Strain Fitness in Escherichia coli ECRC102 around NIAGMN_10520

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,066,770	+	phnJ	NIAGMN_10510	0.88	-2.0
2,066,770	+	phnJ	NIAGMN_10510	0.88	+0.4
2,066,770	+	phnJ	NIAGMN_10510	0.88	-0.7
2,066,834	-				+1.3
2,066,879	-				-4.6
2,066,891	+				-0.6
2,066,892	-				+1.5
2,066,892	-				+0.6
2,066,928	-				+0.7
2,066,947	+	phnK	NIAGMN_10515	0.11	+1.2
2,066,947	+	phnK	NIAGMN_10515	0.11	-0.4
2,066,948	-	phnK	NIAGMN_10515	0.11	-2.4
2,066,948	-	phnK	NIAGMN_10515	0.11	-0.1
2,067,054	+	phnK	NIAGMN_10515	0.25	+1.6
2,067,124	+	phnK	NIAGMN_10515	0.34	-0.3
2,067,124	+	phnK	NIAGMN_10515	0.34	+0.7
2,067,125	-	phnK	NIAGMN_10515	0.34	+0.7
2,067,225	-	phnK	NIAGMN_10515	0.47	-0.9
2,067,585	+				-0.2
2,067,585	+				-1.1
2,067,585	+				-2.1
2,067,586	-				+0.2
2,067,586	-				+3.9
2,067,586	-				-0.4
2,067,587	+				+2.2
2,067,587	+				+0.2
2,067,587	+				+0.1
2,067,587	+				-0.1
2,067,587	+				+2.0
2,067,587	+				-1.7
2,067,587	+				+0.1
2,067,587	+				-0.2
2,067,588	-				-0.4
2,067,588	-				+0.5
2,067,588	-				+2.7
2,067,740	-				+1.7
2,067,897	-	phnL	NIAGMN_10520	0.24	-2.3
2,067,906	-	phnL	NIAGMN_10520	0.25	-0.5
2,067,906	-	phnL	NIAGMN_10520	0.25	-1.8
2,067,906	-	phnL	NIAGMN_10520	0.25	-0.3
2,067,906	-	phnL	NIAGMN_10520	0.25	+0.5
2,067,906	-	phnL	NIAGMN_10520	0.25	-2.5
2,067,954	+	phnL	NIAGMN_10520	0.32	-0.3
2,068,063	-	phnL	NIAGMN_10520	0.48	+0.1
2,068,063	-	phnL	NIAGMN_10520	0.48	-0.4
2,068,063	-	phnL	NIAGMN_10520	0.48	-1.0
2,068,063	-	phnL	NIAGMN_10520	0.48	-0.9
2,068,063	-	phnL	NIAGMN_10520	0.48	-1.7
2,068,063	-	phnL	NIAGMN_10520	0.48	-0.3
2,068,065	+	phnL	NIAGMN_10520	0.49	+0.5
2,068,066	-	phnL	NIAGMN_10520	0.49	-0.7
2,068,066	-	phnL	NIAGMN_10520	0.49	+0.1
2,068,066	-	phnL	NIAGMN_10520	0.49	-2.3
2,068,261	+	phnL	NIAGMN_10520	0.77	+2.9
2,068,261	+	phnL	NIAGMN_10520	0.77	-1.1
2,068,261	+	phnL	NIAGMN_10520	0.77	+0.3
2,068,262	-	phnL	NIAGMN_10520	0.78	+2.0
2,068,296	+	phnL	NIAGMN_10520	0.83	-1.8
2,068,366	-				+0.3
2,068,369	+				+0.3
2,068,369	+				-2.1
2,068,369	+				-0.9
2,068,369	+				-3.0
2,068,369	+				-3.3
2,068,369	+				+1.3
2,068,370	-				+0.6
2,068,370	-				-0.9
2,068,370	-				+0.5
2,068,422	+				-0.2
2,068,422	+				-2.8
2,068,575	+	phnM	NIAGMN_10525	0.14	+1.5
2,068,575	+	phnM	NIAGMN_10525	0.14	-2.2
2,068,576	-	phnM	NIAGMN_10525	0.15	-0.5
2,068,576	-	phnM	NIAGMN_10525	0.15	+1.1
2,068,686	-	phnM	NIAGMN_10525	0.24	-1.3
2,068,834	-	phnM	NIAGMN_10525	0.37	+0.8
2,068,942	+	phnM	NIAGMN_10525	0.47	-2.9
2,068,942	+	phnM	NIAGMN_10525	0.47	-1.4
2,068,943	-	phnM	NIAGMN_10525	0.47	-1.2
2,068,943	-	phnM	NIAGMN_10525	0.47	+0.2
2,068,952	-	phnM	NIAGMN_10525	0.48	-0.5
2,068,966	+	phnM	NIAGMN_10525	0.49	+1.0
2,068,967	-	phnM	NIAGMN_10525	0.49	+0.7
2,068,996	+	phnM	NIAGMN_10525	0.51	-1.8
2,068,997	-	phnM	NIAGMN_10525	0.52	+0.3
2,068,997	-	phnM	NIAGMN_10525	0.52	-0.4
2,069,230	-	phnM	NIAGMN_10525	0.72	-3.3
2,069,315	-	phnM	NIAGMN_10525	0.80	+0.7
2,069,315	-	phnM	NIAGMN_10525	0.80	-0.3
2,069,317	+	phnM	NIAGMN_10525	0.80	+0.1
2,069,318	-	phnM	NIAGMN_10525	0.80	+1.1
2,069,318	-	phnM	NIAGMN_10525	0.80	-0.2
2,069,376	+	phnM	NIAGMN_10525	0.85	-0.3