Strain Fitness in Escherichia coli ECRC102 around NIAGMN_00515

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
80,719	+	ydgK	NIAGMN_00505	0.61	-0.6
80,721	+	ydgK	NIAGMN_00505	0.61	+0.4
80,814	+	ydgK	NIAGMN_00505	0.82	-1.4
80,953	+				+0.1
80,978	+				-0.1
80,978	+				-0.4
81,128	-	rsxA	NIAGMN_00510	0.27	-1.7
81,169	+	rsxA	NIAGMN_00510	0.34	-1.4
81,200	-	rsxA	NIAGMN_00510	0.40	+1.9
81,200	-	rsxA	NIAGMN_00510	0.40	+0.4
81,295	+	rsxA	NIAGMN_00510	0.56	+0.2
81,337	+	rsxA	NIAGMN_00510	0.63	+1.5
81,475	+	rsxA	NIAGMN_00510	0.87	-1.7
81,490	-	rsxA	NIAGMN_00510	0.90	-1.1
81,505	+				+1.4
81,505	+				-1.4
81,505	+				-2.8
81,520	+				+1.4
81,548	+				-1.0
81,558	+				+0.4
81,969	+	rsxB	NIAGMN_00515	0.72	-1.4
81,969	+	rsxB	NIAGMN_00515	0.72	-1.2
82,126	+				+1.7
82,126	+				-0.3
82,213	+				-1.7
82,297	+				-1.5
82,437	+	rsxC	NIAGMN_00520	0.14	+2.4
82,524	+	rsxC	NIAGMN_00520	0.17	-1.3
82,652	+	rsxC	NIAGMN_00520	0.23	+0.1
82,765	+	rsxC	NIAGMN_00520	0.28	-0.7
82,825	+	rsxC	NIAGMN_00520	0.30	-0.1
82,872	+	rsxC	NIAGMN_00520	0.32	+0.3
82,958	+	rsxC	NIAGMN_00520	0.36	+2.0
82,958	+	rsxC	NIAGMN_00520	0.36	-1.8
83,010	+	rsxC	NIAGMN_00520	0.38	-1.4