Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06375 and A4249_RS06380 are separated by 3 nucleotides A4249_RS06380 and A4249_RS06385 overlap by 1 nucleotides A4249_RS06385 and A4249_RS06390 are separated by 2 nucleotides
A4249_RS06375: A4249_RS06375 - NADH-quinone oxidoreductase subunit NuoH, at 1,299,136 to 1,300,209
_RS06375
A4249_RS06380: A4249_RS06380 - NADH-quinone oxidoreductase subunit NuoG, at 1,300,213 to 1,302,258
_RS06380
A4249_RS06385: A4249_RS06385 - hypothetical protein, at 1,302,258 to 1,302,647
_RS06385
A4249_RS06390: A4249_RS06390 - NADH-quinone oxidoreductase subunit NuoF, at 1,302,650 to 1,303,963
_RS06390
Position (kb)
1300
1301
1302
1303 Strain fitness (log2 ratio)
-2
-1
0
1 at 1302.298 kb on - strand, within A4249_RS06385 at 1302.298 kb on - strand, within A4249_RS06385 at 1302.298 kb on - strand, within A4249_RS06385 at 1302.298 kb on - strand, within A4249_RS06385 at 1302.298 kb on - strand, within A4249_RS06385 at 1302.298 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.461 kb on - strand, within A4249_RS06385 at 1302.651 kb on + strand at 1302.652 kb on - strand at 1302.652 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 1,302,298 - A4249_RS06385 0.10 +0.3 1,302,298 - A4249_RS06385 0.10 -0.1 1,302,298 - A4249_RS06385 0.10 +0.3 1,302,298 - A4249_RS06385 0.10 -0.2 1,302,298 - A4249_RS06385 0.10 +0.4 1,302,298 - A4249_RS06385 0.10 -0.2 1,302,461 - A4249_RS06385 0.52 -0.1 1,302,461 - A4249_RS06385 0.52 -0.1 1,302,461 - A4249_RS06385 0.52 -0.7 1,302,461 - A4249_RS06385 0.52 -0.1 1,302,461 - A4249_RS06385 0.52 -0.4 1,302,461 - A4249_RS06385 0.52 +0.1 1,302,461 - A4249_RS06385 0.52 -0.2 1,302,461 - A4249_RS06385 0.52 +0.5 1,302,461 - A4249_RS06385 0.52 -0.1 1,302,461 - A4249_RS06385 0.52 -0.1 1,302,461 - A4249_RS06385 0.52 +0.6 1,302,461 - A4249_RS06385 0.52 +0.2 1,302,461 - A4249_RS06385 0.52 -0.4 1,302,461 - A4249_RS06385 0.52 -0.6 1,302,461 - A4249_RS06385 0.52 -0.6 1,302,461 - A4249_RS06385 0.52 +0.1 1,302,651 + +0.6 1,302,652 - -0.6 1,302,652 - -1.9
Or see this region's nucleotide sequence