Strain Fitness in Escherichia coli ECRC101 around MCAODC_12340

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,445,593	+				-1.3
2,445,594	-				-1.0
2,445,594	-				-1.2
2,445,631	+				-1.6
2,445,631	+				-1.5
2,445,631	+				-3.2
2,445,632	-				-3.9
2,445,656	-				-1.8
2,445,760	+				-2.1
2,445,760	+				-0.8
2,445,760	+				-0.5
2,445,761	-				-0.4
2,445,762	+				-1.1
2,445,763	-				-3.6
2,445,763	-				-0.9
2,445,763	-				+1.1
2,445,800	-				-2.2
2,445,800	-				-0.3
2,445,824	+				-0.9
2,445,854	+				+0.3
2,445,855	-				+0.8
2,445,896	+				+0.0
2,445,896	+				+0.2
2,445,938	-				+0.9
2,445,941	+				+0.2
2,445,942	-				-0.4
2,445,951	+				+1.1
2,445,952	-				-0.8
2,446,045	+	purN	MCAODC_12335	0.15	-1.6
2,446,059	+	purN	MCAODC_12335	0.17	-0.4
2,446,109	-	purN	MCAODC_12335	0.25	-3.0
2,446,109	-	purN	MCAODC_12335	0.25	-2.6
2,446,121	+	purN	MCAODC_12335	0.27	-0.4
2,446,140	-	purN	MCAODC_12335	0.30	-0.5
2,446,144	+	purN	MCAODC_12335	0.30	+0.6
2,446,145	-	purN	MCAODC_12335	0.31	-2.5
2,446,189	+	purN	MCAODC_12335	0.37	-3.0
2,446,189	+	purN	MCAODC_12335	0.37	+0.7
2,446,190	-	purN	MCAODC_12335	0.38	-0.7
2,446,190	-	purN	MCAODC_12335	0.38	-3.2
2,446,236	-	purN	MCAODC_12335	0.45	+0.0
2,446,236	-	purN	MCAODC_12335	0.45	-3.3
2,446,246	-	purN	MCAODC_12335	0.46	-1.1
2,446,324	+	purN	MCAODC_12335	0.59	+0.9
2,446,324	+	purN	MCAODC_12335	0.59	+0.4
2,446,325	-	purN	MCAODC_12335	0.59	-1.6
2,446,356	+	purN	MCAODC_12335	0.64	-3.1
2,446,356	+	purN	MCAODC_12335	0.64	+0.5
2,446,356	+	purN	MCAODC_12335	0.64	+0.6
2,446,356	+	purN	MCAODC_12335	0.64	-0.5
2,446,356	+	purN	MCAODC_12335	0.64	-0.6
2,446,356	+	purN	MCAODC_12335	0.64	-0.7
2,446,356	+	purN	MCAODC_12335	0.64	-0.4
2,446,356	+	purN	MCAODC_12335	0.64	+0.5
2,446,357	-	purN	MCAODC_12335	0.64	+1.5
2,446,357	-	purN	MCAODC_12335	0.64	-2.9
2,446,357	-	purN	MCAODC_12335	0.64	-4.0
2,446,357	-	purN	MCAODC_12335	0.64	-0.6
2,446,357	-	purN	MCAODC_12335	0.64	-3.7
2,446,357	-	purN	MCAODC_12335	0.64	-0.3
2,446,357	-	purN	MCAODC_12335	0.64	-0.9
2,446,357	-	purN	MCAODC_12335	0.64	-4.1
2,446,357	-	purN	MCAODC_12335	0.64	-0.2
2,446,357	-	purN	MCAODC_12335	0.64	+0.1
2,446,357	-	purN	MCAODC_12335	0.64	-1.1
2,446,357	-	purN	MCAODC_12335	0.64	-0.1
2,446,389	+	purN	MCAODC_12335	0.69	-2.0
2,446,390	-	purN	MCAODC_12335	0.69	-0.9
2,446,390	-	purN	MCAODC_12335	0.69	-1.3
2,446,426	+	purN	MCAODC_12335	0.74	-0.4
2,446,426	+	purN	MCAODC_12335	0.74	-3.8
2,446,426	+	purN	MCAODC_12335	0.74	-0.7
2,446,427	-	purN	MCAODC_12335	0.75	+0.2
2,446,427	-	purN	MCAODC_12335	0.75	-2.4
2,446,537	+				-2.4
2,446,553	-				-0.2
2,446,570	+				-0.5
2,446,570	+				-1.9
2,446,571	-				-0.8
2,446,571	-				-0.2
2,446,582	+				-3.6
2,446,583	-				-0.3
2,446,583	-				-1.3
2,446,589	+				-1.9
2,446,590	-				-1.8
2,446,981	-	purM	MCAODC_12340	0.38	-1.7
2,447,166	-	purM	MCAODC_12340	0.56	-2.7
2,447,166	-	purM	MCAODC_12340	0.56	-1.9
2,447,180	+	purM	MCAODC_12340	0.57	-0.1
2,447,180	+	purM	MCAODC_12340	0.57	-3.4
2,447,181	-	purM	MCAODC_12340	0.57	-2.6
2,447,181	-	purM	MCAODC_12340	0.57	-4.0
2,447,181	-	purM	MCAODC_12340	0.57	-0.4
2,447,181	-	purM	MCAODC_12340	0.57	-2.9
2,447,303	+	purM	MCAODC_12340	0.69	-5.1
2,447,373	+	purM	MCAODC_12340	0.76	-3.7
2,447,374	-	purM	MCAODC_12340	0.76	-1.1
2,447,422	-	purM	MCAODC_12340	0.80	+0.1
2,447,425	+	purM	MCAODC_12340	0.81	-1.5
2,447,425	+	purM	MCAODC_12340	0.81	-1.1
2,447,426	-	purM	MCAODC_12340	0.81	-3.2
2,447,539	+				-1.7
2,447,600	+				-2.1
2,447,600	+				-3.8
2,447,601	-				-2.0
2,447,601	-				-2.1
2,447,604	+				-3.1
2,447,604	+				-2.6
2,447,605	-				-4.0
2,447,605	-				-2.3
2,447,605	-				-4.7
2,447,605	-				-3.0
2,447,605	-				-3.1
2,447,645	+				-3.4
2,447,645	+				-1.9
2,447,645	+				-1.5
2,447,646	-				-1.2
2,447,714	-				-4.2
2,447,714	-				+0.3
2,447,782	-				+0.5
2,447,902	+				+0.0
2,448,070	+	upp	MCAODC_12345	0.19	-2.9
2,448,104	+	upp	MCAODC_12345	0.25	+1.7
2,448,254	-	upp	MCAODC_12345	0.48	-0.4
2,448,254	-	upp	MCAODC_12345	0.48	-0.1
2,448,254	-	upp	MCAODC_12345	0.48	+0.1
2,448,286	+	upp	MCAODC_12345	0.54	-1.2
2,448,287	-	upp	MCAODC_12345	0.54	-1.2
2,448,307	-	upp	MCAODC_12345	0.57	+1.2
2,448,321	+	upp	MCAODC_12345	0.59	-1.6
2,448,367	-	upp	MCAODC_12345	0.67	-2.2
2,448,445	-	upp	MCAODC_12345	0.79	+2.9
2,448,484	+	upp	MCAODC_12345	0.85	-0.2
2,448,485	-	upp	MCAODC_12345	0.85	+0.9
2,448,485	-	upp	MCAODC_12345	0.85	-0.8
2,448,485	-	upp	MCAODC_12345	0.85	+0.3
2,448,523	+				+0.6
2,448,528	+				+0.4
2,448,528	+				-0.1
2,448,587	+				+0.1
2,448,603	+				+1.5