Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS16440

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
92,497	+		A4249_RS00545	0.67	+0.8
92,497	+		A4249_RS00545	0.67	-0.4
92,498	-		A4249_RS00545	0.67	+0.1
92,498	-		A4249_RS00545	0.67	-0.0
92,498	-		A4249_RS00545	0.67	+0.7
92,677	+				-0.6
92,677	+				+0.3
92,677	+				-1.0
92,677	+				-0.6
92,678	-				-0.5
92,786	-				-0.3
92,800	-				-0.5
92,946	+		A4249_RS16435	0.19	-0.3
93,002	-		A4249_RS16435	0.30	+0.1
93,008	+		A4249_RS16435	0.31	+0.8
93,008	+		A4249_RS16435	0.31	+0.2
93,009	-		A4249_RS16435	0.31	+0.7
93,009	-		A4249_RS16435	0.31	+0.2
93,094	+		A4249_RS16435	0.48	-1.2
93,094	+		A4249_RS16435	0.48	+0.0
93,094	+		A4249_RS16435	0.48	-0.0
93,094	+		A4249_RS16435	0.48	-0.7
93,094	+		A4249_RS16435	0.48	-0.5
93,094	+		A4249_RS16435	0.48	-0.9
93,094	+		A4249_RS16435	0.48	-0.7
93,094	+		A4249_RS16435	0.48	-0.2
93,094	+		A4249_RS16435	0.48	-0.2
93,095	-		A4249_RS16435	0.48	+0.5
93,095	-		A4249_RS16435	0.48	-0.8
93,095	-		A4249_RS16435	0.48	+0.8
93,095	-		A4249_RS16435	0.48	+1.1
93,095	-		A4249_RS16435	0.48	-0.2
93,156	+		A4249_RS16435	0.60	-0.9
93,172	+		A4249_RS16435	0.63	-0.5
93,197	-		A4249_RS16435	0.68	-0.4
93,249	+		A4249_RS16435	0.78	-1.2
93,249	+		A4249_RS16435	0.78	-0.0
93,249	+		A4249_RS16435	0.78	+1.1
93,250	-		A4249_RS16435	0.79	+0.1
93,250	-		A4249_RS16435	0.79	-0.4
93,282	+		A4249_RS16435	0.85	+0.8
93,282	+		A4249_RS16435	0.85	-0.1
93,282	+		A4249_RS16435	0.85	-0.6
93,282	+		A4249_RS16435	0.85	-0.2
93,283	-		A4249_RS16435	0.85	-0.7
93,283	-		A4249_RS16435	0.85	-0.8
93,283	-		A4249_RS16435	0.85	-0.2
93,283	-		A4249_RS16435	0.85	-0.1
93,345	-				+0.3
93,345	-				-0.1
93,407	-				-1.2
93,407	-				+0.4
93,430	+		A4249_RS16440	0.12	+0.9
93,430	+		A4249_RS16440	0.12	+0.2
93,446	+		A4249_RS16440	0.15	-0.3
93,447	-		A4249_RS16440	0.15	+0.3
93,457	-		A4249_RS16440	0.16	+0.3
93,505	+		A4249_RS16440	0.24	-0.2
93,506	-		A4249_RS16440	0.24	+0.4
93,506	-		A4249_RS16440	0.24	+1.0
93,526	+		A4249_RS16440	0.27	-0.6
93,526	+		A4249_RS16440	0.27	-0.1
93,527	-		A4249_RS16440	0.27	-0.2
93,617	+		A4249_RS16440	0.42	+0.2
93,618	-		A4249_RS16440	0.42	-0.9
93,618	-		A4249_RS16440	0.42	-0.8
93,622	-		A4249_RS16440	0.43	-0.6
93,622	-		A4249_RS16440	0.43	-0.1
93,677	-		A4249_RS16440	0.51	-1.3
93,678	+		A4249_RS16440	0.52	+0.4
93,682	+		A4249_RS16440	0.52	-0.6
93,730	+		A4249_RS16440	0.60	+0.7
93,730	+		A4249_RS16440	0.60	-0.8
93,730	+		A4249_RS16440	0.60	+0.4
93,731	-		A4249_RS16440	0.60	-0.8
93,738	+		A4249_RS16440	0.61	-0.5
93,738	+		A4249_RS16440	0.61	-0.2
93,738	+		A4249_RS16440	0.61	-0.4
93,739	-		A4249_RS16440	0.61	-0.8
93,739	-		A4249_RS16440	0.61	+0.8
93,739	-		A4249_RS16440	0.61	+0.7
93,739	-		A4249_RS16440	0.61	+0.4
93,741	+		A4249_RS16440	0.62	-0.3
93,752	+		A4249_RS16440	0.63	+0.1
93,752	+		A4249_RS16440	0.63	-0.7
93,753	-		A4249_RS16440	0.63	+0.9
93,753	-		A4249_RS16440	0.63	+0.4
93,753	-		A4249_RS16440	0.63	+0.4
93,753	-		A4249_RS16440	0.63	+0.1
93,753	-		A4249_RS16440	0.63	-0.6
93,808	+		A4249_RS16440	0.72	+0.1
93,808	+		A4249_RS16440	0.72	+0.4
93,808	+		A4249_RS16440	0.72	-0.9
93,808	+		A4249_RS16440	0.72	+0.0
93,808	+		A4249_RS16440	0.72	+0.4
93,809	-		A4249_RS16440	0.72	+0.4
93,809	-		A4249_RS16440	0.72	-0.1
93,942	+				+0.7
93,942	+				-1.3
93,942	+				-0.4
93,951	+				-2.7
93,952	-				-0.3
93,952	-				+0.3
93,952	-				-0.2
93,952	-				-0.1
94,025	+				+1.7
94,025	+				+0.1
94,026	-				+0.2
94,026	-				-0.1
94,026	-				-0.7
94,026	-				-0.2
94,092	+				-0.3
94,092	+				+0.3
94,092	+				+0.3
94,092	+				-1.5
94,092	+				+0.1
94,093	-				-0.9
94,093	-				-0.3
94,093	-				-0.4
94,112	-				+0.2
94,138	+				+0.4
94,139	-				+0.5
94,149	-				+0.1
94,149	-				-0.8
94,157	+				-0.1
94,157	+				-0.1
94,158	-				+0.7
94,158	-				+0.1
94,158	-				-1.0
94,208	+				-1.8
94,208	+				-2.0
94,222	+				+0.7
94,222	+				+0.4
94,222	+				+0.9
94,222	+				-0.4
94,222	+				-0.5
94,222	+				+0.7
94,223	-				-0.2
94,223	-				+0.2
94,223	-				+0.5
94,223	-				-0.8
94,223	-				-0.8
94,223	-				-0.2
94,223	-				+0.4
94,249	-				-0.3
94,268	+				-1.6
94,268	+				-0.1
94,268	+				+0.3
94,269	-				-0.2
94,269	-				-1.0
94,269	-				+0.1
94,301	+				+0.6
94,301	+				+0.8
94,301	+				-2.6
94,301	+				-1.1
94,301	+				+0.8
94,302	-				+0.2
94,302	-				+0.3
94,302	-				+0.1
94,306	+				+0.7
94,386	+				+0.1
94,412	+				+0.3
94,420	-				-0.7
94,503	+		A4249_RS00550	0.17	+0.5
94,504	-		A4249_RS00550	0.17	+0.3
94,504	-		A4249_RS00550	0.17	+0.2
94,539	+		A4249_RS00550	0.26	+0.1
94,544	+		A4249_RS00550	0.27	-0.5
94,545	-		A4249_RS00550	0.28	+0.1
94,561	+		A4249_RS00550	0.32	-0.1
94,713	+		A4249_RS00550	0.71	-0.7
94,713	+		A4249_RS00550	0.71	+0.0
94,713	+		A4249_RS00550	0.71	+0.3
94,713	+		A4249_RS00550	0.71	-1.9
94,713	+		A4249_RS00550	0.71	-1.4
94,713	+		A4249_RS00550	0.71	-0.2
94,714	-		A4249_RS00550	0.71	-1.2
94,714	-		A4249_RS00550	0.71	+0.3
94,714	-		A4249_RS00550	0.71	-0.4
94,714	-		A4249_RS00550	0.71	+0.5
94,714	-		A4249_RS00550	0.71	-0.3
94,714	-		A4249_RS00550	0.71	-0.1
94,763	+		A4249_RS00550	0.84	-0.5
94,763	+		A4249_RS00550	0.84	+0.1
94,763	+		A4249_RS00550	0.84	+0.1
94,763	+		A4249_RS00550	0.84	-0.5
94,763	+		A4249_RS00550	0.84	-0.0
94,763	+		A4249_RS00550	0.84	-0.6
94,763	+		A4249_RS00550	0.84	+0.2
94,763	+		A4249_RS00550	0.84	-0.5
94,763	+		A4249_RS00550	0.84	+0.2
94,763	+		A4249_RS00550	0.84	-1.3
94,763	+		A4249_RS00550	0.84	+0.4
94,764	-		A4249_RS00550	0.84	-0.4
94,764	-		A4249_RS00550	0.84	+0.2
94,764	-		A4249_RS00550	0.84	+0.1
94,764	-		A4249_RS00550	0.84	-0.2
94,780	-		A4249_RS00550	0.88	+0.5
94,826	+				+0.1
94,826	+				+0.2
94,826	+				-0.9
94,826	+				+0.3
94,826	+				-0.6
94,826	+				-0.0
94,826	+				-0.2
94,826	+				-0.7
94,826	+				+0.0
94,826	+				+0.0
94,826	+				+0.4
94,826	+				-0.5
94,826	+				-0.3
94,827	-				+0.2
94,827	-				-0.8
94,827	-				-0.8
94,827	-				+0.4
94,827	-				-0.1
94,827	-				+0.1
94,827	-				-0.2
94,827	-				-0.2
94,827	-				-0.5
94,827	-				-0.1
94,839	+				-0.4
94,840	-				-0.1
94,840	-				-0.8
94,855	+				-0.1
94,856	-				+0.1
94,856	-				+0.0
94,856	-				+0.0
94,900	-				+0.5
94,948	+				-0.2
94,948	+				+0.4
94,948	+				+1.3
94,948	+				+0.2
94,948	+				-1.0
94,948	+				+1.2
94,948	+				-0.1
94,948	+				+0.6
94,948	+				-0.4
94,948	+				+0.5
94,949	-				-0.3
94,949	-				+0.8
94,949	-				-0.7
94,949	-				+0.1
94,949	-				-0.7
94,949	-				-0.5
94,949	-				+0.1
94,949	-				+0.7
94,949	-				+0.8
94,949	-				-1.0
94,949	-				+0.1
94,951	+				+0.2
94,951	+				-0.3
94,951	+				+0.4
94,951	+				-0.2
94,951	+				-0.2
94,951	+				-0.7
94,951	+				+0.1
94,951	+				+1.4
94,952	-				-0.3
94,952	-				+0.3
94,952	-				+0.0
94,952	-				-0.5
94,952	-				+1.1
94,958	+				+0.9