Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10415

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,093,006	+		A4249_RS10410	0.70	-0.3
2,093,006	+		A4249_RS10410	0.70	+0.3
2,093,007	-		A4249_RS10410	0.70	-0.9
2,093,007	-		A4249_RS10410	0.70	+0.4
2,093,007	-		A4249_RS10410	0.70	+0.0
2,093,007	-		A4249_RS10410	0.70	+0.0
2,093,007	-		A4249_RS10410	0.70	-0.3
2,093,007	-		A4249_RS10410	0.70	-0.2
2,093,007	-		A4249_RS10410	0.70	-0.0
2,093,024	+		A4249_RS10410	0.71	+1.0
2,093,024	+		A4249_RS10410	0.71	-0.4
2,093,093	+		A4249_RS10410	0.74	+0.1
2,093,093	+		A4249_RS10410	0.74	+0.4
2,093,093	+		A4249_RS10410	0.74	-0.0
2,093,093	+		A4249_RS10410	0.74	+0.4
2,093,094	-		A4249_RS10410	0.74	-0.5
2,093,150	+		A4249_RS10410	0.76	+1.5
2,093,150	+		A4249_RS10410	0.76	-0.3
2,093,150	+		A4249_RS10410	0.76	-0.2
2,093,150	+		A4249_RS10410	0.76	-0.1
2,093,150	+		A4249_RS10410	0.76	-0.3
2,093,150	+		A4249_RS10410	0.76	+0.6
2,093,150	+		A4249_RS10410	0.76	-0.7
2,093,150	+		A4249_RS10410	0.76	+0.5
2,093,151	-		A4249_RS10410	0.76	-0.1
2,093,151	-		A4249_RS10410	0.76	+0.2
2,093,151	-		A4249_RS10410	0.76	+0.9
2,093,302	-		A4249_RS10410	0.82	-0.5
2,093,423	+		A4249_RS10410	0.86	-0.1
2,093,423	+		A4249_RS10410	0.86	+1.1
2,093,423	+		A4249_RS10410	0.86	+0.3
2,093,424	-		A4249_RS10410	0.86	+0.2
2,093,424	-		A4249_RS10410	0.86	-0.1
2,093,857	+				-0.3
2,093,857	+				-0.8
2,093,858	-				+0.9
2,093,858	-				+0.5
2,093,858	-				-1.1
2,093,858	-				+0.4
2,093,887	+				-0.1
2,093,887	+				-0.2
2,093,888	-				-1.0
2,093,992	+				+0.5
2,093,992	+				-1.3
2,093,992	+				-0.2
2,093,992	+				+0.5
2,093,992	+				-0.9
2,093,992	+				-0.1
2,093,992	+				+1.7
2,093,993	-				-2.2
2,093,993	-				-0.7
2,093,993	-				-0.9
2,093,993	-				-0.8
2,095,364	+				-0.2
2,095,365	-				+0.4
2,095,365	-				+0.3
2,095,365	-				+0.2
2,095,365	-				-1.7
2,095,522	+		A4249_RS10420	0.38	-0.6
2,095,522	+		A4249_RS10420	0.38	-2.6
2,095,522	+		A4249_RS10420	0.38	-0.5
2,095,522	+		A4249_RS10420	0.38	-0.9
2,095,522	+		A4249_RS10420	0.38	+0.4
2,095,522	+		A4249_RS10420	0.38	+0.2
2,095,522	+		A4249_RS10420	0.38	+0.9
2,095,523	-		A4249_RS10420	0.38	+0.5
2,095,523	-		A4249_RS10420	0.38	+0.1
2,095,523	-		A4249_RS10420	0.38	+0.1
2,095,523	-		A4249_RS10420	0.38	-1.5
2,095,523	-		A4249_RS10420	0.38	+0.3
2,095,523	-		A4249_RS10420	0.38	+0.2
2,095,523	-		A4249_RS10420	0.38	+0.4
2,095,524	+		A4249_RS10420	0.38	-0.2
2,095,524	+		A4249_RS10420	0.38	-0.7
2,095,524	+		A4249_RS10420	0.38	-0.1
2,095,524	+		A4249_RS10420	0.38	-1.4
2,095,524	+		A4249_RS10420	0.38	-1.2
2,095,524	+		A4249_RS10420	0.38	+0.0
2,095,524	+		A4249_RS10420	0.38	+0.1
2,095,524	+		A4249_RS10420	0.38	-0.3
2,095,524	+		A4249_RS10420	0.38	-0.1
2,095,524	+		A4249_RS10420	0.38	-0.2
2,095,524	+		A4249_RS10420	0.38	+0.2
2,095,525	-		A4249_RS10420	0.39	+0.7
2,095,525	-		A4249_RS10420	0.39	-0.1
2,095,525	-		A4249_RS10420	0.39	-1.1
2,095,525	-		A4249_RS10420	0.39	+1.7
2,095,525	-		A4249_RS10420	0.39	-0.3
2,095,525	-		A4249_RS10420	0.39	+0.6
2,095,525	-		A4249_RS10420	0.39	+0.2
2,095,525	-		A4249_RS10420	0.39	-0.1
2,095,525	-		A4249_RS10420	0.39	-0.5
2,095,525	-		A4249_RS10420	0.39	-0.7
2,095,536	+		A4249_RS10420	0.42	-0.5
2,095,536	+		A4249_RS10420	0.42	+0.5
2,095,537	-		A4249_RS10420	0.42	+0.3
2,095,704	+				+0.1
2,095,705	-				-1.6
2,095,705	-				-0.3
2,095,705	-				+0.0
2,095,731	+				+0.1
2,095,731	+				-0.3
2,095,732	-				+0.6
2,095,732	-				-0.3
2,095,907	+		A4249_RS10425	0.24	+0.3
2,095,908	-		A4249_RS10425	0.24	+0.3
2,095,908	-		A4249_RS10425	0.24	-1.0
2,095,908	-		A4249_RS10425	0.24	-0.7
2,095,949	+		A4249_RS10425	0.29	+1.2
2,095,949	+		A4249_RS10425	0.29	-0.6
2,095,949	+		A4249_RS10425	0.29	+0.3
2,095,949	+		A4249_RS10425	0.29	-0.6
2,095,949	+		A4249_RS10425	0.29	+0.3
2,095,949	+		A4249_RS10425	0.29	+0.1
2,095,949	+		A4249_RS10425	0.29	-0.1
2,095,949	+		A4249_RS10425	0.29	-0.3
2,095,949	+		A4249_RS10425	0.29	-0.0
2,095,949	+		A4249_RS10425	0.29	+0.3
2,095,949	+		A4249_RS10425	0.29	-0.4
2,095,950	-		A4249_RS10425	0.29	-0.0
2,095,950	-		A4249_RS10425	0.29	+0.9
2,095,950	-		A4249_RS10425	0.29	+1.7
2,095,950	-		A4249_RS10425	0.29	-0.4
2,095,950	-		A4249_RS10425	0.29	-1.3
2,095,950	-		A4249_RS10425	0.29	-0.4
2,095,950	-		A4249_RS10425	0.29	+0.1
2,095,950	-		A4249_RS10425	0.29	+1.0
2,095,950	-		A4249_RS10425	0.29	-0.5
2,095,950	-		A4249_RS10425	0.29	-0.6
2,095,950	-		A4249_RS10425	0.29	+0.5
2,096,039	+		A4249_RS10425	0.40	-0.3
2,096,039	+		A4249_RS10425	0.40	+1.4
2,096,039	+		A4249_RS10425	0.40	+0.3
2,096,039	+		A4249_RS10425	0.40	+0.1
2,096,039	+		A4249_RS10425	0.40	+0.1
2,096,039	+		A4249_RS10425	0.40	+1.4
2,096,039	+		A4249_RS10425	0.40	+1.2
2,096,039	+		A4249_RS10425	0.40	+0.8
2,096,040	-		A4249_RS10425	0.40	-0.3
2,096,040	-		A4249_RS10425	0.40	-0.1
2,096,040	-		A4249_RS10425	0.40	-0.2
2,096,040	-		A4249_RS10425	0.40	+0.9
2,096,040	-		A4249_RS10425	0.40	-0.7
2,096,040	-		A4249_RS10425	0.40	+1.3
2,096,040	-		A4249_RS10425	0.40	+1.1
2,096,201	+		A4249_RS10425	0.61	+0.9
2,096,201	+		A4249_RS10425	0.61	+1.9
2,096,201	+		A4249_RS10425	0.61	+0.2
2,096,202	-		A4249_RS10425	0.61	+0.2
2,096,202	-		A4249_RS10425	0.61	+0.5
2,096,202	-		A4249_RS10425	0.61	+0.2