Strain Fitness in Escherichia coli ECRC102 around NIAGMN_20610

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
4,069,477	+	lrhA	NIAGMN_20600	0.66	+0.9
4,069,478	-	lrhA	NIAGMN_20600	0.66	-3.1
4,069,480	+	lrhA	NIAGMN_20600	0.66	-3.0
4,069,480	+	lrhA	NIAGMN_20600	0.66	+1.3
4,069,480	+	lrhA	NIAGMN_20600	0.66	-0.7
4,069,489	+	lrhA	NIAGMN_20600	0.67	+0.1
4,069,508	+	lrhA	NIAGMN_20600	0.69	-1.7
4,069,508	+	lrhA	NIAGMN_20600	0.69	-1.3
4,069,508	+	lrhA	NIAGMN_20600	0.69	+1.0
4,069,509	-	lrhA	NIAGMN_20600	0.69	+1.2
4,069,617	+	lrhA	NIAGMN_20600	0.81	-2.9
4,069,626	+	lrhA	NIAGMN_20600	0.82	-0.2
4,069,650	-	lrhA	NIAGMN_20600	0.84	+1.4
4,069,650	-	lrhA	NIAGMN_20600	0.84	-1.9
4,069,661	+	lrhA	NIAGMN_20600	0.85	-0.8
4,069,661	+	lrhA	NIAGMN_20600	0.85	-0.4
4,069,662	-	lrhA	NIAGMN_20600	0.85	+2.3
4,069,662	-	lrhA	NIAGMN_20600	0.85	+1.0
4,069,678	+	lrhA	NIAGMN_20600	0.87	+0.3
4,069,700	+	lrhA	NIAGMN_20600	0.89	-0.9
4,069,700	+	lrhA	NIAGMN_20600	0.89	-0.6
4,069,700	+	lrhA	NIAGMN_20600	0.89	-0.3
4,069,700	+	lrhA	NIAGMN_20600	0.89	-3.3
4,069,701	-	lrhA	NIAGMN_20600	0.90	-0.4
4,069,718	+				-0.4
4,069,718	+				-1.9
4,069,723	+				-1.7
4,069,736	+				-2.7
4,069,736	+				+0.8
4,069,746	+				+3.8
4,069,810	+				-1.9
4,069,810	+				-2.6
4,069,829	+				+0.7
4,069,967	+				-2.2
4,070,074	-		NIAGMN_20605	0.44	-2.0
4,070,168	+				-0.7
4,070,168	+				+1.6
4,070,168	+				-2.7
4,070,168	+				-0.7
4,070,169	-				-1.1
4,070,169	-				+0.3
4,070,169	-				+0.8
4,070,169	-				+0.5
4,070,169	-				+0.9
4,070,169	-				-2.7
4,070,169	-				-2.2
4,070,291	-				-0.7
4,070,308	-				-1.0
4,070,313	+				-1.9
4,070,313	+				+0.2
4,070,315	+				+3.6
4,070,315	+				-2.5
4,070,315	+				+2.6
4,070,423	+				+1.4
4,070,423	+				-2.5
4,070,424	-				-0.2
4,070,434	+				-0.7
4,070,434	+				+0.1
4,070,434	+				+0.3
4,070,434	+				-2.1
4,070,434	+				+0.9
4,070,488	+	nuoA	NIAGMN_20610	0.13	+1.6
4,070,505	+	nuoA	NIAGMN_20610	0.17	-0.9
4,070,506	-	nuoA	NIAGMN_20610	0.17	-0.2
4,070,657	-	nuoA	NIAGMN_20610	0.51	-1.4
4,070,679	-	nuoA	NIAGMN_20610	0.56	-1.1
4,070,679	-	nuoA	NIAGMN_20610	0.56	-1.5
4,070,758	-	nuoA	NIAGMN_20610	0.74	+0.1
4,070,774	+	nuoA	NIAGMN_20610	0.78	-1.3
4,070,830	+				-2.5
4,070,830	+				-2.0
4,070,831	-				-0.4
4,070,885	-				-2.5
4,070,885	-				-1.9
4,070,885	-				-1.6
4,070,885	-				+0.6
4,070,885	-				+1.6
4,070,896	+				+1.3
4,070,897	-				+2.1
4,070,897	-				-2.0
4,070,897	-				-2.0
4,070,910	+				-1.7
4,070,910	+				-0.6
4,070,961	+	nuoB	NIAGMN_20615	0.11	+1.0
4,071,001	+	nuoB	NIAGMN_20615	0.17	-0.4
4,071,002	-	nuoB	NIAGMN_20615	0.17	+1.0
4,071,059	-	nuoB	NIAGMN_20615	0.26	+0.3
4,071,059	-	nuoB	NIAGMN_20615	0.26	+1.6
4,071,080	+	nuoB	NIAGMN_20615	0.29	-2.0
4,071,141	+	nuoB	NIAGMN_20615	0.38	-3.1
4,071,142	-	nuoB	NIAGMN_20615	0.38	-2.4
4,071,289	+	nuoB	NIAGMN_20615	0.60	-0.4
4,071,289	+	nuoB	NIAGMN_20615	0.60	+1.8
4,071,289	+	nuoB	NIAGMN_20615	0.60	+1.9
4,071,290	-	nuoB	NIAGMN_20615	0.61	+2.1
4,071,293	+	nuoB	NIAGMN_20615	0.61	-1.0
4,071,293	+	nuoB	NIAGMN_20615	0.61	+1.0
4,071,293	+	nuoB	NIAGMN_20615	0.61	-2.5
4,071,294	-	nuoB	NIAGMN_20615	0.61	+0.6
4,071,294	-	nuoB	NIAGMN_20615	0.61	-0.7
4,071,347	+	nuoB	NIAGMN_20615	0.69	+1.6
4,071,347	+	nuoB	NIAGMN_20615	0.69	+1.1
4,071,347	+	nuoB	NIAGMN_20615	0.69	+2.6
4,071,347	+	nuoB	NIAGMN_20615	0.69	+1.6
4,071,347	+	nuoB	NIAGMN_20615	0.69	-2.4
4,071,348	-	nuoB	NIAGMN_20615	0.69	+0.6
4,071,348	-	nuoB	NIAGMN_20615	0.69	+0.8
4,071,380	+	nuoB	NIAGMN_20615	0.74	-0.9
4,071,381	-	nuoB	NIAGMN_20615	0.74	+1.8
4,071,381	-	nuoB	NIAGMN_20615	0.74	+0.6
4,071,532	+				+3.0
4,071,532	+				-1.7
4,071,585	+				-1.5
4,071,592	-				-1.1
4,071,592	-				+2.7
4,071,655	+				+1.4
4,071,655	+				-0.0
4,071,655	+				+1.3
4,071,667	-				-0.2
4,071,855	-	nuoC	NIAGMN_20620	0.12	+0.6
4,071,855	-	nuoC	NIAGMN_20620	0.12	+0.6