Strain Fitness in Escherichia coli ECRC102 around NIAGMN_23710

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
4,631,607	+	rutE	NIAGMN_23700	0.73	+1.3
4,631,607	+	rutE	NIAGMN_23700	0.73	+3.7
4,631,800	+				-0.2
4,631,801	-				+0.5
4,631,836	-				+0.1
4,632,180	-	rutD	NIAGMN_23705	0.50	-0.2
4,632,395	+	rutD	NIAGMN_23705	0.77	-1.3
4,632,452	-	rutD	NIAGMN_23705	0.84	-0.7
4,632,452	-	rutD	NIAGMN_23705	0.84	-0.4
4,632,596	-				-1.2
4,632,671	-	rutC	NIAGMN_23710	0.22	+0.3
4,632,786	-	rutC	NIAGMN_23710	0.52	-0.1
4,632,885	+	rutC	NIAGMN_23710	0.78	-0.8
4,632,885	+	rutC	NIAGMN_23710	0.78	-1.9
4,632,885	+	rutC	NIAGMN_23710	0.78	-1.1
4,632,886	-	rutC	NIAGMN_23710	0.78	-0.7
4,632,886	-	rutC	NIAGMN_23710	0.78	-1.5
4,632,886	-	rutC	NIAGMN_23710	0.78	-3.6
4,632,974	+				+0.4
4,633,139	+	rutB	NIAGMN_23715	0.23	+0.4
4,633,268	+	rutB	NIAGMN_23715	0.41	+2.8
4,633,377	+	rutB	NIAGMN_23715	0.57	-0.3
4,633,442	+	rutB	NIAGMN_23715	0.66	-0.3
4,633,568	-	rutB	NIAGMN_23715	0.84	+0.1
4,633,571	+	rutB	NIAGMN_23715	0.85	-0.8
4,633,572	-	rutB	NIAGMN_23715	0.85	+0.3
4,633,590	-	rutB	NIAGMN_23715	0.87	+1.3