Strain Fitness in Escherichia coli ECOR38 around HEPCGN_05700

Experiment: Bas38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas38
1,013,281	+	ydhV	HEPCGN_05690	0.86	+0.8
1,013,298	-	ydhV	HEPCGN_05690	0.87	+0.2
1,013,298	-	ydhV	HEPCGN_05690	0.87	+0.2
1,013,327	-	ydhV	HEPCGN_05690	0.89	+0.3
1,013,327	-	ydhV	HEPCGN_05690	0.89	+0.8
1,013,348	-	ydhV	HEPCGN_05690	0.90	+0.2
1,013,425	+				+0.1
1,013,819	-	ydhW	HEPCGN_05695	0.38	-0.0
1,013,874	-	ydhW	HEPCGN_05695	0.46	-0.5
1,013,876	+	ydhW	HEPCGN_05695	0.46	-0.2
1,013,876	+	ydhW	HEPCGN_05695	0.46	-0.2
1,013,877	-	ydhW	HEPCGN_05695	0.47	-1.2
1,013,987	+	ydhW	HEPCGN_05695	0.64	+2.7
1,013,988	-	ydhW	HEPCGN_05695	0.64	-0.8
1,014,029	+	ydhW	HEPCGN_05695	0.70	+0.9
1,014,032	+	ydhW	HEPCGN_05695	0.71	+0.7
1,014,032	+	ydhW	HEPCGN_05695	0.71	+0.1
1,014,032	+	ydhW	HEPCGN_05695	0.71	-0.8
1,014,033	-	ydhW	HEPCGN_05695	0.71	+0.7
1,014,033	-	ydhW	HEPCGN_05695	0.71	-0.2
1,014,033	-	ydhW	HEPCGN_05695	0.71	-0.2
1,014,100	-	ydhW	HEPCGN_05695	0.82	+0.8
1,014,131	+	ydhW	HEPCGN_05695	0.86	+0.5
1,014,131	+	ydhW	HEPCGN_05695	0.86	+0.5
1,014,151	+	ydhW	HEPCGN_05695	0.90	+0.7
1,014,325	-				-1.1
1,014,430	+		HEPCGN_05700	0.22	+0.2
1,014,486	+		HEPCGN_05700	0.31	-1.1
1,014,666	-		HEPCGN_05700	0.58	+0.9
1,014,666	-		HEPCGN_05700	0.58	+0.0
1,014,686	+		HEPCGN_05700	0.61	-0.0
1,014,715	+		HEPCGN_05700	0.65	+0.6
1,014,728	-		HEPCGN_05700	0.67	-0.4
1,014,728	-		HEPCGN_05700	0.67	-0.1
1,014,826	+		HEPCGN_05700	0.81	+0.6
1,014,866	+		HEPCGN_05700	0.87	-0.5
1,014,994	+				+0.3
1,014,995	-				+1.0
1,014,995	-				+0.3
1,015,199	+	ydhU	HEPCGN_05705	0.32	-0.7
1,015,200	-	ydhU	HEPCGN_05705	0.32	-0.9
1,015,474	-	ydhU	HEPCGN_05705	0.67	-0.3
1,015,481	+	ydhU	HEPCGN_05705	0.68	-0.8
1,015,495	+	ydhU	HEPCGN_05705	0.70	-0.3
1,015,496	-	ydhU	HEPCGN_05705	0.70	+0.9
1,015,498	-	ydhU	HEPCGN_05705	0.70	-0.4
1,015,510	+	ydhU	HEPCGN_05705	0.72	+0.7
1,015,601	+	ydhU	HEPCGN_05705	0.83	-0.3
1,015,602	-	ydhU	HEPCGN_05705	0.83	-0.9
1,015,629	+	ydhU	HEPCGN_05705	0.87	+1.2
1,015,632	-	ydhU	HEPCGN_05705	0.87	-0.1
1,015,632	-	ydhU	HEPCGN_05705	0.87	+0.2
1,015,787	-				-0.4
1,015,825	+				-2.4
1,015,825	+				+0.1
1,015,825	+				+1.3
1,015,861	+	ydhT	HEPCGN_05710	0.10	+0.6
1,015,864	-	ydhT	HEPCGN_05710	0.11	+0.4
1,015,891	+	ydhT	HEPCGN_05710	0.14	-0.7
1,015,891	+	ydhT	HEPCGN_05710	0.14	+0.0
1,015,892	-	ydhT	HEPCGN_05710	0.14	+0.9
1,015,945	+	ydhT	HEPCGN_05710	0.21	+0.4
1,015,945	+	ydhT	HEPCGN_05710	0.21	+0.7
1,015,945	+	ydhT	HEPCGN_05710	0.21	-0.6
1,015,946	-	ydhT	HEPCGN_05710	0.21	-0.6
1,015,946	-	ydhT	HEPCGN_05710	0.21	-0.3
1,015,948	-	ydhT	HEPCGN_05710	0.22	-0.1