Strain Fitness in Escherichia coli ECRC102 around NIAGMN_09780

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,926,221	-	pmbA	NIAGMN_09775	0.39	+1.0
1,926,227	-	pmbA	NIAGMN_09775	0.40	-1.0
1,926,227	-	pmbA	NIAGMN_09775	0.40	-0.5
1,926,352	+	pmbA	NIAGMN_09775	0.49	-1.8
1,926,461	+	pmbA	NIAGMN_09775	0.57	-1.6
1,926,461	+	pmbA	NIAGMN_09775	0.57	-0.7
1,926,462	-	pmbA	NIAGMN_09775	0.57	+0.6
1,926,462	-	pmbA	NIAGMN_09775	0.57	-0.3
1,926,462	-	pmbA	NIAGMN_09775	0.57	-1.1
1,926,540	+	pmbA	NIAGMN_09775	0.63	+0.3
1,926,541	-	pmbA	NIAGMN_09775	0.63	-1.3
1,926,568	+	pmbA	NIAGMN_09775	0.65	+0.7
1,926,734	-	pmbA	NIAGMN_09775	0.77	+2.4
1,926,745	+	pmbA	NIAGMN_09775	0.78	-2.7
1,926,809	-	pmbA	NIAGMN_09775	0.83	-1.0
1,926,885	+	pmbA	NIAGMN_09775	0.89	-1.1
1,926,885	+	pmbA	NIAGMN_09775	0.89	+0.8
1,926,896	+	pmbA	NIAGMN_09775	0.89	-1.4
1,926,897	-	pmbA	NIAGMN_09775	0.89	-1.6
1,926,897	-	pmbA	NIAGMN_09775	0.89	-1.2
1,926,897	-	pmbA	NIAGMN_09775	0.89	-1.3
1,926,897	-	pmbA	NIAGMN_09775	0.89	-0.2
1,927,019	+				-0.4
1,927,020	-				-2.1
1,927,039	+				-0.1
1,927,039	+				-2.1
1,927,040	-				+0.7
1,927,040	-				-1.0
1,927,040	-				+2.3
1,927,044	+				-0.4
1,927,094	+				+0.5
1,927,094	+				-0.1
1,927,094	+				+2.8
1,927,095	-				-0.2
1,927,108	-				-2.9
1,927,108	-				-1.8
1,927,138	+				+0.1
1,927,138	+				+0.1
1,927,138	+				+0.7
1,927,138	+				+0.7
1,927,138	+				-1.3
1,927,138	+				-1.2
1,927,139	-				-0.2
1,927,139	-				-0.6
1,927,139	-				-1.7
1,927,139	-				-0.8
1,927,139	-				-1.4
1,927,139	-				+0.3
1,927,255	-	yjgA	NIAGMN_09780	0.22	-0.5
1,927,314	+	yjgA	NIAGMN_09780	0.32	+0.6
1,927,354	+	yjgA	NIAGMN_09780	0.40	+0.3
1,927,355	-	yjgA	NIAGMN_09780	0.40	-0.5
1,927,357	+	yjgA	NIAGMN_09780	0.40	-1.1
1,927,357	+	yjgA	NIAGMN_09780	0.40	-0.8
1,927,358	-	yjgA	NIAGMN_09780	0.40	+2.1
1,927,419	+	yjgA	NIAGMN_09780	0.51	+1.0
1,927,487	-	yjgA	NIAGMN_09780	0.63	-3.0
1,927,549	-	yjgA	NIAGMN_09780	0.75	+1.5
1,927,586	-	yjgA	NIAGMN_09780	0.81	+2.6
1,927,658	+				+0.2
1,927,659	-				-0.4
1,927,659	-				+1.6
1,927,710	+				+0.2
1,927,711	-				-3.9
1,927,738	-				+1.7
1,927,738	-				+0.2
1,927,738	-				+0.3
1,927,747	-				+0.3
1,927,747	-				-2.7
1,927,775	+				+1.5
1,927,775	+				-0.8
1,927,775	+				+0.5
1,927,775	+				-0.3
1,927,775	+				+0.9
1,927,826	+				+0.5
1,927,827	-				-0.4
1,927,827	-				+1.1
1,927,827	-				+1.0
1,927,886	-				-1.3
1,927,932	+				-1.1
1,927,933	-				+0.8
1,927,965	+				+0.8
1,927,966	-				+0.4
1,927,966	-				+0.2
1,927,966	-				-0.1
1,927,966	-				-1.6
1,927,966	-				-0.7
1,927,966	-				-1.4
1,927,966	-				-1.4
1,928,046	+	mpl	NIAGMN_09790	0.15	+1.7
1,928,087	-	mpl	NIAGMN_09790	0.18	-1.6
1,928,157	+	mpl	NIAGMN_09790	0.23	+2.3
1,928,158	-	mpl	NIAGMN_09790	0.23	+0.1
1,928,240	+	mpl	NIAGMN_09790	0.29	+1.3
1,928,240	+	mpl	NIAGMN_09790	0.29	-1.0
1,928,241	-	mpl	NIAGMN_09790	0.29	+1.4
1,928,241	-	mpl	NIAGMN_09790	0.29	-2.2
1,928,241	-	mpl	NIAGMN_09790	0.29	+2.6
1,928,242	+	mpl	NIAGMN_09790	0.29	-1.0
1,928,243	-	mpl	NIAGMN_09790	0.29	-0.8
1,928,243	-	mpl	NIAGMN_09790	0.29	+2.8
1,928,243	-	mpl	NIAGMN_09790	0.29	+2.4
1,928,379	+	mpl	NIAGMN_09790	0.39	+1.1
1,928,379	+	mpl	NIAGMN_09790	0.39	+2.0
1,928,380	-	mpl	NIAGMN_09790	0.39	+0.6
1,928,380	-	mpl	NIAGMN_09790	0.39	-0.1
1,928,380	-	mpl	NIAGMN_09790	0.39	+0.7
1,928,382	+	mpl	NIAGMN_09790	0.39	-0.5
1,928,383	-	mpl	NIAGMN_09790	0.39	+0.9
1,928,383	-	mpl	NIAGMN_09790	0.39	-0.2
1,928,568	+	mpl	NIAGMN_09790	0.53	-0.7
1,928,569	-	mpl	NIAGMN_09790	0.53	+0.7
1,928,569	-	mpl	NIAGMN_09790	0.53	-1.1
1,928,571	+	mpl	NIAGMN_09790	0.53	-0.7
1,928,571	+	mpl	NIAGMN_09790	0.53	-3.1
1,928,572	-	mpl	NIAGMN_09790	0.53	+0.0
1,928,572	-	mpl	NIAGMN_09790	0.53	+0.2
1,928,682	+	mpl	NIAGMN_09790	0.61	+0.2
1,928,682	+	mpl	NIAGMN_09790	0.61	+0.9
1,928,682	+	mpl	NIAGMN_09790	0.61	+2.5