Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02795 and A4249_RS02800 are separated by 34 nucleotides A4249_RS02800 and A4249_RS02805 are separated by 53 nucleotides A4249_RS02805 and A4249_RS02810 are separated by 13 nucleotides
A4249_RS02795: A4249_RS02795 - DNA gyrase subunit A, at 591,348 to 594,125
_RS02795
A4249_RS02800: A4249_RS02800 - aminotransferase class IV, at 594,160 to 594,999
_RS02800
A4249_RS02805: A4249_RS02805 - pantetheine-phosphate adenylyltransferase, at 595,053 to 595,538
_RS02805
A4249_RS02810: A4249_RS02810 - peptidylprolyl isomerase, at 595,552 to 596,415
_RS02810
Position (kb) 594
595 Strain fitness (log2 ratio) -1
0
1 at 594.233 kb on - strand at 594.233 kb on - strand at 594.241 kb on + strand at 594.241 kb on + strand at 594.241 kb on + strand at 594.242 kb on - strand at 594.242 kb on - strand at 594.242 kb on - strand at 594.242 kb on - strand at 594.242 kb on - strand at 594.448 kb on + strand, within A4249_RS02800 at 594.448 kb on + strand, within A4249_RS02800 at 594.448 kb on + strand, within A4249_RS02800 at 594.448 kb on + strand, within A4249_RS02800 at 594.448 kb on + strand, within A4249_RS02800 at 594.449 kb on - strand, within A4249_RS02800 at 594.449 kb on - strand, within A4249_RS02800 at 594.509 kb on + strand, within A4249_RS02800 at 594.509 kb on + strand, within A4249_RS02800 at 594.510 kb on - strand, within A4249_RS02800 at 594.532 kb on + strand, within A4249_RS02800 at 594.532 kb on + strand, within A4249_RS02800 at 594.532 kb on + strand, within A4249_RS02800 at 594.533 kb on - strand, within A4249_RS02800 at 594.533 kb on - strand, within A4249_RS02800 at 594.533 kb on - strand, within A4249_RS02800 at 594.533 kb on - strand, within A4249_RS02800 at 595.013 kb on - strand at 595.537 kb on - strand at 595.541 kb on + strand at 595.541 kb on + strand at 595.542 kb on - strand at 595.557 kb on + strand at 595.557 kb on + strand at 595.557 kb on + strand at 595.557 kb on + strand at 595.557 kb on + strand at 595.690 kb on - strand, within A4249_RS02810 at 595.780 kb on + strand, within A4249_RS02810 at 595.780 kb on + strand, within A4249_RS02810 at 595.780 kb on + strand, within A4249_RS02810 at 595.781 kb on - strand, within A4249_RS02810 at 595.781 kb on - strand, within A4249_RS02810 at 595.781 kb on - strand, within A4249_RS02810 at 595.781 kb on - strand, within A4249_RS02810
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 594,233 - +0.8 594,233 - -0.4 594,241 + +0.4 594,241 + +0.2 594,241 + -0.0 594,242 - -0.8 594,242 - +0.6 594,242 - +0.4 594,242 - -0.4 594,242 - -0.4 594,448 + A4249_RS02800 0.34 +0.6 594,448 + A4249_RS02800 0.34 +0.6 594,448 + A4249_RS02800 0.34 +0.6 594,448 + A4249_RS02800 0.34 -1.1 594,448 + A4249_RS02800 0.34 +0.1 594,449 - A4249_RS02800 0.34 +0.6 594,449 - A4249_RS02800 0.34 -1.3 594,509 + A4249_RS02800 0.42 +0.8 594,509 + A4249_RS02800 0.42 +1.7 594,510 - A4249_RS02800 0.42 +0.3 594,532 + A4249_RS02800 0.44 +0.0 594,532 + A4249_RS02800 0.44 +0.1 594,532 + A4249_RS02800 0.44 -0.1 594,533 - A4249_RS02800 0.44 -0.3 594,533 - A4249_RS02800 0.44 -0.2 594,533 - A4249_RS02800 0.44 +0.7 594,533 - A4249_RS02800 0.44 -0.2 595,013 - -1.3 595,537 - -1.0 595,541 + -1.2 595,541 + -0.3 595,542 - +0.7 595,557 + -0.0 595,557 + +0.6 595,557 + -1.0 595,557 + -1.7 595,557 + +0.3 595,690 - A4249_RS02810 0.16 -0.1 595,780 + A4249_RS02810 0.26 +0.6 595,780 + A4249_RS02810 0.26 -0.2 595,780 + A4249_RS02810 0.26 -1.4 595,781 - A4249_RS02810 0.27 -0.9 595,781 - A4249_RS02810 0.27 +1.0 595,781 - A4249_RS02810 0.27 -0.0 595,781 - A4249_RS02810 0.27 +1.0
Or see this region's nucleotide sequence