Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01460 and A4249_RS01465 are separated by 105 nucleotides A4249_RS01465 and A4249_RS01470 are separated by 13 nucleotides A4249_RS01470 and A4249_RS01480 are separated by 894 nucleotides
A4249_RS01460: A4249_RS01460 - signal peptide peptidase SppA, at 269,986 to 271,764
_RS01460
A4249_RS01465: A4249_RS01465 - hypothetical protein, at 271,870 to 272,193
_RS01465
A4249_RS01470: A4249_RS01470 - N-acetylmuramoyl-L-alanine amidase, at 272,207 to 272,968
_RS01470
A4249_RS01480: A4249_RS01480 - cell division protein MraZ, at 273,863 to 274,339
_RS01480
Position (kb) 272
273 Strain fitness (log2 ratio) -2
-1
0
1
2 at 271.263 kb on + strand, within A4249_RS01460 at 272.140 kb on + strand, within A4249_RS01465 at 272.140 kb on + strand, within A4249_RS01465 at 272.140 kb on + strand, within A4249_RS01465 at 272.140 kb on + strand, within A4249_RS01465 at 272.140 kb on + strand, within A4249_RS01465 at 272.141 kb on - strand, within A4249_RS01465 at 272.141 kb on - strand, within A4249_RS01465 at 272.141 kb on - strand, within A4249_RS01465 at 272.141 kb on - strand, within A4249_RS01465 at 272.216 kb on + strand at 272.216 kb on + strand at 272.216 kb on + strand at 272.958 kb on + strand at 272.959 kb on - strand at 273.378 kb on - strand at 273.378 kb on - strand at 273.378 kb on - strand at 273.378 kb on - strand at 273.378 kb on - strand at 273.394 kb on - strand at 273.433 kb on - strand at 273.492 kb on - strand at 273.492 kb on - strand at 273.504 kb on + strand at 273.504 kb on + strand at 273.505 kb on - strand at 273.505 kb on - strand at 273.505 kb on - strand at 273.541 kb on + strand at 273.541 kb on + strand at 273.613 kb on - strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.634 kb on - strand at 273.656 kb on + strand at 273.656 kb on + strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.674 kb on + strand at 273.699 kb on + strand at 273.699 kb on + strand at 273.699 kb on + strand at 273.699 kb on + strand at 273.700 kb on - strand at 273.700 kb on - strand at 273.700 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 271,263 + A4249_RS01460 0.72 -0.0 272,140 + A4249_RS01465 0.83 -0.2 272,140 + A4249_RS01465 0.83 -0.3 272,140 + A4249_RS01465 0.83 -0.0 272,140 + A4249_RS01465 0.83 +0.6 272,140 + A4249_RS01465 0.83 -0.0 272,141 - A4249_RS01465 0.84 +0.5 272,141 - A4249_RS01465 0.84 +2.2 272,141 - A4249_RS01465 0.84 +2.2 272,141 - A4249_RS01465 0.84 +1.2 272,216 + +0.3 272,216 + -0.1 272,216 + -0.0 272,958 + +0.8 272,959 - +1.5 273,378 - -0.2 273,378 - +0.7 273,378 - -2.4 273,378 - -0.2 273,378 - -0.1 273,394 - +0.5 273,433 - -1.2 273,492 - +0.6 273,492 - -0.1 273,504 + +0.1 273,504 + +0.1 273,505 - +0.4 273,505 - -0.2 273,505 - -0.1 273,541 + -0.2 273,541 + -0.5 273,613 - +0.6 273,633 + -0.1 273,633 + +0.6 273,633 + +0.2 273,633 + +0.5 273,633 + +0.8 273,633 + -0.4 273,633 + -1.2 273,634 - -0.0 273,656 + +0.2 273,656 + +1.5 273,657 - -0.0 273,657 - -0.8 273,657 - +0.3 273,657 - -0.2 273,657 - +0.1 273,674 + -0.3 273,699 + +0.3 273,699 + -0.3 273,699 + +0.5 273,699 + -2.5 273,700 - +0.1 273,700 - -0.3 273,700 - +0.2
Or see this region's nucleotide sequence