Strain Fitness in Escherichia coli ECRC102 around NIAGMN_17915

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,539,507	+	fucR	NIAGMN_17905	0.38	-1.7
3,539,517	-	fucR	NIAGMN_17905	0.39	-0.0
3,539,643	-	fucR	NIAGMN_17905	0.56	+0.7
3,539,790	+	fucR	NIAGMN_17905	0.77	+1.1
3,539,792	+	fucR	NIAGMN_17905	0.77	+1.1
3,539,793	-	fucR	NIAGMN_17905	0.77	-1.2
3,539,793	-	fucR	NIAGMN_17905	0.77	-2.9
3,539,796	+	fucR	NIAGMN_17905	0.77	-0.7
3,539,869	-	fucR	NIAGMN_17905	0.87	-3.2
3,539,878	+	fucR	NIAGMN_17905	0.89	-0.5
3,539,878	+	fucR	NIAGMN_17905	0.89	+0.4
3,540,049	-				+0.9
3,540,049	-				-1.6
3,540,057	-				-0.6
3,540,110	+	fucU	NIAGMN_17910	0.22	-1.2
3,540,110	+	fucU	NIAGMN_17910	0.22	-0.3
3,540,111	-	fucU	NIAGMN_17910	0.22	-1.1
3,540,158	-	fucU	NIAGMN_17910	0.33	+2.3
3,540,171	+	fucU	NIAGMN_17910	0.36	-0.5
3,540,214	+	fucU	NIAGMN_17910	0.46	-1.5
3,540,214	+	fucU	NIAGMN_17910	0.46	+0.4
3,540,246	-	fucU	NIAGMN_17910	0.54	-0.6
3,540,246	-	fucU	NIAGMN_17910	0.54	+0.5
3,540,263	-	fucU	NIAGMN_17910	0.58	-0.7
3,540,364	-	fucU	NIAGMN_17910	0.82	+1.7
3,540,404	-				+0.7
3,540,458	-				+0.5
3,540,458	-				+1.4
3,540,614	-	fucK	NIAGMN_17915	0.12	+0.3
3,540,622	+	fucK	NIAGMN_17915	0.13	-3.8
3,540,622	+	fucK	NIAGMN_17915	0.13	+1.3
3,540,623	-	fucK	NIAGMN_17915	0.13	+0.7
3,540,671	+	fucK	NIAGMN_17915	0.16	-0.5
3,540,691	+	fucK	NIAGMN_17915	0.17	+1.8
3,540,692	-	fucK	NIAGMN_17915	0.18	+0.6
3,540,692	-	fucK	NIAGMN_17915	0.18	-1.2
3,540,720	-	fucK	NIAGMN_17915	0.20	-0.1
3,540,732	-	fucK	NIAGMN_17915	0.20	-1.1
3,540,785	-	fucK	NIAGMN_17915	0.24	+0.1
3,540,828	-	fucK	NIAGMN_17915	0.27	-0.7
3,540,964	+	fucK	NIAGMN_17915	0.37	-2.0
3,540,964	+	fucK	NIAGMN_17915	0.37	-2.6
3,540,964	+	fucK	NIAGMN_17915	0.37	-0.8
3,540,964	+	fucK	NIAGMN_17915	0.37	-1.7
3,540,965	-	fucK	NIAGMN_17915	0.37	+0.2
3,540,965	-	fucK	NIAGMN_17915	0.37	+0.8
3,540,965	-	fucK	NIAGMN_17915	0.37	+1.3
3,540,965	-	fucK	NIAGMN_17915	0.37	-0.8
3,540,965	-	fucK	NIAGMN_17915	0.37	+1.0
3,540,975	+	fucK	NIAGMN_17915	0.37	+1.6
3,540,975	+	fucK	NIAGMN_17915	0.37	-0.2
3,540,975	+	fucK	NIAGMN_17915	0.37	+0.5
3,540,976	-	fucK	NIAGMN_17915	0.38	-1.9
3,540,976	-	fucK	NIAGMN_17915	0.38	-0.7
3,540,976	-	fucK	NIAGMN_17915	0.38	-0.6
3,540,976	-	fucK	NIAGMN_17915	0.38	-1.9
3,540,976	-	fucK	NIAGMN_17915	0.38	+0.2
3,541,025	+	fucK	NIAGMN_17915	0.41	+0.7
3,541,036	+	fucK	NIAGMN_17915	0.42	+1.2
3,541,037	-	fucK	NIAGMN_17915	0.42	-3.5
3,541,075	+	fucK	NIAGMN_17915	0.45	-3.2
3,541,076	-	fucK	NIAGMN_17915	0.45	-0.4
3,541,076	-	fucK	NIAGMN_17915	0.45	-0.3
3,541,161	-	fucK	NIAGMN_17915	0.51	+0.7
3,541,172	+	fucK	NIAGMN_17915	0.51	-0.5
3,541,207	+	fucK	NIAGMN_17915	0.54	+0.0
3,541,208	-	fucK	NIAGMN_17915	0.54	+1.3
3,541,384	+	fucK	NIAGMN_17915	0.66	+3.6
3,541,384	+	fucK	NIAGMN_17915	0.66	+1.3
3,541,385	-	fucK	NIAGMN_17915	0.66	-1.2
3,541,385	-	fucK	NIAGMN_17915	0.66	-2.1
3,541,447	+	fucK	NIAGMN_17915	0.71	-1.2
3,541,448	-	fucK	NIAGMN_17915	0.71	-0.2
3,541,448	-	fucK	NIAGMN_17915	0.71	-0.5
3,541,452	-	fucK	NIAGMN_17915	0.71	-1.5
3,541,522	+	fucK	NIAGMN_17915	0.76	+0.7
3,541,561	+	fucK	NIAGMN_17915	0.79	+0.4
3,541,561	+	fucK	NIAGMN_17915	0.79	-0.1
3,541,591	+	fucK	NIAGMN_17915	0.81	+0.5
3,541,596	-	fucK	NIAGMN_17915	0.81	+0.8
3,541,596	-	fucK	NIAGMN_17915	0.81	-0.2
3,541,838	+				+0.7
3,541,876	+				+2.9
3,541,876	+				-2.4
3,541,877	-				-2.1
3,541,878	+				+1.5
3,541,879	-				-2.7
3,541,886	+				-0.2
3,541,963	+				-0.3
3,541,964	-				-1.0
3,541,964	-				+0.8
3,541,964	-				-0.1
3,541,968	+				+0.9
3,541,968	+				+0.4
3,541,968	+				+0.9
3,541,968	+				-1.4
3,541,969	-				+0.6
3,541,969	-				+2.7
3,541,969	-				-0.4
3,541,969	-				-0.2
3,541,969	-				+1.4
3,541,972	-				+0.5
3,541,972	-				-2.1
3,541,972	-				+0.6
3,541,981	-				+3.0
3,541,992	+				+1.7
3,541,992	+				+0.2
3,541,993	-				+2.4
3,541,993	-				-0.2
3,541,993	-				+1.0
3,542,026	+				+1.5
3,542,089	+				-1.5
3,542,089	+				+0.4
3,542,089	+				-0.7
3,542,089	+				-2.5
3,542,089	+				-0.5
3,542,089	+				-0.1
3,542,089	+				-1.8
3,542,089	+				-1.5
3,542,089	+				-1.0
3,542,089	+				+1.8
3,542,089	+				-0.8
3,542,089	+				+0.1
3,542,089	+				+0.9
3,542,089	+				-2.6
3,542,089	+				+1.9
3,542,089	+				+0.8
3,542,089	+				-2.2
3,542,090	-				+2.4
3,542,090	-				+1.3
3,542,090	-				-1.9
3,542,090	-				+0.9
3,542,090	-				-0.4
3,542,090	-				+1.5
3,542,090	-				-2.9
3,542,090	-				+1.2
3,542,090	-				-1.6
3,542,090	-				+2.7
3,542,090	-				+0.8
3,542,090	-				-1.4
3,542,090	-				-1.1
3,542,090	-				+2.4
3,542,090	-				+0.0
3,542,090	-				-1.0
3,542,125	+				+0.4
3,542,194	-	fucI	NIAGMN_17920	0.13	+1.4
3,542,215	+	fucI	NIAGMN_17920	0.14	+1.4
3,542,410	-	fucI	NIAGMN_17920	0.25	-2.2
3,542,427	+	fucI	NIAGMN_17920	0.26	-2.9
3,542,428	-	fucI	NIAGMN_17920	0.26	-3.2
3,542,428	-	fucI	NIAGMN_17920	0.26	-2.6
3,542,519	-	fucI	NIAGMN_17920	0.31	-3.3
3,542,519	-	fucI	NIAGMN_17920	0.31	+1.2
3,542,615	-	fucI	NIAGMN_17920	0.36	+1.0
3,542,652	+	fucI	NIAGMN_17920	0.38	-0.4
3,542,652	+	fucI	NIAGMN_17920	0.38	+0.3
3,542,653	-	fucI	NIAGMN_17920	0.38	+2.4
3,542,653	-	fucI	NIAGMN_17920	0.38	+0.6
3,542,653	-	fucI	NIAGMN_17920	0.38	+0.3
3,542,656	+	fucI	NIAGMN_17920	0.39	+1.4
3,542,657	-	fucI	NIAGMN_17920	0.39	+1.2
3,542,657	-	fucI	NIAGMN_17920	0.39	-1.3
3,542,706	-	fucI	NIAGMN_17920	0.41	+1.6