 0.85 -0.0 788,461 + A4249_RS03740 0.85 +0.1 788,461 + A4249_RS03740 0.85 -0.7 788,461 + A4249_RS03740 0.85 +0.1 788,462 - A4249_RS03740 0.85 -0.1 788,462 - A4249_RS03740 0.85 +0.6 788,462 - A4249_RS03740 0.85 -0.4 788,462 - A4249_RS03740 0.85 +0.3 788,462 - A4249_RS03740 0.85 -0.8 788,462 - A4249_RS03740 0.85 +0.7 788,462 - A4249_RS03740 0.85 -0.4 788,462 - A4249_RS03740 0.85 +0.3 788,571 + -0.1 788,571 + +0.7 788,571 + +0.6 788,571 + -0.7 788,572 - -0.5 788,572 - +0.3 788,572 - -0.1 788,581 + -0.3 788,581 + +0.1 788,581 + +0.1 788,581 + +0.4 788,581 + +0.3 788,581 + +0.5 788,581 + -0.6 788,582 - -0.4 788,582 - +0.0 788,582 - -0.7 788,584 + -0.6 788,584 + -0.1 788,584 + -0.1 788,584 + -0.3 788,585 - +0.7 788,585 - +0.1 788,862 + A4249_RS03745 0.21 +0.4 788,862 + A4249_RS03745 0.21 -1.4 788,862 + A4249_RS03745 0.21 -1.2 788,863 - A4249_RS03745 0.21 -0.1 788,863 - A4249_RS03745 0.21 -0.0 788,863 - A4249_RS03745 0.21 +1.5 788,884 + A4249_RS03745 0.22 -0.2 788,884 + A4249_RS03745 0.22 +0.2 788,884 + A4249_RS03745 0.22 +0.5 788,884 + A4249_RS03745 0.22 -0.1 788,885 - A4249_RS03745 0.22 +0.2 788,885 - A4249_RS03745 0.22 +0.5 788,993 - A4249_RS03745 0.30 -0.5 788,993 - A4249_RS03745 0.30 -0.6 788,993 - A4249_RS03745 0.30 -0.4 789,096 + A4249_RS03745 0.38 -0.8 789,097 - A4249_RS03745 0.38 -0.7 789,154 - A4249_RS03745 0.42 -1.0 789,154 - A4249_RS03745 0.42 +0.7 789,294 - A4249_RS03745 0.52 +0.1 789,578 + A4249_RS03745 0.73 -0.0 789,578 + A4249_RS03745 0.73 -1.1 789,578 + A4249_RS03745 0.73 +0.1 789,578 + A4249_RS03745 0.73 -1.4 789,578 + A4249_RS03745 0.73 -0.3 789,578 + A4249_RS03745 0.73 -1.7 789,578 + A4249_RS03745 0.73 +1.7 789,579 - A4249_RS03745 0.73 -0.6 789,579 - A4249_RS03745 0.73 +0.3 789,579 - A4249_RS03745 0.73 -0.2 789,579 - A4249_RS03745 0.73 -1.4 789,579 - A4249_RS03745 0.73 -0.4 789,579 - A4249_RS03745 0.73 -0.0 789,579 - A4249_RS03745 0.73 -0.8 789,580 + A4249_RS03745 0.73 +1.7 789,580 + A4249_RS03745 0.73 +0.0 789,580 + A4249_RS03745 0.73 -0.5 789,580 + A4249_RS03745 0.73 -1.1 789,580 + A4249_RS03745 0.73 +0.7 789,580 + A4249_RS03745 0.73 -0.0 789,580 + A4249_RS03745 0.73 -0.6 789,581 - A4249_RS03745 0.73 -0.1 789,581 - A4249_RS03745 0.73 +1.2 789,581 - A4249_RS03745 0.73 -0.1 789,581 - A4249_RS03745 0.73 +0.3 789,581 - A4249_RS03745 0.73 -0.1 789,581 - A4249_RS03745 0.73 +0.7 789,581 - A4249_RS03745 0.73 +0.2 789,581 - A4249_RS03745 0.73 +0.7 789,581 - A4249_RS03745 0.73 -0.6 789,581 - A4249_RS03745 0.73 +1.7 789,581 - A4249_RS03745 0.73 +1.1 789,581 - A4249_RS03745 0.73 -0.1 789,928 + +0.4 789,928 + -0.2 789,928 + +0.7 789,928 + +0.2 789,928 + -0.6 789,928 + -0.5 789,928 + -0.1 789,928 + -1.4 789,929 - +0.3 789,929 - +0.4 789,929 - -0.1 789,929 - +0.1 789,929 - +0.2 789,929 - -0.2 789,960 + +0.5 790,034 - +0.2 790,034 - +0.6 790,190 + A4249_RS03750 0.10 -0.3 790,190 + A4249_RS03750 0.10 -0.7 790,190 + A4249_RS03750 0.10 +1.4 790,190 + A4249_RS03750 0.10 -0.0 790,190 + A4249_RS03750 0.10 +0.6 790,191 - A4249_RS03750 0.10 +0.2 790,191 - A4249_RS03750 0.10 -1.1 790,191 - A4249_RS03750 0.10 +0.3 790,191 - A4249_RS03750 0.10 +0.0 790,191 - A4249_RS03750 0.10 +1.9 790,191 - A4249_RS03750 0.10 -1.6 790,264 + A4249_RS03750 0.22 -0.0 790,264 + A4249_RS03750 0.22 +0.1 790,352 + A4249_RS03750 0.35 +0.7 790,352 + A4249_RS03750 0.35 -1.4 790,382 - A4249_RS03750 0.40 -0.7 790,382 - A4249_RS03750 0.40 -0.1 790,489 + A4249_RS03750 0.56 -0.8 790,489 + A4249_RS03750 0.56 -0.1 790,489 + A4249_RS03750 0.56 +0.3 790,489 + A4249_RS03750 0.56 +0.5 790,489 + A4249_RS03750 0.56 +0.2 790,490 - A4249_RS03750 0.57 -0.0 790,567 + A4249_RS03750 0.69 -0.7 790,568 - A4249_RS03750 0.69 +1.0 790,568 - A4249_RS03750 0.69 +0.1 790,568 - A4249_RS03750 0.69 +0.0 790,568 - A4249_RS03750 0.69 +0.4 790,568 - A4249_RS03750 0.69 +0.3 790,568 - A4249_RS03750 0.69 -1.3 790,576 + A4249_RS03750 0.70 -0.1 790,576 + A4249_RS03750 0.70 -0.0 790,576 + A4249_RS03750 0.70 +0.5 790,576 + A4249_RS03750 0.70 +0.3 790,576 + A4249_RS03750 0.70 +0.7 790,576 + A4249_RS03750 0.70 +0.4 790,577 - A4249_RS03750 0.70 +1.5 790,636 + A4249_RS03750 0.79 +0.4 790,636 + A4249_RS03750 0.79 +0.3 790,637 - A4249_RS03750 0.79 -0.3 790,672 + A4249_RS03750 0.85 +0.7 790,672 + A4249_RS03750 0.85 -0.1 790,672 + A4249_RS03750 0.85 +0.6 790,672 + A4249_RS03750 0.85 +0.0 790,672 + A4249_RS03750 0.85 -0.6 790,672 + A4249_RS03750 0.85 +0.7 790,672 + A4249_RS03750 0.85 -0.8 790,673 - A4249_RS03750 0.85 -1.3 790,673 - A4249_RS03750 0.85 -0.4 790,673 - A4249_RS03750 0.85 +1.4 790,673 - A4249_RS03750 0.85 +0.8 790,673 - A4249_RS03750 0.85 -0.8
Or see this region's nucleotide sequence