Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09345

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,869,724	+		A4249_RS09340	0.50	+0.3
1,869,725	-		A4249_RS09340	0.50	-0.5
1,869,725	-		A4249_RS09340	0.50	-2.0
1,869,730	+		A4249_RS09340	0.51	+0.4
1,869,731	-		A4249_RS09340	0.51	+0.6
1,869,731	-		A4249_RS09340	0.51	-0.2
1,869,731	-		A4249_RS09340	0.51	+0.5
1,869,869	+		A4249_RS09340	0.59	+0.6
1,869,870	-		A4249_RS09340	0.60	+0.9
1,869,870	-		A4249_RS09340	0.60	-0.9
1,869,870	-		A4249_RS09340	0.60	-0.3
1,869,870	-		A4249_RS09340	0.60	-0.2
1,869,870	-		A4249_RS09340	0.60	+0.4
1,870,012	+		A4249_RS09340	0.69	+0.7
1,870,012	+		A4249_RS09340	0.69	+0.1
1,870,012	+		A4249_RS09340	0.69	-1.6
1,870,012	+		A4249_RS09340	0.69	-0.0
1,870,012	+		A4249_RS09340	0.69	-0.2
1,870,012	+		A4249_RS09340	0.69	+0.1
1,870,012	+		A4249_RS09340	0.69	+0.1
1,870,012	+		A4249_RS09340	0.69	-0.8
1,870,012	+		A4249_RS09340	0.69	-0.1
1,870,013	-		A4249_RS09340	0.69	+0.1
1,870,013	-		A4249_RS09340	0.69	-0.0
1,870,013	-		A4249_RS09340	0.69	-1.8
1,870,013	-		A4249_RS09340	0.69	-1.1
1,870,013	-		A4249_RS09340	0.69	-0.9
1,870,013	-		A4249_RS09340	0.69	+0.7
1,870,013	-		A4249_RS09340	0.69	+0.1
1,870,013	-		A4249_RS09340	0.69	+1.1
1,870,013	-		A4249_RS09340	0.69	-0.7
1,870,013	-		A4249_RS09340	0.69	-0.1
1,870,013	-		A4249_RS09340	0.69	+0.8
1,870,013	-		A4249_RS09340	0.69	-0.1
1,870,013	-		A4249_RS09340	0.69	-1.3
1,870,013	-		A4249_RS09340	0.69	-0.9
1,870,030	+		A4249_RS09340	0.70	-0.2
1,870,030	+		A4249_RS09340	0.70	+0.2
1,870,030	+		A4249_RS09340	0.70	+0.4
1,870,030	+		A4249_RS09340	0.70	+0.6
1,870,030	+		A4249_RS09340	0.70	-0.6
1,870,030	+		A4249_RS09340	0.70	+0.5
1,870,030	+		A4249_RS09340	0.70	+0.7
1,870,030	+		A4249_RS09340	0.70	-0.4
1,870,030	+		A4249_RS09340	0.70	+0.3
1,870,031	-		A4249_RS09340	0.70	+0.1
1,870,031	-		A4249_RS09340	0.70	-0.0
1,870,031	-		A4249_RS09340	0.70	+0.5
1,870,031	-		A4249_RS09340	0.70	+0.3
1,870,031	-		A4249_RS09340	0.70	+0.1
1,870,031	-		A4249_RS09340	0.70	+0.4
1,870,031	-		A4249_RS09340	0.70	-0.2
1,870,031	-		A4249_RS09340	0.70	+0.3
1,870,031	-		A4249_RS09340	0.70	+0.1
1,870,087	-		A4249_RS09340	0.73	-0.4
1,870,096	+		A4249_RS09340	0.74	+0.4
1,870,096	+		A4249_RS09340	0.74	-0.6
1,870,096	+		A4249_RS09340	0.74	-0.6
1,870,096	+		A4249_RS09340	0.74	-0.5
1,870,096	+		A4249_RS09340	0.74	+0.4
1,870,096	+		A4249_RS09340	0.74	+1.0
1,870,096	+		A4249_RS09340	0.74	+1.7
1,870,096	+		A4249_RS09340	0.74	-0.2
1,870,096	+		A4249_RS09340	0.74	-0.5
1,870,096	+		A4249_RS09340	0.74	+2.0
1,870,096	+		A4249_RS09340	0.74	+1.0
1,870,097	-		A4249_RS09340	0.74	+0.5
1,870,097	-		A4249_RS09340	0.74	+1.2
1,870,097	-		A4249_RS09340	0.74	+0.4
1,870,097	-		A4249_RS09340	0.74	-1.1
1,870,097	-		A4249_RS09340	0.74	+0.5
1,870,097	-		A4249_RS09340	0.74	-0.2
1,870,097	-		A4249_RS09340	0.74	+0.1
1,870,097	-		A4249_RS09340	0.74	+0.5
1,870,258	+		A4249_RS09340	0.84	-1.0
1,870,258	+		A4249_RS09340	0.84	-0.7
1,870,258	+		A4249_RS09340	0.84	-0.3
1,870,258	+		A4249_RS09340	0.84	+0.8
1,870,258	+		A4249_RS09340	0.84	-0.3
1,870,258	+		A4249_RS09340	0.84	+0.9
1,870,258	+		A4249_RS09340	0.84	+1.1
1,870,258	+		A4249_RS09340	0.84	-0.3
1,870,258	+		A4249_RS09340	0.84	+0.0
1,870,258	+		A4249_RS09340	0.84	+0.1
1,870,258	+		A4249_RS09340	0.84	-0.4
1,870,258	+		A4249_RS09340	0.84	-0.2
1,870,258	+		A4249_RS09340	0.84	+0.6
1,870,258	+		A4249_RS09340	0.84	+1.8
1,870,258	+		A4249_RS09340	0.84	+0.8
1,870,258	+		A4249_RS09340	0.84	+1.1
1,870,258	+		A4249_RS09340	0.84	+0.1
1,870,258	+		A4249_RS09340	0.84	+0.5
1,870,259	-		A4249_RS09340	0.84	+0.7
1,870,259	-		A4249_RS09340	0.84	-0.8
1,870,259	-		A4249_RS09340	0.84	+1.1
1,870,259	-		A4249_RS09340	0.84	-0.9
1,870,259	-		A4249_RS09340	0.84	-0.1
1,870,259	-		A4249_RS09340	0.84	+0.4
1,870,259	-		A4249_RS09340	0.84	-0.3
1,870,259	-		A4249_RS09340	0.84	+0.1
1,870,259	-		A4249_RS09340	0.84	+1.2
1,870,259	-		A4249_RS09340	0.84	+0.6
1,870,259	-		A4249_RS09340	0.84	+0.9
1,870,259	-		A4249_RS09340	0.84	-0.5
1,870,259	-		A4249_RS09340	0.84	+1.1
1,870,259	-		A4249_RS09340	0.84	+0.0
1,870,259	-		A4249_RS09340	0.84	+0.4
1,870,259	-		A4249_RS09340	0.84	+0.2
1,870,259	-		A4249_RS09340	0.84	+1.3
1,870,259	-		A4249_RS09340	0.84	+0.8
1,870,259	-		A4249_RS09340	0.84	-0.1
1,870,259	-		A4249_RS09340	0.84	+0.1
1,870,507	-				-0.4
1,870,555	+				-0.4
1,870,555	+				+0.1
1,870,555	+				+0.4
1,870,556	-				-0.6
1,870,556	-				-1.6
1,870,822	+		A4249_RS09345	0.28	+1.3
1,870,822	+		A4249_RS09345	0.28	-0.1
1,870,822	+		A4249_RS09345	0.28	-1.2
1,870,822	+		A4249_RS09345	0.28	-0.2
1,870,823	-		A4249_RS09345	0.28	-0.2
1,870,823	-		A4249_RS09345	0.28	+0.1
1,870,823	-		A4249_RS09345	0.28	+0.3
1,870,823	-		A4249_RS09345	0.28	-1.6
1,870,823	-		A4249_RS09345	0.28	-0.0
1,870,823	-		A4249_RS09345	0.28	-0.1
1,870,933	+		A4249_RS09345	0.40	+0.1
1,870,933	+		A4249_RS09345	0.40	-0.2
1,870,933	+		A4249_RS09345	0.40	-0.4
1,870,933	+		A4249_RS09345	0.40	-0.6
1,870,933	+		A4249_RS09345	0.40	-0.1
1,870,933	+		A4249_RS09345	0.40	+0.8
1,870,933	+		A4249_RS09345	0.40	-1.0
1,870,933	+		A4249_RS09345	0.40	-0.0
1,870,933	+		A4249_RS09345	0.40	-0.4
1,870,933	+		A4249_RS09345	0.40	+0.4
1,870,933	+		A4249_RS09345	0.40	-0.6
1,870,933	+		A4249_RS09345	0.40	+0.5
1,870,934	-		A4249_RS09345	0.40	+0.3
1,870,934	-		A4249_RS09345	0.40	-0.6
1,870,934	-		A4249_RS09345	0.40	-0.4
1,870,934	-		A4249_RS09345	0.40	-0.0
1,870,934	-		A4249_RS09345	0.40	-0.1
1,870,934	-		A4249_RS09345	0.40	-0.2
1,870,934	-		A4249_RS09345	0.40	-0.7
1,870,934	-		A4249_RS09345	0.40	-0.2
1,870,934	-		A4249_RS09345	0.40	+0.7
1,870,934	-		A4249_RS09345	0.40	+1.7
1,870,934	-		A4249_RS09345	0.40	+0.3
1,870,934	-		A4249_RS09345	0.40	-0.3
1,870,934	-		A4249_RS09345	0.40	-1.6
1,870,934	-		A4249_RS09345	0.40	+0.2
1,870,934	-		A4249_RS09345	0.40	-1.4
1,871,056	+		A4249_RS09345	0.53	-0.1
1,871,056	+		A4249_RS09345	0.53	+0.0
1,871,057	-		A4249_RS09345	0.53	+0.4
1,871,057	-		A4249_RS09345	0.53	-0.0
1,871,057	-		A4249_RS09345	0.53	+0.0
1,871,057	-		A4249_RS09345	0.53	-0.1
1,871,068	+		A4249_RS09345	0.55	+0.0
1,871,068	+		A4249_RS09345	0.55	-0.3
1,871,068	+		A4249_RS09345	0.55	-0.1
1,871,069	-		A4249_RS09345	0.55	+0.4
1,871,069	-		A4249_RS09345	0.55	+0.5
1,871,069	-		A4249_RS09345	0.55	-1.1
1,871,069	-		A4249_RS09345	0.55	-0.9
1,871,086	+		A4249_RS09345	0.57	+0.1
1,871,086	+		A4249_RS09345	0.57	+0.6
1,871,086	+		A4249_RS09345	0.57	-0.3
1,871,086	+		A4249_RS09345	0.57	-0.0
1,871,087	-		A4249_RS09345	0.57	+0.3
1,871,087	-		A4249_RS09345	0.57	+0.1
1,871,087	-		A4249_RS09345	0.57	+0.8
1,871,087	-		A4249_RS09345	0.57	-0.4
1,871,350	+		A4249_RS09345	0.85	-0.1
1,871,350	+		A4249_RS09345	0.85	+0.6
1,871,350	+		A4249_RS09345	0.85	-0.0
1,871,351	-		A4249_RS09345	0.85	+0.0
1,871,351	-		A4249_RS09345	0.85	-0.3
1,871,476	+				+0.1
1,871,476	+				-0.3
1,871,476	+				+0.2
1,871,477	-				-0.2
1,871,477	-				-0.1
1,871,477	-				-0.8
1,871,477	-				-0.3
1,871,921	+		A4249_RS09350	0.56	+0.6
1,871,922	-		A4249_RS09350	0.56	+0.0
1,871,922	-		A4249_RS09350	0.56	+0.5
1,871,942	+		A4249_RS09350	0.61	-0.1
1,871,942	+		A4249_RS09350	0.61	-0.7
1,872,026	-		A4249_RS09350	0.81	+0.8
1,872,179	-				+0.4
1,872,179	-				+0.2
1,872,194	+				+0.5
1,872,209	+				+0.2
1,872,209	+				+0.1
1,872,210	-				-0.8
1,872,247	-				-1.0
1,872,247	-				+0.2
1,872,303	+		A4249_RS09355	0.15	+0.4
1,872,303	+		A4249_RS09355	0.15	-0.6
1,872,304	-		A4249_RS09355	0.15	-0.9
1,872,304	-		A4249_RS09355	0.15	-0.2
1,872,304	-		A4249_RS09355	0.15	+0.2
1,872,310	+		A4249_RS09355	0.16	+0.1
1,872,310	+		A4249_RS09355	0.16	-0.1
1,872,311	-		A4249_RS09355	0.17	+0.2
1,872,311	-		A4249_RS09355	0.17	+0.1
1,872,311	-		A4249_RS09355	0.17	+0.6
1,872,311	-		A4249_RS09355	0.17	-1.3
1,872,311	-		A4249_RS09355	0.17	-1.0
1,872,311	-		A4249_RS09355	0.17	-0.9
1,872,311	-		A4249_RS09355	0.17	-1.4
1,872,311	-		A4249_RS09355	0.17	+0.4