Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10285

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,064,040	-				-0.8
2,064,107	-				+0.6
2,064,111	+				-0.8
2,064,111	+				-0.8
2,064,111	+				-0.3
2,064,111	+				-0.1
2,064,111	+				+0.2
2,064,112	-				-0.3
2,064,112	-				-0.1
2,064,112	-				+1.4
2,064,112	-				+1.4
2,064,112	-				-0.3
2,064,118	-				+0.3
2,064,184	-				-0.1
2,064,204	-				+0.2
2,064,279	+		A4249_RS10280	0.17	+0.3
2,064,372	+		A4249_RS10280	0.27	+1.6
2,064,408	+		A4249_RS10280	0.31	-0.0
2,064,408	+		A4249_RS10280	0.31	+0.4
2,064,408	+		A4249_RS10280	0.31	-0.2
2,064,408	+		A4249_RS10280	0.31	+0.3
2,064,409	-		A4249_RS10280	0.31	-0.2
2,064,409	-		A4249_RS10280	0.31	-0.1
2,064,409	-		A4249_RS10280	0.31	-0.2
2,064,409	-		A4249_RS10280	0.31	+0.3
2,064,409	-		A4249_RS10280	0.31	+0.6
2,064,630	+		A4249_RS10280	0.56	+0.5
2,064,630	+		A4249_RS10280	0.56	-0.6
2,064,630	+		A4249_RS10280	0.56	+0.5
2,064,630	+		A4249_RS10280	0.56	-0.0
2,064,630	+		A4249_RS10280	0.56	-0.4
2,064,630	+		A4249_RS10280	0.56	+0.2
2,064,630	+		A4249_RS10280	0.56	-0.5
2,064,630	+		A4249_RS10280	0.56	-0.0
2,064,630	+		A4249_RS10280	0.56	+0.7
2,064,630	+		A4249_RS10280	0.56	-2.0
2,064,631	-		A4249_RS10280	0.56	+0.7
2,064,631	-		A4249_RS10280	0.56	+0.5
2,064,631	-		A4249_RS10280	0.56	+1.2
2,064,631	-		A4249_RS10280	0.56	+0.4
2,064,631	-		A4249_RS10280	0.56	+1.0
2,064,631	-		A4249_RS10280	0.56	-0.3
2,064,810	+		A4249_RS10280	0.76	-0.7
2,064,810	+		A4249_RS10280	0.76	-0.1
2,064,810	+		A4249_RS10280	0.76	+0.6
2,064,810	+		A4249_RS10280	0.76	-0.5
2,065,029	+				+0.0
2,065,030	-				-0.2
2,065,030	-				+0.4
2,065,301	-		A4249_RS10285	0.18	-1.5
2,065,954	+		A4249_RS10285	0.62	-0.2
2,065,954	+		A4249_RS10285	0.62	+1.0
2,065,954	+		A4249_RS10285	0.62	+1.1
2,065,954	+		A4249_RS10285	0.62	+0.6
2,065,954	+		A4249_RS10285	0.62	-0.0
2,065,954	+		A4249_RS10285	0.62	-0.3
2,065,954	+		A4249_RS10285	0.62	+0.8
2,065,954	+		A4249_RS10285	0.62	-0.5
2,065,954	+		A4249_RS10285	0.62	-0.4
2,065,955	-		A4249_RS10285	0.62	-0.2
2,065,955	-		A4249_RS10285	0.62	+1.3
2,065,955	-		A4249_RS10285	0.62	+0.2
2,065,955	-		A4249_RS10285	0.62	-0.6
2,065,955	-		A4249_RS10285	0.62	+0.7
2,065,955	-		A4249_RS10285	0.62	-0.5
2,065,955	-		A4249_RS10285	0.62	+0.0
2,065,955	-		A4249_RS10285	0.62	+0.4
2,065,955	-		A4249_RS10285	0.62	-0.8
2,065,955	-		A4249_RS10285	0.62	-0.4
2,065,955	-		A4249_RS10285	0.62	+0.0
2,065,955	-		A4249_RS10285	0.62	+0.1
2,065,955	-		A4249_RS10285	0.62	+0.0
2,065,955	-		A4249_RS10285	0.62	-0.0
2,065,955	-		A4249_RS10285	0.62	-0.0
2,065,955	-		A4249_RS10285	0.62	+1.1
2,065,956	+		A4249_RS10285	0.62	+0.6
2,065,956	+		A4249_RS10285	0.62	+0.3
2,065,956	+		A4249_RS10285	0.62	+0.2
2,065,956	+		A4249_RS10285	0.62	-0.5
2,065,956	+		A4249_RS10285	0.62	+0.3
2,065,956	+		A4249_RS10285	0.62	-0.6
2,065,957	-		A4249_RS10285	0.62	-0.0
2,065,957	-		A4249_RS10285	0.62	-1.5
2,065,957	-		A4249_RS10285	0.62	-0.1
2,065,957	-		A4249_RS10285	0.62	-0.9
2,065,957	-		A4249_RS10285	0.62	-0.1
2,066,193	+		A4249_RS10285	0.78	-1.7
2,066,193	+		A4249_RS10285	0.78	-2.3
2,066,193	+		A4249_RS10285	0.78	+0.3
2,066,292	+		A4249_RS10285	0.85	-1.0
2,066,293	-		A4249_RS10285	0.85	-0.2
2,066,362	+		A4249_RS10285	0.89	-0.3
2,066,362	+		A4249_RS10285	0.89	+0.0
2,066,362	+		A4249_RS10285	0.89	+1.0
2,066,362	+		A4249_RS10285	0.89	+1.7
2,066,363	-		A4249_RS10285	0.89	+0.1
2,066,364	+		A4249_RS10285	0.89	+1.4
2,066,364	+		A4249_RS10285	0.89	-0.4
2,066,365	-		A4249_RS10285	0.89	+0.9
2,066,365	-		A4249_RS10285	0.89	-0.2
2,066,414	+				-0.4
2,066,509	+				-0.5
2,066,521	+				-0.7
2,066,521	+				-0.6
2,066,521	+				+0.9
2,066,522	-				-0.2
2,066,522	-				+0.4
2,066,522	-				+0.1
2,066,522	-				-0.2
2,066,522	-				-0.9
2,066,522	-				-0.2
2,066,583	+				-0.2
2,066,588	-				+0.4
2,066,632	-				+1.2
2,066,632	-				-0.0
2,067,318	-		A4249_RS10290	0.44	-0.1
2,067,318	-		A4249_RS10290	0.44	+1.9
2,067,318	-		A4249_RS10290	0.44	-0.4
2,067,421	+		A4249_RS10290	0.52	+0.4
2,067,421	+		A4249_RS10290	0.52	+0.8
2,067,421	+		A4249_RS10290	0.52	-0.2
2,067,421	+		A4249_RS10290	0.52	+0.5
2,067,421	+		A4249_RS10290	0.52	+0.3
2,067,422	-		A4249_RS10290	0.52	+1.2
2,067,422	-		A4249_RS10290	0.52	-1.8
2,067,422	-		A4249_RS10290	0.52	-0.1
2,067,422	-		A4249_RS10290	0.52	-1.1
2,067,422	-		A4249_RS10290	0.52	+0.8
2,067,422	-		A4249_RS10290	0.52	+0.8
2,067,422	-		A4249_RS10290	0.52	+0.1
2,067,423	+		A4249_RS10290	0.52	-0.3
2,067,423	+		A4249_RS10290	0.52	+0.1
2,067,423	+		A4249_RS10290	0.52	+1.3
2,067,423	+		A4249_RS10290	0.52	+0.3
2,067,423	+		A4249_RS10290	0.52	+0.7
2,067,424	-		A4249_RS10290	0.52	+0.6
2,067,424	-		A4249_RS10290	0.52	+1.4
2,067,424	-		A4249_RS10290	0.52	-0.1
2,067,424	-		A4249_RS10290	0.52	-0.0
2,067,424	-		A4249_RS10290	0.52	-0.6
2,067,424	-		A4249_RS10290	0.52	-0.6
2,067,424	-		A4249_RS10290	0.52	+1.5
2,067,424	-		A4249_RS10290	0.52	+0.5
2,067,445	+		A4249_RS10290	0.54	+0.7
2,067,446	-		A4249_RS10290	0.54	+0.4
2,067,446	-		A4249_RS10290	0.54	+0.3
2,067,446	-		A4249_RS10290	0.54	+0.7