Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08215

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,652,128	+				-0.9
1,652,128	+				-0.7
1,652,129	-				-0.1
1,652,185	+				+0.4
1,652,185	+				-0.5
1,652,185	+				-0.5
1,652,186	-				+0.1
1,652,186	-				-0.1
1,652,186	-				+0.7
1,652,236	+				-0.2
1,652,236	+				+0.3
1,652,236	+				-0.2
1,652,236	+				-0.1
1,652,236	+				-0.8
1,652,236	+				+0.2
1,652,236	+				+0.1
1,652,236	+				-0.6
1,652,237	-				-0.6
1,652,237	-				-1.0
1,652,237	-				+0.0
1,652,237	-				-0.7
1,652,237	-				+0.1
1,652,237	-				-1.2
1,652,257	+				-1.9
1,652,257	+				-0.6
1,652,257	+				-0.9
1,652,258	-				-0.0
1,652,258	-				+0.5
1,652,258	-				-0.2
1,652,258	-				+0.1
1,652,258	-				+1.0
1,652,258	-				+0.2
1,652,260	+				+1.5
1,652,260	+				-0.4
1,652,260	+				-0.9
1,652,260	+				-0.4
1,652,260	+				-0.1
1,652,260	+				-0.2
1,652,260	+				-0.1
1,652,260	+				+0.3
1,652,260	+				-0.6
1,652,260	+				-0.0
1,652,260	+				+0.2
1,652,261	-				+0.1
1,652,261	-				-0.5
1,652,261	-				-0.5
1,652,261	-				-0.4
1,652,261	-				-0.1
1,652,261	-				+0.1
1,652,261	-				-0.2
1,652,261	-				+0.0
1,652,261	-				-0.3
1,652,261	-				-0.2
1,652,261	-				+0.0
1,652,350	+		A4249_RS08215	0.12	-0.2
1,652,350	+		A4249_RS08215	0.12	-0.1
1,652,350	+		A4249_RS08215	0.12	-0.1
1,652,350	+		A4249_RS08215	0.12	-0.6
1,652,350	+		A4249_RS08215	0.12	+1.3
1,652,350	+		A4249_RS08215	0.12	-0.3
1,652,350	+		A4249_RS08215	0.12	-0.3
1,652,351	-		A4249_RS08215	0.12	+0.4
1,652,351	-		A4249_RS08215	0.12	-0.2
1,652,351	-		A4249_RS08215	0.12	-0.7
1,652,351	-		A4249_RS08215	0.12	+1.2
1,652,351	-		A4249_RS08215	0.12	+0.2
1,652,351	-		A4249_RS08215	0.12	-0.3
1,652,351	-		A4249_RS08215	0.12	+0.0
1,652,353	+		A4249_RS08215	0.12	-0.1
1,652,353	+		A4249_RS08215	0.12	-1.0
1,652,354	-		A4249_RS08215	0.12	-0.3
1,652,354	-		A4249_RS08215	0.12	-0.2
1,652,380	+		A4249_RS08215	0.14	-0.5
1,652,420	+		A4249_RS08215	0.17	-2.3
1,652,420	+		A4249_RS08215	0.17	+0.5
1,652,524	+		A4249_RS08215	0.23	+0.5
1,652,524	+		A4249_RS08215	0.23	+0.3
1,652,524	+		A4249_RS08215	0.23	+0.0
1,652,525	-		A4249_RS08215	0.23	-0.1
1,652,525	-		A4249_RS08215	0.23	+1.5
1,652,545	+		A4249_RS08215	0.24	-0.2
1,652,545	+		A4249_RS08215	0.24	-0.2
1,652,545	+		A4249_RS08215	0.24	-1.5
1,652,545	+		A4249_RS08215	0.24	+1.2
1,652,545	+		A4249_RS08215	0.24	+0.3
1,652,545	+		A4249_RS08215	0.24	-0.5
1,652,546	-		A4249_RS08215	0.24	-0.2
1,652,546	-		A4249_RS08215	0.24	-1.2
1,652,566	+		A4249_RS08215	0.26	+0.4
1,652,566	+		A4249_RS08215	0.26	+0.1
1,652,566	+		A4249_RS08215	0.26	-0.2
1,652,567	-		A4249_RS08215	0.26	+0.2
1,652,567	-		A4249_RS08215	0.26	+0.4
1,652,567	-		A4249_RS08215	0.26	+0.2
1,652,641	+		A4249_RS08215	0.30	+0.9
1,652,641	+		A4249_RS08215	0.30	+0.4
1,652,641	+		A4249_RS08215	0.30	-0.2
1,652,641	+		A4249_RS08215	0.30	+1.1
1,652,641	+		A4249_RS08215	0.30	-0.1
1,652,641	+		A4249_RS08215	0.30	-0.1
1,652,641	+		A4249_RS08215	0.30	-0.6
1,652,641	+		A4249_RS08215	0.30	-0.3
1,652,641	+		A4249_RS08215	0.30	+0.6
1,652,641	+		A4249_RS08215	0.30	-0.2
1,652,641	+		A4249_RS08215	0.30	-0.0
1,652,641	+		A4249_RS08215	0.30	-0.0
1,652,642	-		A4249_RS08215	0.30	-0.4
1,652,642	-		A4249_RS08215	0.30	+0.1
1,652,642	-		A4249_RS08215	0.30	-0.6
1,652,642	-		A4249_RS08215	0.30	+0.4
1,652,642	-		A4249_RS08215	0.30	-0.0
1,652,642	-		A4249_RS08215	0.30	+0.0
1,652,642	-		A4249_RS08215	0.30	-0.1
1,652,642	-		A4249_RS08215	0.30	-0.1
1,652,720	+		A4249_RS08215	0.35	-0.2
1,652,720	+		A4249_RS08215	0.35	-0.1
1,652,721	-		A4249_RS08215	0.35	+0.1
1,652,821	-		A4249_RS08215	0.41	-0.9
1,652,821	-		A4249_RS08215	0.41	+0.1
1,652,833	+		A4249_RS08215	0.42	-1.3
1,652,833	+		A4249_RS08215	0.42	+1.3
1,652,833	+		A4249_RS08215	0.42	+0.5
1,652,834	-		A4249_RS08215	0.42	-0.2
1,652,911	+		A4249_RS08215	0.47	+0.1
1,652,912	-		A4249_RS08215	0.47	-0.6
1,652,912	-		A4249_RS08215	0.47	+0.0
1,652,929	+		A4249_RS08215	0.48	-0.0
1,652,930	-		A4249_RS08215	0.48	+0.3
1,652,950	+		A4249_RS08215	0.49	-0.3
1,652,950	+		A4249_RS08215	0.49	-0.6
1,652,950	+		A4249_RS08215	0.49	+0.0
1,652,950	+		A4249_RS08215	0.49	-0.1
1,652,950	+		A4249_RS08215	0.49	+0.9
1,652,950	+		A4249_RS08215	0.49	-0.1
1,652,950	+		A4249_RS08215	0.49	-0.9
1,652,950	+		A4249_RS08215	0.49	+0.2
1,652,950	+		A4249_RS08215	0.49	+0.0
1,652,950	+		A4249_RS08215	0.49	+0.4
1,652,950	+		A4249_RS08215	0.49	+0.5
1,652,950	+		A4249_RS08215	0.49	-0.1
1,652,950	+		A4249_RS08215	0.49	+0.3
1,652,950	+		A4249_RS08215	0.49	-0.0
1,652,950	+		A4249_RS08215	0.49	-0.1
1,652,950	+		A4249_RS08215	0.49	-0.5
1,652,950	+		A4249_RS08215	0.49	-0.6
1,652,950	+		A4249_RS08215	0.49	+0.3
1,652,951	-		A4249_RS08215	0.49	-0.4
1,652,951	-		A4249_RS08215	0.49	+0.5
1,652,951	-		A4249_RS08215	0.49	-0.1
1,652,951	-		A4249_RS08215	0.49	+0.2
1,652,951	-		A4249_RS08215	0.49	-0.2
1,652,951	-		A4249_RS08215	0.49	-0.3
1,652,951	-		A4249_RS08215	0.49	-0.3
1,652,951	-		A4249_RS08215	0.49	+0.5
1,652,951	-		A4249_RS08215	0.49	+0.1
1,652,951	-		A4249_RS08215	0.49	+0.4
1,652,951	-		A4249_RS08215	0.49	-0.3
1,652,951	-		A4249_RS08215	0.49	-0.2
1,652,951	-		A4249_RS08215	0.49	-0.7
1,652,951	-		A4249_RS08215	0.49	-0.2
1,652,983	+		A4249_RS08215	0.51	-0.1
1,652,983	+		A4249_RS08215	0.51	-0.6
1,652,983	+		A4249_RS08215	0.51	-0.2
1,652,983	+		A4249_RS08215	0.51	+0.2
1,652,983	+		A4249_RS08215	0.51	+0.0
1,652,983	+		A4249_RS08215	0.51	+0.3
1,652,983	+		A4249_RS08215	0.51	+0.9
1,652,983	+		A4249_RS08215	0.51	-1.6
1,652,983	+		A4249_RS08215	0.51	+1.6
1,652,983	+		A4249_RS08215	0.51	+0.1
1,652,984	-		A4249_RS08215	0.52	-1.2
1,652,984	-		A4249_RS08215	0.52	+0.0
1,652,984	-		A4249_RS08215	0.52	-0.3
1,652,984	-		A4249_RS08215	0.52	+0.8
1,652,984	-		A4249_RS08215	0.52	+0.6
1,652,984	-		A4249_RS08215	0.52	+1.8
1,652,984	-		A4249_RS08215	0.52	+0.3
1,652,984	-		A4249_RS08215	0.52	+1.0
1,652,984	-		A4249_RS08215	0.52	+0.8
1,652,984	-		A4249_RS08215	0.52	-0.0
1,653,076	+		A4249_RS08215	0.57	-0.0
1,653,076	+		A4249_RS08215	0.57	-1.0
1,653,077	-		A4249_RS08215	0.57	+0.7
1,653,077	-		A4249_RS08215	0.57	-0.7
1,653,077	-		A4249_RS08215	0.57	-0.2
1,653,094	+		A4249_RS08215	0.58	+0.5
1,653,094	+		A4249_RS08215	0.58	-1.6
1,653,094	+		A4249_RS08215	0.58	+0.4
1,653,094	+		A4249_RS08215	0.58	-0.4
1,653,094	+		A4249_RS08215	0.58	-0.3
1,653,094	+		A4249_RS08215	0.58	-0.3
1,653,095	-		A4249_RS08215	0.58	+1.0
1,653,095	-		A4249_RS08215	0.58	+0.3
1,653,095	-		A4249_RS08215	0.58	-0.2
1,653,095	-		A4249_RS08215	0.58	-0.1
1,653,095	-		A4249_RS08215	0.58	-0.8
1,653,095	-		A4249_RS08215	0.58	+0.0
1,653,130	+		A4249_RS08215	0.61	-0.1
1,653,130	+		A4249_RS08215	0.61	+0.1
1,653,130	+		A4249_RS08215	0.61	+0.5
1,653,130	+		A4249_RS08215	0.61	+0.5
1,653,131	-		A4249_RS08215	0.61	-0.3
1,653,131	-		A4249_RS08215	0.61	-0.4
1,653,239	+		A4249_RS08215	0.67	+0.1
1,653,356	+		A4249_RS08215	0.75	+1.1
1,653,357	-		A4249_RS08215	0.75	-0.4
1,653,357	-		A4249_RS08215	0.75	-0.8
1,653,357	-		A4249_RS08215	0.75	+0.6
1,653,357	-		A4249_RS08215	0.75	-0.4
1,653,357	-		A4249_RS08215	0.75	+0.1
1,653,357	-		A4249_RS08215	0.75	-0.1
1,653,394	+		A4249_RS08215	0.77	-0.5
1,653,394	+		A4249_RS08215	0.77	-0.8
1,653,394	+		A4249_RS08215	0.77	-0.3
1,653,394	+		A4249_RS08215	0.77	+0.2
1,653,394	+		A4249_RS08215	0.77	-0.4
1,653,394	+		A4249_RS08215	0.77	+0.5
1,653,394	+		A4249_RS08215	0.77	+0.8
1,653,394	+		A4249_RS08215	0.77	+0.1
1,653,395	-		A4249_RS08215	0.77	-1.0
1,653,395	-		A4249_RS08215	0.77	-0.7
1,653,395	-		A4249_RS08215	0.77	+0.5
1,653,395	-		A4249_RS08215	0.77	+0.0
1,653,395	-		A4249_RS08215	0.77	-0.4
1,653,395	-		A4249_RS08215	0.77	-1.1
1,653,395	-		A4249_RS08215	0.77	+0.4
1,653,400	+		A4249_RS08215	0.77	+0.8
1,653,400	+		A4249_RS08215	0.77	-0.9
1,653,400	+		A4249_RS08215	0.77	-1.8
1,653,400	+		A4249_RS08215	0.77	+0.2
1,653,401	-		A4249_RS08215	0.77	+0.1
1,653,401	-		A4249_RS08215	0.77	+0.4
1,653,401	-		A4249_RS08215	0.77	+0.3
1,653,401	-		A4249_RS08215	0.77	-0.3
1,653,401	-		A4249_RS08215	0.77	-0.1
1,653,440	+		A4249_RS08215	0.80	-1.2
1,653,440	+		A4249_RS08215	0.80	-0.3
1,653,440	+		A4249_RS08215	0.80	+0.1
1,653,440	+		A4249_RS08215	0.80	+0.4
1,653,441	-		A4249_RS08215	0.80	-0.9
1,653,441	-		A4249_RS08215	0.80	-2.1
1,653,441	-		A4249_RS08215	0.80	-0.2
1,653,442	+		A4249_RS08215	0.80	+1.6
1,653,443	-		A4249_RS08215	0.80	+0.2
1,653,451	+		A4249_RS08215	0.81	-0.2
1,653,451	+		A4249_RS08215	0.81	+0.1
1,653,452	-		A4249_RS08215	0.81	-0.1
1,653,517	+		A4249_RS08215	0.85	-0.1
1,653,517	+		A4249_RS08215	0.85	-0.2
1,653,518	-		A4249_RS08215	0.85	+0.5
1,653,518	-		A4249_RS08215	0.85	-0.2
1,653,602	-		A4249_RS08215	0.90	-1.0
1,653,769	+				-0.5
1,653,770	-				-0.1
1,653,770	-				+0.6
1,653,779	+				-0.5
1,653,780	-				-0.7
1,653,780	-				+0.4
1,653,780	-				-0.4
1,654,012	+		A4249_RS08220	0.17	+0.4
1,654,196	-		A4249_RS08220	0.48	+0.1
1,654,197	+		A4249_RS08220	0.48	+0.0
1,654,508	-				+0.2
1,654,523	-				-1.0
1,654,523	-				+0.1
1,654,523	-				-0.2
1,654,592	+				+0.6
1,654,592	+				-0.1
1,654,593	-				+1.2
1,654,593	-				+0.1
1,654,635	+				-0.6
1,654,636	-				+0.1
1,654,636	-				+0.6
1,654,636	-				-0.8
1,654,636	-				+0.4