Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11100 and A4249_RS11105 are separated by 91 nucleotides A4249_RS11105 and A4249_RS11110 are separated by 55 nucleotides A4249_RS11110 and A4249_RS11115 are separated by 162 nucleotides
A4249_RS11100: A4249_RS11100 - response regulator, at 2,234,376 to 2,235,971
_RS11100
A4249_RS11105: A4249_RS11105 - 50S ribosomal protein L20, at 2,236,063 to 2,236,416
_RS11105
A4249_RS11110: A4249_RS11110 - 50S ribosomal protein L35, at 2,236,472 to 2,236,669
_RS11110
A4249_RS11115: A4249_RS11115 - MFS transporter, at 2,236,832 to 2,238,136
_RS11115
Position (kb)
2236
2237 Strain fitness (log2 ratio)
-2
-1
0
1 at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.852 kb on + strand at 2235.853 kb on - strand at 2235.853 kb on - strand at 2235.853 kb on - strand at 2235.853 kb on - strand at 2235.853 kb on - strand at 2235.853 kb on - strand at 2235.854 kb on + strand at 2235.854 kb on + strand at 2235.855 kb on - strand at 2236.023 kb on + strand at 2236.023 kb on + strand at 2236.065 kb on - strand at 2236.065 kb on - strand at 2236.480 kb on - strand at 2236.743 kb on - strand at 2236.743 kb on - strand at 2236.743 kb on - strand at 2236.802 kb on - strand at 2236.802 kb on - strand at 2236.802 kb on - strand at 2237.366 kb on + strand, within A4249_RS11115 at 2237.374 kb on - strand, within A4249_RS11115 at 2237.428 kb on + strand, within A4249_RS11115 at 2237.429 kb on - strand, within A4249_RS11115 at 2237.429 kb on - strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.430 kb on + strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.431 kb on - strand, within A4249_RS11115 at 2237.613 kb on + strand, within A4249_RS11115
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 2,235,852 + -0.0 2,235,852 + +0.2 2,235,852 + +0.5 2,235,852 + +0.1 2,235,852 + +0.1 2,235,852 + -0.8 2,235,852 + +0.8 2,235,852 + -0.7 2,235,852 + -0.3 2,235,852 + -0.5 2,235,852 + +0.2 2,235,853 - -1.3 2,235,853 - -1.2 2,235,853 - -0.8 2,235,853 - +0.1 2,235,853 - -0.3 2,235,853 - +0.4 2,235,854 + -0.4 2,235,854 + -0.3 2,235,855 - +0.4 2,236,023 + -1.3 2,236,023 + +1.3 2,236,065 - -0.3 2,236,065 - +0.6 2,236,480 - +0.2 2,236,743 - -0.7 2,236,743 - +1.3 2,236,743 - +0.9 2,236,802 - +0.5 2,236,802 - +1.4 2,236,802 - -0.3 2,237,366 + A4249_RS11115 0.41 -0.2 2,237,374 - A4249_RS11115 0.42 -0.3 2,237,428 + A4249_RS11115 0.46 -0.0 2,237,429 - A4249_RS11115 0.46 +0.7 2,237,429 - A4249_RS11115 0.46 +0.4 2,237,430 + A4249_RS11115 0.46 -0.1 2,237,430 + A4249_RS11115 0.46 -2.7 2,237,430 + A4249_RS11115 0.46 -0.2 2,237,430 + A4249_RS11115 0.46 -0.2 2,237,430 + A4249_RS11115 0.46 +0.2 2,237,430 + A4249_RS11115 0.46 -1.5 2,237,430 + A4249_RS11115 0.46 -0.0 2,237,430 + A4249_RS11115 0.46 -0.2 2,237,430 + A4249_RS11115 0.46 -1.0 2,237,430 + A4249_RS11115 0.46 -0.1 2,237,430 + A4249_RS11115 0.46 +0.5 2,237,430 + A4249_RS11115 0.46 -0.7 2,237,431 - A4249_RS11115 0.46 -0.0 2,237,431 - A4249_RS11115 0.46 +0.9 2,237,431 - A4249_RS11115 0.46 -0.9 2,237,431 - A4249_RS11115 0.46 -2.1 2,237,431 - A4249_RS11115 0.46 -0.2 2,237,431 - A4249_RS11115 0.46 +0.6 2,237,431 - A4249_RS11115 0.46 +0.6 2,237,431 - A4249_RS11115 0.46 +0.2 2,237,431 - A4249_RS11115 0.46 +0.1 2,237,431 - A4249_RS11115 0.46 +0.3 2,237,613 + A4249_RS11115 0.60 +0.1
Or see this region's nucleotide sequence