Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10260

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,059,368	+		A4249_RS10255	0.24	-0.1
2,059,368	+		A4249_RS10255	0.24	-0.2
2,059,368	+		A4249_RS10255	0.24	+1.0
2,059,368	+		A4249_RS10255	0.24	+1.0
2,059,368	+		A4249_RS10255	0.24	-0.3
2,059,369	-		A4249_RS10255	0.24	-0.8
2,059,369	-		A4249_RS10255	0.24	-0.4
2,059,369	-		A4249_RS10255	0.24	-0.0
2,059,369	-		A4249_RS10255	0.24	-0.3
2,059,369	-		A4249_RS10255	0.24	+0.8
2,059,369	-		A4249_RS10255	0.24	+0.3
2,059,369	-		A4249_RS10255	0.24	-0.2
2,059,369	-		A4249_RS10255	0.24	-0.4
2,059,369	-		A4249_RS10255	0.24	+0.6
2,059,369	-		A4249_RS10255	0.24	+0.7
2,059,987	+		A4249_RS10255	0.87	-0.1
2,059,988	-		A4249_RS10255	0.87	-0.4
2,059,992	+		A4249_RS10255	0.87	+0.6
2,059,992	+		A4249_RS10255	0.87	+0.6
2,059,993	-		A4249_RS10255	0.87	+0.5
2,059,993	-		A4249_RS10255	0.87	+0.6
2,060,058	+				+0.7
2,060,058	+				+0.2
2,060,058	+				+0.7
2,060,058	+				-0.6
2,060,058	+				+0.3
2,060,058	+				-0.3
2,060,058	+				+0.6
2,060,058	+				+0.2
2,060,059	-				+0.2
2,060,059	-				+0.0
2,060,059	-				+0.1
2,060,059	-				-0.3
2,060,059	-				-0.4
2,060,059	-				-0.1
2,060,059	-				-0.5
2,060,059	-				-0.3
2,060,100	+				+0.0
2,060,100	+				-0.2
2,060,100	+				+1.6
2,060,100	+				-0.1
2,060,100	+				+0.1
2,060,101	-				+0.1
2,060,101	-				-0.9
2,060,101	-				-0.4
2,060,101	-				-0.3
2,060,101	-				-0.4
2,060,153	+				+1.2
2,060,153	+				+0.0
2,060,153	+				-0.3
2,060,153	+				+0.2
2,060,153	+				-0.6
2,060,153	+				+0.3
2,060,153	+				-0.3
2,060,153	+				+0.5
2,060,154	-				+0.4
2,060,154	-				+0.7
2,060,154	-				-0.5
2,060,154	-				-0.2
2,060,224	+				+0.6
2,060,447	+		A4249_RS10260	0.29	-0.3
2,060,448	-		A4249_RS10260	0.29	-0.9
2,060,448	-		A4249_RS10260	0.29	+0.2
2,060,448	-		A4249_RS10260	0.29	+0.4
2,060,448	-		A4249_RS10260	0.29	-0.4
2,060,461	+		A4249_RS10260	0.31	-0.1
2,060,461	+		A4249_RS10260	0.31	+0.3
2,060,461	+		A4249_RS10260	0.31	-0.2
2,060,461	+		A4249_RS10260	0.31	-0.0
2,060,461	+		A4249_RS10260	0.31	+0.7
2,060,461	+		A4249_RS10260	0.31	-0.2
2,060,461	+		A4249_RS10260	0.31	-0.1
2,060,461	+		A4249_RS10260	0.31	-0.2
2,060,461	+		A4249_RS10260	0.31	-0.1
2,060,461	+		A4249_RS10260	0.31	-0.1
2,060,461	+		A4249_RS10260	0.31	-0.4
2,060,461	+		A4249_RS10260	0.31	-0.8
2,060,461	+		A4249_RS10260	0.31	+0.6
2,060,461	+		A4249_RS10260	0.31	-0.2
2,060,461	+		A4249_RS10260	0.31	-0.9
2,060,462	-		A4249_RS10260	0.31	+0.2
2,060,462	-		A4249_RS10260	0.31	+0.7
2,060,462	-		A4249_RS10260	0.31	+0.1
2,060,462	-		A4249_RS10260	0.31	-0.0
2,060,462	-		A4249_RS10260	0.31	+1.0
2,060,462	-		A4249_RS10260	0.31	+0.3
2,060,462	-		A4249_RS10260	0.31	+0.4
2,060,462	-		A4249_RS10260	0.31	-0.1
2,060,587	+		A4249_RS10260	0.48	+0.2
2,060,587	+		A4249_RS10260	0.48	-0.2
2,060,588	-		A4249_RS10260	0.48	-0.1
2,060,588	-		A4249_RS10260	0.48	-1.0
2,060,588	-		A4249_RS10260	0.48	+1.1
2,060,588	-		A4249_RS10260	0.48	-0.7
2,060,599	+		A4249_RS10260	0.49	-0.7
2,060,599	+		A4249_RS10260	0.49	+0.3
2,060,599	+		A4249_RS10260	0.49	-0.9
2,060,599	+		A4249_RS10260	0.49	-0.9
2,060,600	-		A4249_RS10260	0.49	-0.5
2,060,600	-		A4249_RS10260	0.49	+0.5
2,060,600	-		A4249_RS10260	0.49	-0.4
2,060,600	-		A4249_RS10260	0.49	-0.2
2,060,629	+		A4249_RS10260	0.53	-0.8
2,060,706	-		A4249_RS10260	0.63	+0.1
2,060,839	+		A4249_RS10260	0.81	-0.4
2,060,954	+				+0.0
2,060,954	+				-0.2
2,060,954	+				+0.0
2,060,955	-				-0.8
2,060,955	-				-0.6
2,060,955	-				+0.1
2,061,008	+				+0.5
2,061,008	+				+0.2
2,061,472	+		A4249_RS10265	0.35	+0.2
2,061,472	+		A4249_RS10265	0.35	+0.1
2,061,472	+		A4249_RS10265	0.35	+0.5
2,061,472	+		A4249_RS10265	0.35	+0.2
2,061,472	+		A4249_RS10265	0.35	+1.2
2,061,473	-		A4249_RS10265	0.36	+0.0
2,061,538	+		A4249_RS10265	0.42	+0.0
2,061,538	+		A4249_RS10265	0.42	+0.8
2,061,538	+		A4249_RS10265	0.42	-0.8
2,061,538	+		A4249_RS10265	0.42	+0.8
2,061,538	+		A4249_RS10265	0.42	-0.5
2,061,538	+		A4249_RS10265	0.42	+0.7
2,061,538	+		A4249_RS10265	0.42	-0.0
2,061,538	+		A4249_RS10265	0.42	-1.0
2,061,539	-		A4249_RS10265	0.42	-0.7
2,061,539	-		A4249_RS10265	0.42	-0.1
2,061,539	-		A4249_RS10265	0.42	+0.5
2,061,539	-		A4249_RS10265	0.42	-1.1
2,061,539	-		A4249_RS10265	0.42	-0.3
2,061,539	-		A4249_RS10265	0.42	+0.3
2,061,539	-		A4249_RS10265	0.42	+0.1
2,061,540	+		A4249_RS10265	0.42	+0.2
2,061,540	+		A4249_RS10265	0.42	+0.3
2,061,540	+		A4249_RS10265	0.42	+0.1
2,061,540	+		A4249_RS10265	0.42	-0.1
2,061,540	+		A4249_RS10265	0.42	-0.0
2,061,540	+		A4249_RS10265	0.42	-0.7
2,061,540	+		A4249_RS10265	0.42	+0.1
2,061,540	+		A4249_RS10265	0.42	-0.0
2,061,540	+		A4249_RS10265	0.42	+0.9
2,061,540	+		A4249_RS10265	0.42	-0.1
2,061,540	+		A4249_RS10265	0.42	+0.3
2,061,540	+		A4249_RS10265	0.42	+0.7
2,061,540	+		A4249_RS10265	0.42	+0.7
2,061,540	+		A4249_RS10265	0.42	-0.3
2,061,541	-		A4249_RS10265	0.42	-0.8
2,061,541	-		A4249_RS10265	0.42	+0.3
2,061,541	-		A4249_RS10265	0.42	+1.1
2,061,541	-		A4249_RS10265	0.42	-0.2
2,061,541	-		A4249_RS10265	0.42	-0.6
2,061,541	-		A4249_RS10265	0.42	+0.5
2,061,541	-		A4249_RS10265	0.42	-0.6
2,061,541	-		A4249_RS10265	0.42	-0.2
2,061,898	+		A4249_RS10265	0.78	+1.3
2,061,899	-		A4249_RS10265	0.79	-0.1
2,061,899	-		A4249_RS10265	0.79	+0.0
2,061,944	-		A4249_RS10265	0.83	-0.1
2,061,971	-		A4249_RS10265	0.86	-0.2
2,061,971	-		A4249_RS10265	0.86	-0.3