Strain Fitness in Escherichia coli ECRC102 around NIAGMN_15325

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,034,881	+	yrdD	NIAGMN_15315	0.23	+0.3
3,034,881	+	yrdD	NIAGMN_15315	0.23	-0.2
3,034,881	+	yrdD	NIAGMN_15315	0.23	+0.4
3,034,916	+	yrdD	NIAGMN_15315	0.30	+1.6
3,034,916	+	yrdD	NIAGMN_15315	0.30	-1.4
3,034,917	-	yrdD	NIAGMN_15315	0.30	+0.0
3,034,969	+	yrdD	NIAGMN_15315	0.39	-0.6
3,034,972	+	yrdD	NIAGMN_15315	0.40	-0.9
3,034,973	-	yrdD	NIAGMN_15315	0.40	+1.4
3,034,992	-	yrdD	NIAGMN_15315	0.44	+0.6
3,034,997	+	yrdD	NIAGMN_15315	0.45	+1.5
3,034,998	-	yrdD	NIAGMN_15315	0.45	-0.4
3,035,009	+	yrdD	NIAGMN_15315	0.47	-1.4
3,035,009	+	yrdD	NIAGMN_15315	0.47	+1.5
3,035,009	+	yrdD	NIAGMN_15315	0.47	-0.7
3,035,009	+	yrdD	NIAGMN_15315	0.47	-2.6
3,035,010	-	yrdD	NIAGMN_15315	0.47	+0.8
3,035,010	-	yrdD	NIAGMN_15315	0.47	+1.7
3,035,013	+	yrdD	NIAGMN_15315	0.48	+0.0
3,035,030	+	yrdD	NIAGMN_15315	0.51	-3.2
3,035,030	+	yrdD	NIAGMN_15315	0.51	-3.6
3,035,066	+	yrdD	NIAGMN_15315	0.57	+2.0
3,035,066	+	yrdD	NIAGMN_15315	0.57	+0.1
3,035,066	+	yrdD	NIAGMN_15315	0.57	+3.8
3,035,066	+	yrdD	NIAGMN_15315	0.57	+0.2
3,035,066	+	yrdD	NIAGMN_15315	0.57	-2.1
3,035,066	+	yrdD	NIAGMN_15315	0.57	-2.5
3,035,066	+	yrdD	NIAGMN_15315	0.57	+0.1
3,035,066	+	yrdD	NIAGMN_15315	0.57	+0.1
3,035,066	+	yrdD	NIAGMN_15315	0.57	-0.1
3,035,067	-	yrdD	NIAGMN_15315	0.57	-0.3
3,035,067	-	yrdD	NIAGMN_15315	0.57	+0.3
3,035,067	-	yrdD	NIAGMN_15315	0.57	+1.0
3,035,067	-	yrdD	NIAGMN_15315	0.57	+1.1
3,035,067	-	yrdD	NIAGMN_15315	0.57	+2.0
3,035,067	-	yrdD	NIAGMN_15315	0.57	-3.5
3,035,067	-	yrdD	NIAGMN_15315	0.57	+1.3
3,035,182	+	yrdD	NIAGMN_15315	0.79	-0.2
3,035,182	+	yrdD	NIAGMN_15315	0.79	+0.2
3,035,182	+	yrdD	NIAGMN_15315	0.79	-0.9
3,035,215	+	yrdD	NIAGMN_15315	0.85	-0.7
3,035,245	+				-0.0
3,035,295	+				+2.2
3,035,872	+				+0.9
3,035,877	+				-2.3
3,035,877	+				-2.9
3,035,877	+				-1.5
3,035,878	-				-3.6
3,035,878	-				-3.1
3,035,888	+				-2.8
3,035,888	+				-2.1
3,035,888	+				-4.1
3,035,889	-				-2.5
3,035,889	-				-2.3
3,035,975	+	aroE	NIAGMN_15325	0.12	-4.6
3,036,031	+	aroE	NIAGMN_15325	0.19	-1.9
3,036,032	-	aroE	NIAGMN_15325	0.19	-1.1
3,036,043	+	aroE	NIAGMN_15325	0.20	-4.0
3,036,070	+	aroE	NIAGMN_15325	0.23	-3.1
3,036,103	+	aroE	NIAGMN_15325	0.27	-4.6
3,036,103	+	aroE	NIAGMN_15325	0.27	+0.5
3,036,189	+	aroE	NIAGMN_15325	0.38	-1.2
3,036,190	-	aroE	NIAGMN_15325	0.38	-1.5
3,036,190	-	aroE	NIAGMN_15325	0.38	-2.2
3,036,198	+	aroE	NIAGMN_15325	0.39	-1.3
3,036,237	+	aroE	NIAGMN_15325	0.44	-2.5
3,036,241	+	aroE	NIAGMN_15325	0.44	-2.9
3,036,282	+	aroE	NIAGMN_15325	0.49	-2.3
3,036,282	+	aroE	NIAGMN_15325	0.49	-1.8
3,036,283	-	aroE	NIAGMN_15325	0.49	-0.0
3,036,283	-	aroE	NIAGMN_15325	0.49	-3.8
3,036,283	-	aroE	NIAGMN_15325	0.49	-0.5
3,036,322	+	aroE	NIAGMN_15325	0.54	-2.7
3,036,355	+	aroE	NIAGMN_15325	0.58	-1.4
3,036,431	-	aroE	NIAGMN_15325	0.67	-1.9
3,036,433	+	aroE	NIAGMN_15325	0.68	-2.5
3,036,433	+	aroE	NIAGMN_15325	0.68	-1.2
3,036,433	+	aroE	NIAGMN_15325	0.68	-3.4
3,036,434	-	aroE	NIAGMN_15325	0.68	-0.9
3,036,434	-	aroE	NIAGMN_15325	0.68	-1.0
3,036,464	-	aroE	NIAGMN_15325	0.71	-0.6
3,036,464	-	aroE	NIAGMN_15325	0.71	-1.4
3,036,503	+	aroE	NIAGMN_15325	0.76	-2.5
3,036,503	+	aroE	NIAGMN_15325	0.76	-2.5
3,036,503	+	aroE	NIAGMN_15325	0.76	-2.9
3,036,504	-	aroE	NIAGMN_15325	0.76	-3.3
3,036,504	-	aroE	NIAGMN_15325	0.76	-1.9
3,036,504	-	aroE	NIAGMN_15325	0.76	-1.9
3,036,504	-	aroE	NIAGMN_15325	0.76	-3.5
3,036,504	-	aroE	NIAGMN_15325	0.76	-3.1
3,036,504	-	aroE	NIAGMN_15325	0.76	-0.2
3,036,504	-	aroE	NIAGMN_15325	0.76	-1.1
3,036,509	+	aroE	NIAGMN_15325	0.77	-1.4
3,036,509	+	aroE	NIAGMN_15325	0.77	-3.4
3,036,509	+	aroE	NIAGMN_15325	0.77	-1.1
3,036,509	+	aroE	NIAGMN_15325	0.77	-3.5
3,036,509	+	aroE	NIAGMN_15325	0.77	-3.3
3,036,510	-	aroE	NIAGMN_15325	0.77	-3.3
3,036,510	-	aroE	NIAGMN_15325	0.77	-1.3
3,036,510	-	aroE	NIAGMN_15325	0.77	-3.1
3,036,521	+	aroE	NIAGMN_15325	0.78	-4.4
3,036,577	+	aroE	NIAGMN_15325	0.85	-0.7
3,036,577	+	aroE	NIAGMN_15325	0.85	-2.5
3,036,578	-	aroE	NIAGMN_15325	0.85	-1.4
3,036,578	-	aroE	NIAGMN_15325	0.85	-2.3
3,036,578	-	aroE	NIAGMN_15325	0.85	-2.0
3,036,591	+	aroE	NIAGMN_15325	0.87	-4.6
3,036,654	+				-2.9
3,036,654	+				-1.4
3,036,654	+				-1.2
3,036,665	-				-1.0
3,036,665	-				-2.3
3,036,665	-				+0.4
3,036,665	-				-1.8
3,036,665	-				-2.0
3,036,667	-				-0.9
3,036,667	-				-2.6
3,036,667	-				-3.0
3,036,753	-	yrdB	NIAGMN_15330	0.23	+1.5
3,036,825	+	yrdB	NIAGMN_15330	0.51	-0.4
3,036,825	+	yrdB	NIAGMN_15330	0.51	+0.7
3,036,835	-	yrdB	NIAGMN_15330	0.55	+0.0
3,036,902	+	yrdB	NIAGMN_15330	0.81	-0.8
3,036,979	+				-2.7
3,036,979	+				+2.7
3,036,979	+				-0.1
3,036,983	+	yrdA	NIAGMN_15335	0.10	-0.9
3,036,983	+	yrdA	NIAGMN_15335	0.10	-1.9
3,036,983	+	yrdA	NIAGMN_15335	0.10	+0.4
3,036,994	+	yrdA	NIAGMN_15335	0.12	+3.1
3,036,994	+	yrdA	NIAGMN_15335	0.12	-0.5
3,036,995	-	yrdA	NIAGMN_15335	0.12	-0.7
3,037,023	+	yrdA	NIAGMN_15335	0.17	-1.6
3,037,023	+	yrdA	NIAGMN_15335	0.17	-2.4
3,037,024	-	yrdA	NIAGMN_15335	0.17	-3.4
3,037,057	+	yrdA	NIAGMN_15335	0.23	-2.0
3,037,058	-	yrdA	NIAGMN_15335	0.24	+2.0
3,037,064	-	yrdA	NIAGMN_15335	0.25	-0.9
3,037,083	-	yrdA	NIAGMN_15335	0.28	-1.8
3,037,128	+	yrdA	NIAGMN_15335	0.36	+0.8
3,037,128	+	yrdA	NIAGMN_15335	0.36	-2.0
3,037,128	+	yrdA	NIAGMN_15335	0.36	-1.4
3,037,128	+	yrdA	NIAGMN_15335	0.36	+0.9
3,037,128	+	yrdA	NIAGMN_15335	0.36	+3.2
3,037,128	+	yrdA	NIAGMN_15335	0.36	-0.2
3,037,129	-	yrdA	NIAGMN_15335	0.36	-0.8
3,037,129	-	yrdA	NIAGMN_15335	0.36	-0.6
3,037,129	-	yrdA	NIAGMN_15335	0.36	+1.0
3,037,129	-	yrdA	NIAGMN_15335	0.36	+0.9
3,037,129	-	yrdA	NIAGMN_15335	0.36	-0.4
3,037,131	+	yrdA	NIAGMN_15335	0.37	+2.7
3,037,131	+	yrdA	NIAGMN_15335	0.37	+1.7
3,037,132	-	yrdA	NIAGMN_15335	0.37	-2.8
3,037,132	-	yrdA	NIAGMN_15335	0.37	-1.4
3,037,146	+	yrdA	NIAGMN_15335	0.39	+2.5
3,037,147	-	yrdA	NIAGMN_15335	0.40	-0.8
3,037,147	-	yrdA	NIAGMN_15335	0.40	-3.8
3,037,261	+	yrdA	NIAGMN_15335	0.60	-1.3
3,037,261	+	yrdA	NIAGMN_15335	0.60	-0.4
3,037,262	-	yrdA	NIAGMN_15335	0.60	-2.0
3,037,262	-	yrdA	NIAGMN_15335	0.60	-0.9
3,037,262	-	yrdA	NIAGMN_15335	0.60	+0.3
3,037,262	-	yrdA	NIAGMN_15335	0.60	-1.5
3,037,262	-	yrdA	NIAGMN_15335	0.60	+0.2
3,037,272	-	yrdA	NIAGMN_15335	0.62	-2.1
3,037,272	-	yrdA	NIAGMN_15335	0.62	-2.7
3,037,289	+	yrdA	NIAGMN_15335	0.65	-1.0
3,037,289	+	yrdA	NIAGMN_15335	0.65	+0.6
3,037,289	+	yrdA	NIAGMN_15335	0.65	-1.9
3,037,290	-	yrdA	NIAGMN_15335	0.65	+0.5
3,037,290	-	yrdA	NIAGMN_15335	0.65	-0.4
3,037,290	-	yrdA	NIAGMN_15335	0.65	-0.1
3,037,290	-	yrdA	NIAGMN_15335	0.65	-1.2
3,037,330	+	yrdA	NIAGMN_15335	0.73	+1.6
3,037,330	+	yrdA	NIAGMN_15335	0.73	-1.5
3,037,330	+	yrdA	NIAGMN_15335	0.73	+1.9
3,037,330	+	yrdA	NIAGMN_15335	0.73	-2.9
3,037,331	-	yrdA	NIAGMN_15335	0.73	-0.4
3,037,331	-	yrdA	NIAGMN_15335	0.73	-1.9
3,037,331	-	yrdA	NIAGMN_15335	0.73	+1.4
3,037,331	-	yrdA	NIAGMN_15335	0.73	+2.8
3,037,331	-	yrdA	NIAGMN_15335	0.73	+1.1
3,037,331	-	yrdA	NIAGMN_15335	0.73	-1.0
3,037,331	-	yrdA	NIAGMN_15335	0.73	+1.2
3,037,331	-	yrdA	NIAGMN_15335	0.73	+0.4
3,037,331	-	yrdA	NIAGMN_15335	0.73	-0.6
3,037,331	-	yrdA	NIAGMN_15335	0.73	+0.7
3,037,335	+	yrdA	NIAGMN_15335	0.74	+0.9
3,037,335	+	yrdA	NIAGMN_15335	0.74	+1.6
3,037,335	+	yrdA	NIAGMN_15335	0.74	-0.9
3,037,335	+	yrdA	NIAGMN_15335	0.74	+2.9
3,037,335	+	yrdA	NIAGMN_15335	0.74	+0.7
3,037,336	-	yrdA	NIAGMN_15335	0.74	-0.6
3,037,336	-	yrdA	NIAGMN_15335	0.74	-0.3
3,037,336	-	yrdA	NIAGMN_15335	0.74	-0.3
3,037,412	+	yrdA	NIAGMN_15335	0.87	-2.7
3,037,468	-				-0.2
3,037,481	+				-1.1
3,037,481	+				-1.2
3,037,481	+				+0.6
3,037,481	+				+2.4
3,037,481	+				+0.2
3,037,481	+				-0.8
3,037,481	+				+0.7
3,037,481	+				-0.8
3,037,481	+				-1.7
3,037,481	+				-0.5
3,037,482	-				-0.4
3,037,482	-				+0.5
3,037,482	-				-1.4
3,037,482	-				-0.2
3,037,482	-				-0.2
3,037,482	-				-2.4
3,037,482	-				+0.5
3,037,482	-				-0.1
3,037,482	-				-0.5
3,037,482	-				-0.4
3,037,482	-				+3.1
3,037,485	+				-1.2
3,037,486	-				-0.4
3,037,486	-				-1.5
3,037,486	-				+0.4
3,037,486	-				-0.5
3,037,505	+				+0.6
3,037,505	+				+1.2
3,037,526	+				+0.4
3,037,526	+				-0.4
3,037,526	+				+1.9
3,037,526	+				+0.3
3,037,526	+				+0.3
3,037,526	+				-0.0
3,037,527	-				-1.0
3,037,527	-				+0.7
3,037,548	+				-0.8
3,037,548	+				+0.2
3,037,548	+				+0.2
3,037,548	+				-1.5
3,037,549	-				-1.6
3,037,549	-				-0.0
3,037,549	-				-0.8
3,037,632	-				-3.6
3,037,656	+				+2.7
3,037,656	+				-3.3
3,037,657	-				-4.3