Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15545

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
3,146,699	+		A4249_RS15540	0.60	-3.4
3,146,699	+		A4249_RS15540	0.60	+1.0
3,146,699	+		A4249_RS15540	0.60	+0.5
3,146,699	+		A4249_RS15540	0.60	+0.6
3,146,699	+		A4249_RS15540	0.60	+0.3
3,146,700	-		A4249_RS15540	0.61	-0.0
3,146,700	-		A4249_RS15540	0.61	+0.1
3,146,700	-		A4249_RS15540	0.61	+0.1
3,146,700	-		A4249_RS15540	0.61	-0.3
3,146,701	+		A4249_RS15540	0.61	+0.1
3,146,701	+		A4249_RS15540	0.61	-0.3
3,146,702	-		A4249_RS15540	0.61	-0.6
3,146,702	-		A4249_RS15540	0.61	+0.2
3,146,702	-		A4249_RS15540	0.61	-1.2
3,147,177	+				-0.9
3,147,177	+				-0.3
3,147,177	+				-0.3
3,147,177	+				+0.6
3,147,178	-				+0.1
3,147,181	-				+1.5
3,147,181	-				-0.3
3,147,181	-				-0.0
3,147,181	-				-0.6
3,147,181	-				+0.8
3,147,303	+				+0.5
3,147,315	+				+0.6
3,147,316	-				+0.8
3,147,316	-				-0.7
3,147,316	-				+0.7
3,147,316	-				-0.5
3,147,316	-				-0.4
3,147,316	-				-1.5
3,147,317	+				-0.1
3,147,317	+				-0.5
3,147,330	+				+0.4
3,147,400	+				+0.4
3,147,400	+				+0.5
3,147,400	+				+0.0
3,147,400	+				+0.1
3,147,402	+				-1.2
3,147,402	+				+0.3
3,147,402	+				-0.1
3,147,402	+				-0.3
3,147,402	+				+0.0
3,147,403	-				-0.7
3,147,403	-				-0.6
3,147,403	-				-0.6
3,147,403	-				-0.8
3,147,417	+				-0.4
3,147,427	+				+1.0
3,147,427	+				-0.9
3,147,431	+				+0.2
3,147,432	-				-1.7
3,147,469	+				-1.5
3,147,470	-				+0.3
3,147,505	+				-1.3
3,147,505	+				+0.2
3,147,505	+				-0.2
3,147,506	-				+0.9
3,147,506	-				-1.0
3,147,506	-				+0.1
3,147,522	+				+1.5
3,147,522	+				+0.0
3,147,522	+				-0.6
3,147,522	+				-0.3
3,147,522	+				+0.2
3,147,522	+				-0.0
3,147,522	+				-0.1
3,147,522	+				+0.1
3,147,522	+				-0.0
3,147,522	+				+0.4
3,147,523	-				+0.4
3,147,523	-				-0.1
3,147,523	-				-0.9
3,147,523	-				-0.9
3,147,523	-				+0.2
3,147,523	-				+1.1
3,147,523	-				-0.7
3,147,526	+				-0.7
3,147,526	+				-0.4
3,147,527	-				-0.1
3,147,527	-				+0.3
3,147,527	-				-0.2
3,147,527	-				-0.2
3,147,527	-				-0.5
3,147,527	-				+0.9
3,147,527	-				+0.6
3,147,527	-				-1.7
3,147,527	-				-1.0
3,147,544	+				+0.3
3,147,547	+				-0.7
3,147,547	+				-0.7
3,147,548	-				-0.0
3,147,548	-				+0.1
3,147,550	+				-0.2
3,147,551	-				+0.2
3,147,551	-				-0.4
3,147,551	-				+0.4
3,147,551	-				-1.0
3,147,551	-				+0.2
3,147,639	+				+0.1
3,147,640	-				-0.4
3,147,640	-				-0.1
3,147,707	+		A4249_RS15545	0.15	-0.7
3,147,707	+		A4249_RS15545	0.15	-0.2
3,147,707	+		A4249_RS15545	0.15	-0.9
3,147,707	+		A4249_RS15545	0.15	-0.5
3,147,707	+		A4249_RS15545	0.15	-0.1
3,147,707	+		A4249_RS15545	0.15	-0.2
3,147,707	+		A4249_RS15545	0.15	+0.2
3,147,707	+		A4249_RS15545	0.15	-0.4
3,147,708	-		A4249_RS15545	0.16	+0.4
3,147,708	-		A4249_RS15545	0.16	+0.4
3,147,708	-		A4249_RS15545	0.16	-0.4
3,147,708	-		A4249_RS15545	0.16	+0.1
3,147,708	-		A4249_RS15545	0.16	-1.0
3,147,708	-		A4249_RS15545	0.16	+0.4
3,147,708	-		A4249_RS15545	0.16	+2.3
3,147,785	+		A4249_RS15545	0.27	-0.3
3,147,786	-		A4249_RS15545	0.27	-0.1
3,147,827	+		A4249_RS15545	0.33	-0.1
3,147,934	-		A4249_RS15545	0.49	-0.9
3,147,934	-		A4249_RS15545	0.49	+0.3
3,147,944	+		A4249_RS15545	0.50	-0.9
3,147,945	-		A4249_RS15545	0.51	+0.1
3,147,954	-		A4249_RS15545	0.52	+0.0
3,147,954	-		A4249_RS15545	0.52	+0.4
3,148,010	+		A4249_RS15545	0.60	-0.6
3,148,010	+		A4249_RS15545	0.60	+0.5
3,148,010	+		A4249_RS15545	0.60	-1.3
3,148,011	-		A4249_RS15545	0.60	-0.2
3,148,011	-		A4249_RS15545	0.60	+0.4
3,148,139	+		A4249_RS15545	0.79	+0.3
3,148,139	+		A4249_RS15545	0.79	-0.9
3,148,140	-		A4249_RS15545	0.79	-0.0
3,148,140	-		A4249_RS15545	0.79	-1.3
3,148,205	+		A4249_RS15545	0.89	+0.8
3,148,205	+		A4249_RS15545	0.89	-0.3
3,148,205	+		A4249_RS15545	0.89	-0.9
3,148,205	+		A4249_RS15545	0.89	-1.0
3,148,206	-		A4249_RS15545	0.89	-0.0
3,148,238	+				-0.0
3,148,268	+				-0.6
3,148,268	+				+0.7
3,148,269	-				+0.0
3,148,269	-				+0.8
3,148,282	+				+0.4
3,148,282	+				+1.2
3,148,282	+				-0.9
3,148,282	+				+0.3
3,148,282	+				+0.9
3,148,282	+				-2.9
3,148,282	+				+0.4
3,148,283	-				-0.6
3,148,286	+				+0.7
3,148,286	+				+0.7
3,148,287	-				-0.1
3,148,287	-				+1.4
3,148,287	-				+1.1
3,148,287	-				-0.9
3,148,287	-				+0.1
3,148,324	+				+0.0
3,148,324	+				-0.3
3,148,324	+				+0.1
3,148,324	+				+0.2
3,148,324	+				-0.4
3,148,324	+				-0.5
3,148,324	+				-0.0
3,148,324	+				-0.1
3,148,324	+				-0.1
3,148,324	+				-0.2
3,148,325	-				-0.7
3,148,325	-				+0.7
3,148,325	-				-0.4
3,148,325	-				-0.9
3,148,325	-				-0.6
3,148,325	-				-0.5
3,148,325	-				-0.8
3,148,325	-				+0.5
3,148,325	-				-1.3
3,148,325	-				-1.0
3,148,325	-				+0.2
3,148,325	-				+0.2
3,148,325	-				-0.9
3,148,325	-				-0.0
3,148,325	-				-0.3
3,148,419	+				-0.9
3,148,420	-				+1.5
3,148,487	+				-1.3
3,148,487	+				-1.2
3,148,487	+				-1.1
3,148,487	+				-0.1
3,148,487	+				-0.1
3,148,487	+				-0.2
3,148,487	+				+0.0
3,148,487	+				-1.3
3,148,487	+				-0.2
3,148,487	+				+0.3
3,148,487	+				-0.7
3,148,487	+				+0.2
3,148,488	-				-0.3
3,148,488	-				+0.3
3,148,488	-				+0.4
3,148,488	-				+0.9
3,148,488	-				-0.1
3,148,488	-				-0.3
3,148,488	-				-0.4
3,148,488	-				+0.3
3,148,520	+		A4249_RS15550	0.10	-0.8
3,148,541	+		A4249_RS15550	0.11	-0.3
3,148,541	+		A4249_RS15550	0.11	+0.5
3,148,542	-		A4249_RS15550	0.11	+0.3
3,148,542	-		A4249_RS15550	0.11	+0.6
3,148,542	-		A4249_RS15550	0.11	+0.1
3,148,542	-		A4249_RS15550	0.11	+0.0
3,148,542	-		A4249_RS15550	0.11	-0.7
3,148,542	-		A4249_RS15550	0.11	-0.2
3,148,544	+		A4249_RS15550	0.11	+0.7
3,148,544	+		A4249_RS15550	0.11	-1.3
3,148,544	+		A4249_RS15550	0.11	-0.4
3,148,544	+		A4249_RS15550	0.11	+0.2
3,148,544	+		A4249_RS15550	0.11	-0.8
3,148,544	+		A4249_RS15550	0.11	-0.2
3,148,544	+		A4249_RS15550	0.11	-0.0
3,148,544	+		A4249_RS15550	0.11	+0.2
3,148,544	+		A4249_RS15550	0.11	-0.2
3,148,544	+		A4249_RS15550	0.11	-0.3
3,148,544	+		A4249_RS15550	0.11	+1.4
3,148,545	-		A4249_RS15550	0.11	+0.1
3,148,545	-		A4249_RS15550	0.11	+1.3
3,148,545	-		A4249_RS15550	0.11	-0.1
3,148,545	-		A4249_RS15550	0.11	-0.1
3,148,545	-		A4249_RS15550	0.11	+0.6
3,148,545	-		A4249_RS15550	0.11	-0.1
3,148,545	-		A4249_RS15550	0.11	+0.1
3,148,545	-		A4249_RS15550	0.11	+0.1
3,148,545	-		A4249_RS15550	0.11	-0.3
3,148,545	-		A4249_RS15550	0.11	-1.3
3,148,545	-		A4249_RS15550	0.11	-0.4
3,148,545	-		A4249_RS15550	0.11	-0.8
3,148,546	+		A4249_RS15550	0.11	+0.0
3,148,546	+		A4249_RS15550	0.11	-0.3
3,148,667	+		A4249_RS15550	0.18	-0.3
3,148,667	+		A4249_RS15550	0.18	-0.3
3,148,667	+		A4249_RS15550	0.18	+0.5
3,148,667	+		A4249_RS15550	0.18	+0.5
3,148,667	+		A4249_RS15550	0.18	+0.7
3,148,667	+		A4249_RS15550	0.18	-0.6
3,148,667	+		A4249_RS15550	0.18	+1.1
3,148,668	-		A4249_RS15550	0.18	+0.4
3,148,763	+		A4249_RS15550	0.23	-0.1
3,148,763	+		A4249_RS15550	0.23	-0.3
3,148,763	+		A4249_RS15550	0.23	-0.0
3,148,763	+		A4249_RS15550	0.23	-0.2
3,148,763	+		A4249_RS15550	0.23	-0.4
3,148,763	+		A4249_RS15550	0.23	+0.3
3,148,763	+		A4249_RS15550	0.23	+0.1
3,148,763	+		A4249_RS15550	0.23	-0.4
3,148,763	+		A4249_RS15550	0.23	+0.3
3,148,763	+		A4249_RS15550	0.23	-0.4
3,148,763	+		A4249_RS15550	0.23	-0.5
3,148,763	+		A4249_RS15550	0.23	+0.7
3,148,763	+		A4249_RS15550	0.23	-0.3
3,148,764	-		A4249_RS15550	0.23	+0.4
3,148,764	-		A4249_RS15550	0.23	-1.3
3,148,764	-		A4249_RS15550	0.23	+0.1
3,148,764	-		A4249_RS15550	0.23	-0.2
3,148,764	-		A4249_RS15550	0.23	+0.5
3,148,764	-		A4249_RS15550	0.23	-1.2
3,148,970	+		A4249_RS15550	0.33	-0.3
3,148,970	+		A4249_RS15550	0.33	-0.0
3,148,970	+		A4249_RS15550	0.33	-0.3
3,148,970	+		A4249_RS15550	0.33	+0.2
3,148,971	-		A4249_RS15550	0.33	+0.8
3,148,971	-		A4249_RS15550	0.33	-0.9
3,148,971	-		A4249_RS15550	0.33	+0.5
3,148,971	-		A4249_RS15550	0.33	-0.7
3,148,971	-		A4249_RS15550	0.33	+0.1
3,148,971	-		A4249_RS15550	0.33	-1.3
3,148,971	-		A4249_RS15550	0.33	-0.8
3,148,971	-		A4249_RS15550	0.33	-0.3
3,148,971	-		A4249_RS15550	0.33	-0.3
3,148,971	-		A4249_RS15550	0.33	+0.4
3,148,972	+		A4249_RS15550	0.33	+0.3
3,148,972	+		A4249_RS15550	0.33	-0.0
3,148,972	+		A4249_RS15550	0.33	+0.2
3,148,972	+		A4249_RS15550	0.33	+1.5
3,148,972	+		A4249_RS15550	0.33	+0.7
3,148,973	-		A4249_RS15550	0.34	+1.2
3,148,973	-		A4249_RS15550	0.34	+0.5
3,148,973	-		A4249_RS15550	0.34	-0.5
3,149,246	+		A4249_RS15550	0.48	+0.4