Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00480 and A4249_RS00485 overlap by 17 nucleotides A4249_RS00485 and A4249_RS00490 overlap by 1 nucleotides A4249_RS00490 and A4249_RS00495 are separated by 91 nucleotides A4249_RS00495 and A4249_RS00500 are separated by 5 nucleotides A4249_RS00500 and A4249_RS00505 are separated by 56 nucleotides A4249_RS00505 and A4249_RS00510 overlap by 4 nucleotides
A4249_RS00480: A4249_RS00480 - hypothetical protein, at 81,832 to 82,242
_RS00480
A4249_RS00485: A4249_RS00485 - thioesterase family protein, at 82,226 to 82,666
_RS00485
A4249_RS00490: A4249_RS00490 - Grx4 family monothiol glutaredoxin, at 82,666 to 83,019
_RS00490
A4249_RS00495: A4249_RS00495 - aldo/keto reductase, at 83,111 to 84,013
_RS00495
A4249_RS00500: A4249_RS00500 - BolA family transcriptional regulator, at 84,019 to 84,261
_RS00500
A4249_RS00505: A4249_RS00505 - GNAT family N-acetyltransferase, at 84,318 to 84,842
_RS00505
A4249_RS00510: A4249_RS00510 - DNA repair protein RadC, at 84,839 to 85,591
_RS00510
Position (kb) 83
84
85 Strain fitness (log2 ratio) -2
-1
0
1
2 at 82.183 kb on + strand, within A4249_RS00480 at 82.183 kb on + strand, within A4249_RS00480 at 82.183 kb on + strand, within A4249_RS00480 at 82.183 kb on + strand, within A4249_RS00480 at 82.184 kb on - strand, within A4249_RS00480 at 82.184 kb on - strand, within A4249_RS00480 at 82.184 kb on - strand, within A4249_RS00480 at 82.184 kb on - strand, within A4249_RS00480 at 82.184 kb on - strand, within A4249_RS00480 at 82.184 kb on - strand, within A4249_RS00480 at 82.184 kb on - strand, within A4249_RS00480 at 82.241 kb on - strand at 82.368 kb on + strand, within A4249_RS00485 at 82.368 kb on + strand, within A4249_RS00485 at 82.368 kb on + strand, within A4249_RS00485 at 82.368 kb on + strand, within A4249_RS00485 at 82.368 kb on + strand, within A4249_RS00485 at 82.368 kb on + strand, within A4249_RS00485 at 82.369 kb on - strand, within A4249_RS00485 at 82.369 kb on - strand, within A4249_RS00485 at 82.369 kb on - strand, within A4249_RS00485 at 82.369 kb on - strand, within A4249_RS00485 at 82.369 kb on - strand, within A4249_RS00485 at 82.452 kb on + strand, within A4249_RS00485 at 82.453 kb on - strand, within A4249_RS00485 at 82.453 kb on - strand, within A4249_RS00485 at 82.453 kb on - strand, within A4249_RS00485 at 82.557 kb on + strand, within A4249_RS00485 at 82.558 kb on - strand, within A4249_RS00485 at 82.558 kb on - strand, within A4249_RS00485 at 82.558 kb on - strand, within A4249_RS00485 at 83.024 kb on - strand at 83.265 kb on + strand, within A4249_RS00495 at 83.265 kb on + strand, within A4249_RS00495 at 83.265 kb on + strand, within A4249_RS00495 at 83.265 kb on + strand, within A4249_RS00495 at 83.265 kb on + strand, within A4249_RS00495 at 83.265 kb on + strand, within A4249_RS00495 at 83.265 kb on + strand, within A4249_RS00495 at 83.265 kb on + strand, within A4249_RS00495 at 83.266 kb on - strand, within A4249_RS00495 at 83.266 kb on - strand, within A4249_RS00495 at 83.266 kb on - strand, within A4249_RS00495 at 83.266 kb on - strand, within A4249_RS00495 at 83.307 kb on + strand, within A4249_RS00495 at 83.398 kb on + strand, within A4249_RS00495 at 83.398 kb on + strand, within A4249_RS00495 at 83.398 kb on + strand, within A4249_RS00495 at 83.399 kb on - strand, within A4249_RS00495 at 83.399 kb on - strand, within A4249_RS00495 at 83.424 kb on + strand, within A4249_RS00495 at 83.424 kb on + strand, within A4249_RS00495 at 83.424 kb on + strand, within A4249_RS00495 at 83.424 kb on + strand, within A4249_RS00495 at 83.425 kb on - strand, within A4249_RS00495 at 83.425 kb on - strand, within A4249_RS00495 at 83.425 kb on - strand, within A4249_RS00495 at 83.425 kb on - strand, within A4249_RS00495 at 83.433 kb on + strand, within A4249_RS00495 at 83.547 kb on + strand, within A4249_RS00495 at 83.547 kb on + strand, within A4249_RS00495 at 83.547 kb on + strand, within A4249_RS00495 at 83.547 kb on + strand, within A4249_RS00495 at 83.547 kb on + strand, within A4249_RS00495 at 83.547 kb on + strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.548 kb on - strand, within A4249_RS00495 at 83.796 kb on + strand, within A4249_RS00495 at 83.796 kb on + strand, within A4249_RS00495 at 83.796 kb on + strand, within A4249_RS00495 at 83.796 kb on + strand, within A4249_RS00495 at 83.796 kb on + strand, within A4249_RS00495 at 83.796 kb on + strand, within A4249_RS00495 at 83.797 kb on - strand, within A4249_RS00495 at 83.797 kb on - strand, within A4249_RS00495 at 83.797 kb on - strand, within A4249_RS00495 at 83.797 kb on - strand, within A4249_RS00495 at 83.797 kb on - strand, within A4249_RS00495 at 83.797 kb on - strand, within A4249_RS00495 at 83.874 kb on + strand, within A4249_RS00495 at 83.874 kb on + strand, within A4249_RS00495 at 83.875 kb on - strand, within A4249_RS00495 at 83.875 kb on - strand, within A4249_RS00495 at 83.904 kb on + strand, within A4249_RS00495 at 83.904 kb on + strand, within A4249_RS00495 at 83.904 kb on + strand, within A4249_RS00495 at 83.904 kb on + strand, within A4249_RS00495 at 83.905 kb on - strand, within A4249_RS00495 at 83.905 kb on - strand, within A4249_RS00495 at 84.098 kb on + strand, within A4249_RS00500 at 84.098 kb on + strand, within A4249_RS00500 at 84.098 kb on + strand, within A4249_RS00500 at 84.098 kb on + strand, within A4249_RS00500 at 84.098 kb on + strand, within A4249_RS00500 at 84.099 kb on - strand, within A4249_RS00500 at 84.099 kb on - strand, within A4249_RS00500 at 84.099 kb on - strand, within A4249_RS00500 at 84.099 kb on - strand, within A4249_RS00500 at 84.099 kb on - strand, within A4249_RS00500 at 84.099 kb on - strand, within A4249_RS00500 at 84.099 kb on - strand, within A4249_RS00500 at 84.165 kb on - strand, within A4249_RS00500 at 84.165 kb on - strand, within A4249_RS00500 at 84.274 kb on + strand at 84.275 kb on - strand at 84.275 kb on - strand at 84.275 kb on - strand at 84.308 kb on + strand at 84.319 kb on + strand at 84.320 kb on - strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.367 kb on + strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.368 kb on - strand at 84.383 kb on - strand, within A4249_RS00505 at 84.383 kb on - strand, within A4249_RS00505 at 84.616 kb on + strand, within A4249_RS00505 at 84.616 kb on + strand, within A4249_RS00505 at 84.616 kb on + strand, within A4249_RS00505 at 84.617 kb on - strand, within A4249_RS00505 at 84.617 kb on - strand, within A4249_RS00505 at 84.663 kb on - strand, within A4249_RS00505 at 84.914 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 82,183 + A4249_RS00480 0.85 +0.1 82,183 + A4249_RS00480 0.85 -0.3 82,183 + A4249_RS00480 0.85 +0.1 82,183 + A4249_RS00480 0.85 +0.2 82,184 - A4249_RS00480 0.86 -0.6 82,184 - A4249_RS00480 0.86 +0.2 82,184 - A4249_RS00480 0.86 +0.2 82,184 - A4249_RS00480 0.86 +0.4 82,184 - A4249_RS00480 0.86 -0.8 82,184 - A4249_RS00480 0.86 -0.5 82,184 - A4249_RS00480 0.86 -0.0 82,241 - -0.0 82,368 + A4249_RS00485 0.32 +0.1 82,368 + A4249_RS00485 0.32 -0.4 82,368 + A4249_RS00485 0.32 -0.5 82,368 + A4249_RS00485 0.32 +0.2 82,368 + A4249_RS00485 0.32 +0.0 82,368 + A4249_RS00485 0.32 +0.2 82,369 - A4249_RS00485 0.32 -0.2 82,369 - A4249_RS00485 0.32 -0.3 82,369 - A4249_RS00485 0.32 -0.3 82,369 - A4249_RS00485 0.32 +0.2 82,369 - A4249_RS00485 0.32 +0.6 82,452 + A4249_RS00485 0.51 +0.4 82,453 - A4249_RS00485 0.51 +0.8 82,453 - A4249_RS00485 0.51 +0.1 82,453 - A4249_RS00485 0.51 +1.5 82,557 + A4249_RS00485 0.75 +0.1 82,558 - A4249_RS00485 0.75 -0.0 82,558 - A4249_RS00485 0.75 +0.5 82,558 - A4249_RS00485 0.75 -0.4 83,024 - -1.2 83,265 + A4249_RS00495 0.17 -0.2 83,265 + A4249_RS00495 0.17 -0.8 83,265 + A4249_RS00495 0.17 -0.2 83,265 + A4249_RS00495 0.17 +0.1 83,265 + A4249_RS00495 0.17 +0.7 83,265 + A4249_RS00495 0.17 -1.2 83,265 + A4249_RS00495 0.17 -0.6 83,265 + A4249_RS00495 0.17 -0.2 83,266 - A4249_RS00495 0.17 -0.5 83,266 - A4249_RS00495 0.17 +0.1 83,266 - A4249_RS00495 0.17 -0.2 83,266 - A4249_RS00495 0.17 +0.4 83,307 + A4249_RS00495 0.22 +0.6 83,398 + A4249_RS00495 0.32 -0.7 83,398 + A4249_RS00495 0.32 +0.7 83,398 + A4249_RS00495 0.32 -0.2 83,399 - A4249_RS00495 0.32 -0.4 83,399 - A4249_RS00495 0.32 +0.0 83,424 + A4249_RS00495 0.35 +0.2 83,424 + A4249_RS00495 0.35 -0.1 83,424 + A4249_RS00495 0.35 -0.8 83,424 + A4249_RS00495 0.35 -0.4 83,425 - A4249_RS00495 0.35 -0.6 83,425 - A4249_RS00495 0.35 +0.5 83,425 - A4249_RS00495 0.35 +0.0 83,425 - A4249_RS00495 0.35 -0.1 83,433 + A4249_RS00495 0.36 +0.2 83,547 + A4249_RS00495 0.48 -0.4 83,547 + A4249_RS00495 0.48 -0.3 83,547 + A4249_RS00495 0.48 +0.0 83,547 + A4249_RS00495 0.48 -0.3 83,547 + A4249_RS00495 0.48 +0.4 83,547 + A4249_RS00495 0.48 +1.5 83,548 - A4249_RS00495 0.48 -0.1 83,548 - A4249_RS00495 0.48 -0.0 83,548 - A4249_RS00495 0.48 +0.3 83,548 - A4249_RS00495 0.48 -0.6 83,548 - A4249_RS00495 0.48 -0.2 83,548 - A4249_RS00495 0.48 -0.4 83,548 - A4249_RS00495 0.48 +0.3 83,548 - A4249_RS00495 0.48 +0.1 83,548 - A4249_RS00495 0.48 +0.2 83,548 - A4249_RS00495 0.48 -0.5 83,796 + A4249_RS00495 0.76 +0.0 83,796 + A4249_RS00495 0.76 -1.6 83,796 + A4249_RS00495 0.76 -1.4 83,796 + A4249_RS00495 0.76 +0.1 83,796 + A4249_RS00495 0.76 +0.4 83,796 + A4249_RS00495 0.76 +0.2 83,797 - A4249_RS00495 0.76 -0.1 83,797 - A4249_RS00495 0.76 -0.6 83,797 - A4249_RS00495 0.76 -0.2 83,797 - A4249_RS00495 0.76 -0.2 83,797 - A4249_RS00495 0.76 -0.1 83,797 - A4249_RS00495 0.76 +0.3 83,874 + A4249_RS00495 0.84 +0.1 83,874 + A4249_RS00495 0.84 +0.3 83,875 - A4249_RS00495 0.85 +0.5 83,875 - A4249_RS00495 0.85 -0.0 83,904 + A4249_RS00495 0.88 +0.3 83,904 + A4249_RS00495 0.88 -1.0 83,904 + A4249_RS00495 0.88 -0.3 83,904 + A4249_RS00495 0.88 -0.1 83,905 - A4249_RS00495 0.88 -0.1 83,905 - A4249_RS00495 0.88 +1.0 84,098 + A4249_RS00500 0.33 -0.2 84,098 + A4249_RS00500 0.33 -0.6 84,098 + A4249_RS00500 0.33 +0.1 84,098 + A4249_RS00500 0.33 -0.0 84,098 + A4249_RS00500 0.33 -0.1 84,099 - A4249_RS00500 0.33 +0.8 84,099 - A4249_RS00500 0.33 -0.4 84,099 - A4249_RS00500 0.33 -0.4 84,099 - A4249_RS00500 0.33 +1.1 84,099 - A4249_RS00500 0.33 +0.3 84,099 - A4249_RS00500 0.33 -0.2 84,099 - A4249_RS00500 0.33 +0.3 84,165 - A4249_RS00500 0.60 -1.8 84,165 - A4249_RS00500 0.60 +0.1 84,274 + -0.8 84,275 - +2.2 84,275 - +1.3 84,275 - +0.5 84,308 + +0.6 84,319 + +0.2 84,320 - +0.7 84,367 + +1.5 84,367 + +0.2 84,367 + +0.0 84,367 + +0.0 84,367 + -0.2 84,367 + +0.2 84,367 + -0.6 84,367 + +0.7 84,367 + -1.1 84,367 + -0.8 84,367 + +0.7 84,367 + +0.0 84,367 + -0.8 84,368 - -0.3 84,368 - -0.1 84,368 - -0.1 84,368 - +0.3 84,368 - +0.3 84,368 - +0.2 84,368 - +0.1 84,368 - -0.2 84,368 - +0.8 84,383 - A4249_RS00505 0.12 -1.8 84,383 - A4249_RS00505 0.12 -0.2 84,616 + A4249_RS00505 0.57 -0.0 84,616 + A4249_RS00505 0.57 -0.6 84,616 + A4249_RS00505 0.57 -0.4 84,617 - A4249_RS00505 0.57 -0.2 84,617 - A4249_RS00505 0.57 -0.3 84,663 - A4249_RS00505 0.66 +0.4 84,914 - -0.2
Or see this region's nucleotide sequence