Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14355

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,898,642	-				-0.0
2,898,721	+				-0.5
2,898,722	-				+0.4
2,898,723	+				-0.5
2,898,723	+				-0.1
2,898,723	+				-1.9
2,898,724	-				-0.3
2,898,724	-				+0.5
2,898,724	-				+0.2
2,898,724	-				-0.7
2,898,724	-				+0.0
2,898,724	-				-0.6
2,898,843	+		A4249_RS14350	0.27	-0.7
2,898,843	+		A4249_RS14350	0.27	+0.1
2,898,843	+		A4249_RS14350	0.27	-0.1
2,898,843	+		A4249_RS14350	0.27	-0.1
2,898,843	+		A4249_RS14350	0.27	-1.1
2,898,843	+		A4249_RS14350	0.27	+2.3
2,898,844	-		A4249_RS14350	0.27	+0.8
2,898,844	-		A4249_RS14350	0.27	-0.7
2,898,844	-		A4249_RS14350	0.27	-0.3
2,898,844	-		A4249_RS14350	0.27	-0.4
2,898,844	-		A4249_RS14350	0.27	+0.6
2,898,844	-		A4249_RS14350	0.27	+1.5
2,898,844	-		A4249_RS14350	0.27	+1.0
2,898,897	+		A4249_RS14350	0.36	-0.3
2,898,936	+		A4249_RS14350	0.42	-0.1
2,898,936	+		A4249_RS14350	0.42	-1.5
2,898,937	-		A4249_RS14350	0.42	-0.7
2,898,937	-		A4249_RS14350	0.42	+0.5
2,898,937	-		A4249_RS14350	0.42	+0.1
2,898,996	+		A4249_RS14350	0.52	+0.5
2,898,996	+		A4249_RS14350	0.52	+0.5
2,898,996	+		A4249_RS14350	0.52	+0.5
2,898,996	+		A4249_RS14350	0.52	-0.0
2,898,996	+		A4249_RS14350	0.52	+0.1
2,898,996	+		A4249_RS14350	0.52	+1.1
2,898,997	-		A4249_RS14350	0.53	-0.4
2,898,997	-		A4249_RS14350	0.53	-0.4
2,898,997	-		A4249_RS14350	0.53	-0.2
2,899,093	+		A4249_RS14350	0.69	+0.3
2,899,093	+		A4249_RS14350	0.69	+0.1
2,899,093	+		A4249_RS14350	0.69	+0.7
2,899,093	+		A4249_RS14350	0.69	+1.4
2,899,094	-		A4249_RS14350	0.69	-1.4
2,899,094	-		A4249_RS14350	0.69	+0.6
2,899,094	-		A4249_RS14350	0.69	+0.7
2,899,094	-		A4249_RS14350	0.69	-0.2
2,899,109	+		A4249_RS14350	0.72	-1.3
2,899,109	+		A4249_RS14350	0.72	+0.3
2,899,109	+		A4249_RS14350	0.72	+0.4
2,899,110	-		A4249_RS14350	0.72	-0.3
2,899,110	-		A4249_RS14350	0.72	-1.8
2,899,110	-		A4249_RS14350	0.72	-1.5
2,899,110	-		A4249_RS14350	0.72	+0.6
2,899,110	-		A4249_RS14350	0.72	+0.7
2,899,110	-		A4249_RS14350	0.72	+0.5
2,899,261	+				+0.1
2,899,261	+				-1.3
2,899,262	-				+0.3
2,899,262	-				+0.6
2,899,262	-				+0.5
2,899,264	+				-1.8
2,899,264	+				-0.4
2,899,265	-				-0.7
2,899,265	-				+0.2
2,899,267	-				+0.3
2,899,267	-				-0.3
2,899,298	-				-0.4
2,899,352	+				-0.3
2,899,352	+				-0.1
2,899,353	-				-0.9
2,899,353	-				+0.9
2,899,353	-				+0.4
2,899,353	-				-0.1
2,899,353	-				-0.1
2,899,353	-				-0.2
2,899,392	-				-0.2
2,899,405	+				+0.4
2,899,424	+				+0.4
2,899,424	+				+0.1
2,899,424	+				+0.0
2,899,424	+				-0.6
2,899,425	-				+0.5
2,899,425	-				-0.6
2,899,425	-				-0.5
2,899,500	+				-0.5
2,899,537	+				-0.8
2,899,546	+				+0.3
2,899,547	-				-0.1
2,899,571	+				+0.6
2,899,571	+				+0.4
2,899,571	+				-0.0
2,899,571	+				-0.2
2,899,625	+				-0.4
2,899,625	+				+0.3
2,899,626	-				+0.5
2,899,767	+		A4249_RS14355	0.21	+0.1
2,899,768	-		A4249_RS14355	0.21	-0.6
2,899,768	-		A4249_RS14355	0.21	+0.7
2,899,768	-		A4249_RS14355	0.21	-0.4
2,899,994	+		A4249_RS14355	0.53	-0.6
2,899,994	+		A4249_RS14355	0.53	-0.5
2,899,994	+		A4249_RS14355	0.53	+0.4
2,899,994	+		A4249_RS14355	0.53	+0.3
2,899,994	+		A4249_RS14355	0.53	-0.0
2,899,994	+		A4249_RS14355	0.53	+0.9
2,899,994	+		A4249_RS14355	0.53	+0.3
2,899,994	+		A4249_RS14355	0.53	-0.6
2,899,995	-		A4249_RS14355	0.54	+0.1
2,899,995	-		A4249_RS14355	0.54	+0.6
2,899,995	-		A4249_RS14355	0.54	-0.6
2,900,197	+		A4249_RS14355	0.82	-0.5
2,900,197	+		A4249_RS14355	0.82	+0.1
2,900,197	+		A4249_RS14355	0.82	-0.4
2,900,198	-		A4249_RS14355	0.82	+0.3
2,900,198	-		A4249_RS14355	0.82	-0.6
2,900,198	-		A4249_RS14355	0.82	-0.0
2,900,198	-		A4249_RS14355	0.82	+0.1
2,900,215	+		A4249_RS14355	0.85	-0.4
2,900,215	+		A4249_RS14355	0.85	-1.2
2,900,215	+		A4249_RS14355	0.85	-1.3
2,900,256	-				-1.0
2,900,289	+				-0.1
2,900,290	-				+0.2
2,900,290	-				+0.1
2,900,290	-				+0.6
2,900,290	-				+1.1
2,900,322	-				-0.5
2,900,322	-				-0.5
2,900,350	+				-0.4
2,900,350	+				-0.3
2,900,350	+				+1.1
2,900,350	+				+0.3
2,900,350	+				+0.7
2,900,350	+				-0.5
2,900,350	+				+0.9
2,900,350	+				+0.4
2,900,350	+				-0.4
2,900,350	+				+0.1
2,900,350	+				-0.4
2,900,351	-				-0.3
2,900,351	-				+0.1
2,900,351	-				-0.1
2,900,417	+				-0.5
2,900,417	+				-1.1
2,900,418	-				+0.4
2,900,418	-				+0.8
2,900,418	-				-0.6
2,900,418	-				-0.2
2,900,418	-				-0.6
2,900,418	-				-1.1
2,900,419	+				+0.4
2,900,419	+				-0.3
2,900,419	+				-0.1
2,900,419	+				-0.4
2,900,419	+				+0.4
2,900,419	+				+0.3
2,900,419	+				+0.1
2,900,419	+				+0.0
2,900,419	+				-0.9
2,900,419	+				+0.2
2,900,419	+				+0.0
2,900,419	+				-0.3
2,900,419	+				-0.7
2,900,420	-				-1.2
2,900,420	-				+0.4
2,900,420	-				+0.5
2,900,420	-				-0.3
2,900,420	-				+0.7
2,900,420	-				+0.3
2,900,420	-				+0.3
2,900,420	-				-1.9
2,900,490	-				-0.9
2,900,490	-				+0.6
2,900,552	+				+0.3
2,900,552	+				+0.2
2,900,552	+				-0.1
2,900,553	-				+0.4
2,900,553	-				-1.4
2,900,553	-				-0.1
2,900,553	-				-0.8
2,900,553	-				+0.1
2,900,553	-				-1.7
2,900,652	+		A4249_RS14360	0.27	+0.4
2,900,652	+		A4249_RS14360	0.27	+0.2
2,900,653	-		A4249_RS14360	0.28	+1.0
2,900,860	-		A4249_RS14360	0.76	-0.2
2,900,860	-		A4249_RS14360	0.76	-0.9
2,900,956	-				+0.0
2,901,257	+		A4249_RS14365	0.18	-0.3
2,901,257	+		A4249_RS14365	0.18	+1.4
2,901,257	+		A4249_RS14365	0.18	-0.2
2,901,257	+		A4249_RS14365	0.18	-0.2
2,901,257	+		A4249_RS14365	0.18	+0.6
2,901,257	+		A4249_RS14365	0.18	+0.0
2,901,257	+		A4249_RS14365	0.18	-0.1
2,901,258	-		A4249_RS14365	0.18	+0.3
2,901,258	-		A4249_RS14365	0.18	-0.0
2,901,258	-		A4249_RS14365	0.18	+0.7
2,901,258	-		A4249_RS14365	0.18	-0.0
2,901,258	-		A4249_RS14365	0.18	-0.0
2,901,258	-		A4249_RS14365	0.18	+0.5
2,901,259	+		A4249_RS14365	0.18	+0.0
2,901,259	+		A4249_RS14365	0.18	+0.1
2,901,260	-		A4249_RS14365	0.18	+0.5
2,901,260	-		A4249_RS14365	0.18	+0.0