Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13070

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,628,350	+				-0.1
2,628,350	+				+0.4
2,628,350	+				+0.4
2,628,350	+				-0.3
2,628,350	+				-0.8
2,628,350	+				+0.2
2,628,351	-				+0.8
2,628,351	-				-0.6
2,628,389	+				-0.2
2,628,390	-				+1.1
2,628,399	+				+0.1
2,628,399	+				+0.1
2,628,400	-				-1.0
2,628,441	+				+0.1
2,628,442	-				+0.2
2,628,442	-				-0.8
2,628,516	+		A4249_RS13070	0.11	-0.3
2,628,516	+		A4249_RS13070	0.11	-0.5
2,628,516	+		A4249_RS13070	0.11	+0.5
2,628,516	+		A4249_RS13070	0.11	-1.9
2,628,516	+		A4249_RS13070	0.11	-1.3
2,628,516	+		A4249_RS13070	0.11	-1.6
2,628,516	+		A4249_RS13070	0.11	+0.2
2,628,516	+		A4249_RS13070	0.11	+0.4
2,628,516	+		A4249_RS13070	0.11	-0.2
2,628,516	+		A4249_RS13070	0.11	+0.2
2,628,516	+		A4249_RS13070	0.11	+0.0
2,628,516	+		A4249_RS13070	0.11	-0.3
2,628,516	+		A4249_RS13070	0.11	-0.1
2,628,517	-		A4249_RS13070	0.11	-0.2
2,628,517	-		A4249_RS13070	0.11	+0.5
2,628,517	-		A4249_RS13070	0.11	+0.4
2,628,517	-		A4249_RS13070	0.11	-1.1
2,628,517	-		A4249_RS13070	0.11	-1.0
2,628,517	-		A4249_RS13070	0.11	-1.1
2,628,517	-		A4249_RS13070	0.11	-2.3
2,628,517	-		A4249_RS13070	0.11	-0.6
2,628,517	-		A4249_RS13070	0.11	-2.4
2,628,518	+		A4249_RS13070	0.11	-1.0
2,628,573	+		A4249_RS13070	0.14	-1.0
2,628,575	+		A4249_RS13070	0.15	-1.3
2,628,576	-		A4249_RS13070	0.15	-0.6
2,628,576	-		A4249_RS13070	0.15	+0.4
2,628,576	-		A4249_RS13070	0.15	-1.0
2,628,576	-		A4249_RS13070	0.15	-1.6
2,628,576	-		A4249_RS13070	0.15	+1.7
2,628,666	+		A4249_RS13070	0.21	+0.0
2,628,666	+		A4249_RS13070	0.21	-1.1
2,628,879	+		A4249_RS13070	0.35	-0.7
2,628,879	+		A4249_RS13070	0.35	-0.3
2,628,879	+		A4249_RS13070	0.35	-0.2
2,628,879	+		A4249_RS13070	0.35	-0.3
2,628,879	+		A4249_RS13070	0.35	-0.7
2,628,879	+		A4249_RS13070	0.35	+0.1
2,628,879	+		A4249_RS13070	0.35	-0.5
2,628,879	+		A4249_RS13070	0.35	+1.1
2,628,879	+		A4249_RS13070	0.35	+0.8
2,628,880	-		A4249_RS13070	0.35	+0.4
2,628,880	-		A4249_RS13070	0.35	-1.2
2,628,880	-		A4249_RS13070	0.35	+0.1
2,628,880	-		A4249_RS13070	0.35	-0.2
2,628,880	-		A4249_RS13070	0.35	-0.4
2,628,880	-		A4249_RS13070	0.35	+0.2
2,628,880	-		A4249_RS13070	0.35	+0.0
2,629,026	+		A4249_RS13070	0.45	+0.4
2,629,026	+		A4249_RS13070	0.45	-0.1
2,629,027	-		A4249_RS13070	0.45	-0.0
2,629,027	-		A4249_RS13070	0.45	+0.1
2,629,041	+		A4249_RS13070	0.46	-2.0
2,629,041	+		A4249_RS13070	0.46	+0.1
2,629,041	+		A4249_RS13070	0.46	+0.5
2,629,042	-		A4249_RS13070	0.46	+1.3
2,629,272	+		A4249_RS13070	0.61	+0.2
2,629,273	-		A4249_RS13070	0.61	-1.1
2,629,273	-		A4249_RS13070	0.61	-1.3
2,629,273	-		A4249_RS13070	0.61	-0.7
2,629,317	+		A4249_RS13070	0.64	-1.1
2,629,317	+		A4249_RS13070	0.64	+0.8
2,629,317	+		A4249_RS13070	0.64	-0.9
2,629,317	+		A4249_RS13070	0.64	-0.9
2,629,317	+		A4249_RS13070	0.64	-1.7
2,629,318	-		A4249_RS13070	0.64	+0.2
2,629,318	-		A4249_RS13070	0.64	+2.1
2,629,338	+		A4249_RS13070	0.65	+0.0
2,629,338	+		A4249_RS13070	0.65	-0.9
2,629,338	+		A4249_RS13070	0.65	+0.5
2,629,338	+		A4249_RS13070	0.65	-1.4
2,629,338	+		A4249_RS13070	0.65	+0.5
2,629,339	-		A4249_RS13070	0.65	+0.2
2,629,339	-		A4249_RS13070	0.65	-0.6
2,629,339	-		A4249_RS13070	0.65	-1.0
2,629,339	-		A4249_RS13070	0.65	-1.0
2,629,339	-		A4249_RS13070	0.65	+0.3
2,629,339	-		A4249_RS13070	0.65	+0.4
2,629,339	-		A4249_RS13070	0.65	-0.4
2,629,339	-		A4249_RS13070	0.65	-1.1
2,629,429	-		A4249_RS13070	0.71	-1.8
2,629,572	+		A4249_RS13070	0.81	-1.2
2,629,572	+		A4249_RS13070	0.81	-0.1
2,629,572	+		A4249_RS13070	0.81	-0.4
2,629,572	+		A4249_RS13070	0.81	-0.6
2,629,573	-		A4249_RS13070	0.81	+0.5
2,629,573	-		A4249_RS13070	0.81	+0.7
2,629,602	+		A4249_RS13070	0.83	-1.0
2,629,602	+		A4249_RS13070	0.83	-0.6
2,629,602	+		A4249_RS13070	0.83	-1.0
2,629,603	-		A4249_RS13070	0.83	-1.9
2,629,603	-		A4249_RS13070	0.83	-1.0
2,629,603	-		A4249_RS13070	0.83	+0.2
2,629,914	+				+1.0
2,629,914	+				+0.1
2,629,914	+				-0.0
2,629,915	-				+0.1
2,629,915	-				+0.1
2,629,915	-				-0.8
2,629,915	-				-0.5
2,630,230	+				-0.2
2,630,268	+		A4249_RS13080	0.11	+0.6
2,630,268	+		A4249_RS13080	0.11	+0.1
2,630,269	-		A4249_RS13080	0.11	+0.4
2,630,269	-		A4249_RS13080	0.11	-0.1
2,630,269	-		A4249_RS13080	0.11	-1.6
2,630,269	-		A4249_RS13080	0.11	+1.1
2,630,278	-		A4249_RS13080	0.12	-1.4
2,630,278	-		A4249_RS13080	0.12	+0.0
2,630,387	+		A4249_RS13080	0.27	-0.1
2,630,387	+		A4249_RS13080	0.27	-2.0
2,630,387	+		A4249_RS13080	0.27	-1.1
2,630,387	+		A4249_RS13080	0.27	+0.1
2,630,388	-		A4249_RS13080	0.27	-0.1
2,630,480	+		A4249_RS13080	0.40	-0.1
2,630,673	+		A4249_RS13080	0.65	+0.6
2,630,673	+		A4249_RS13080	0.65	+0.7
2,630,674	-		A4249_RS13080	0.66	-0.5
2,630,674	-		A4249_RS13080	0.66	+0.2
2,630,674	-		A4249_RS13080	0.66	-0.2
2,630,685	-		A4249_RS13080	0.67	+0.5
2,630,685	-		A4249_RS13080	0.67	-1.2