Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03610 and A4249_RS03615 are separated by 101 nucleotides A4249_RS03615 and A4249_RS03620 overlap by 4 nucleotides A4249_RS03620 and A4249_RS03625 overlap by 4 nucleotides
A4249_RS03610: A4249_RS03610 - glucoamylase family protein, at 760,166 to 761,632
_RS03610
A4249_RS03615: A4249_RS03615 - sugar ABC transporter substrate-binding protein, at 761,734 to 762,912
_RS03615
A4249_RS03620: A4249_RS03620 - sugar ABC transporter permease, at 762,909 to 763,853
_RS03620
A4249_RS03625: A4249_RS03625 - carbohydrate ABC transporter permease, at 763,850 to 764,665
_RS03625
Position (kb) 761
762
763 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 760.739 kb on + strand, within A4249_RS03610 at 760.739 kb on + strand, within A4249_RS03610 at 760.739 kb on + strand, within A4249_RS03610 at 760.739 kb on + strand, within A4249_RS03610 at 760.740 kb on - strand, within A4249_RS03610 at 760.818 kb on + strand, within A4249_RS03610 at 760.818 kb on + strand, within A4249_RS03610 at 760.818 kb on + strand, within A4249_RS03610 at 760.819 kb on - strand, within A4249_RS03610 at 760.819 kb on - strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.838 kb on + strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.839 kb on - strand, within A4249_RS03610 at 760.928 kb on + strand, within A4249_RS03610 at 760.929 kb on - strand, within A4249_RS03610 at 760.929 kb on - strand, within A4249_RS03610 at 760.997 kb on + strand, within A4249_RS03610 at 760.998 kb on - strand, within A4249_RS03610 at 760.998 kb on - strand, within A4249_RS03610 at 760.998 kb on - strand, within A4249_RS03610 at 760.998 kb on - strand, within A4249_RS03610 at 761.073 kb on - strand, within A4249_RS03610 at 761.073 kb on - strand, within A4249_RS03610 at 761.073 kb on - strand, within A4249_RS03610 at 761.108 kb on + strand, within A4249_RS03610 at 761.109 kb on - strand, within A4249_RS03610 at 761.109 kb on - strand, within A4249_RS03610 at 761.109 kb on - strand, within A4249_RS03610 at 761.123 kb on + strand, within A4249_RS03610 at 761.123 kb on + strand, within A4249_RS03610 at 761.123 kb on + strand, within A4249_RS03610 at 761.124 kb on - strand, within A4249_RS03610 at 761.124 kb on - strand, within A4249_RS03610 at 761.156 kb on + strand, within A4249_RS03610 at 761.156 kb on + strand, within A4249_RS03610 at 761.156 kb on + strand, within A4249_RS03610 at 761.156 kb on + strand, within A4249_RS03610 at 761.156 kb on + strand, within A4249_RS03610 at 761.157 kb on - strand, within A4249_RS03610 at 761.246 kb on + strand, within A4249_RS03610 at 761.246 kb on + strand, within A4249_RS03610 at 761.247 kb on - strand, within A4249_RS03610 at 761.366 kb on + strand, within A4249_RS03610 at 761.366 kb on + strand, within A4249_RS03610 at 761.366 kb on + strand, within A4249_RS03610 at 761.366 kb on + strand, within A4249_RS03610 at 761.366 kb on + strand, within A4249_RS03610 at 761.367 kb on - strand, within A4249_RS03610 at 761.367 kb on - strand, within A4249_RS03610 at 761.367 kb on - strand, within A4249_RS03610 at 761.367 kb on - strand, within A4249_RS03610 at 761.381 kb on + strand, within A4249_RS03610 at 761.381 kb on + strand, within A4249_RS03610 at 761.381 kb on + strand, within A4249_RS03610 at 761.381 kb on + strand, within A4249_RS03610 at 761.381 kb on + strand, within A4249_RS03610 at 761.381 kb on + strand, within A4249_RS03610 at 761.381 kb on + strand, within A4249_RS03610 at 761.382 kb on - strand, within A4249_RS03610 at 761.382 kb on - strand, within A4249_RS03610 at 761.382 kb on - strand, within A4249_RS03610 at 761.382 kb on - strand, within A4249_RS03610 at 761.382 kb on - strand, within A4249_RS03610 at 761.382 kb on - strand, within A4249_RS03610 at 761.382 kb on - strand, within A4249_RS03610 at 761.489 kb on + strand at 761.489 kb on + strand at 761.489 kb on + strand at 761.489 kb on + strand at 761.490 kb on - strand at 761.490 kb on - strand at 761.490 kb on - strand at 761.521 kb on + strand at 761.521 kb on + strand at 761.522 kb on - strand at 761.522 kb on - strand at 761.522 kb on - strand at 761.522 kb on - strand at 761.522 kb on - strand at 761.522 kb on - strand at 761.522 kb on - strand at 761.558 kb on + strand at 761.558 kb on + strand at 761.558 kb on + strand at 761.558 kb on + strand at 761.558 kb on + strand at 761.559 kb on - strand at 761.559 kb on - strand at 761.559 kb on - strand at 761.560 kb on + strand at 761.560 kb on + strand at 761.560 kb on + strand at 761.560 kb on + strand at 761.560 kb on + strand at 761.560 kb on + strand at 761.561 kb on - strand at 761.561 kb on - strand at 761.561 kb on - strand at 761.661 kb on + strand at 761.661 kb on + strand at 761.662 kb on - strand at 761.875 kb on + strand, within A4249_RS03615 at 761.876 kb on - strand, within A4249_RS03615 at 761.876 kb on - strand, within A4249_RS03615 at 761.916 kb on + strand, within A4249_RS03615 at 761.916 kb on + strand, within A4249_RS03615 at 761.916 kb on + strand, within A4249_RS03615 at 761.916 kb on + strand, within A4249_RS03615 at 761.917 kb on - strand, within A4249_RS03615 at 761.917 kb on - strand, within A4249_RS03615 at 762.008 kb on + strand, within A4249_RS03615 at 762.008 kb on + strand, within A4249_RS03615 at 762.009 kb on - strand, within A4249_RS03615 at 762.009 kb on - strand, within A4249_RS03615 at 762.009 kb on - strand, within A4249_RS03615 at 762.009 kb on - strand, within A4249_RS03615 at 762.009 kb on - strand, within A4249_RS03615 at 762.009 kb on - strand, within A4249_RS03615 at 762.052 kb on + strand, within A4249_RS03615 at 762.052 kb on + strand, within A4249_RS03615 at 762.052 kb on + strand, within A4249_RS03615 at 762.052 kb on + strand, within A4249_RS03615 at 762.052 kb on + strand, within A4249_RS03615 at 762.052 kb on + strand, within A4249_RS03615 at 762.053 kb on - strand, within A4249_RS03615 at 762.053 kb on - strand, within A4249_RS03615 at 762.053 kb on - strand, within A4249_RS03615 at 762.053 kb on - strand, within A4249_RS03615 at 762.076 kb on + strand, within A4249_RS03615 at 762.076 kb on + strand, within A4249_RS03615 at 762.077 kb on - strand, within A4249_RS03615 at 762.077 kb on - strand, within A4249_RS03615 at 762.077 kb on - strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.184 kb on + strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.185 kb on - strand, within A4249_RS03615 at 762.270 kb on + strand, within A4249_RS03615 at 762.270 kb on + strand, within A4249_RS03615 at 762.319 kb on + strand, within A4249_RS03615 at 762.320 kb on - strand, within A4249_RS03615 at 762.320 kb on - strand, within A4249_RS03615 at 762.320 kb on - strand, within A4249_RS03615 at 762.320 kb on - strand, within A4249_RS03615 at 762.403 kb on + strand, within A4249_RS03615 at 762.404 kb on - strand, within A4249_RS03615 at 762.404 kb on - strand, within A4249_RS03615 at 762.404 kb on - strand, within A4249_RS03615 at 762.415 kb on + strand, within A4249_RS03615 at 762.415 kb on + strand, within A4249_RS03615 at 762.415 kb on + strand, within A4249_RS03615 at 762.416 kb on - strand, within A4249_RS03615 at 762.416 kb on - strand, within A4249_RS03615 at 762.416 kb on - strand, within A4249_RS03615 at 762.416 kb on - strand, within A4249_RS03615 at 762.416 kb on - strand, within A4249_RS03615 at 762.416 kb on - strand, within A4249_RS03615 at 762.598 kb on + strand, within A4249_RS03615 at 762.598 kb on + strand, within A4249_RS03615 at 762.598 kb on + strand, within A4249_RS03615 at 762.599 kb on - strand, within A4249_RS03615 at 762.599 kb on - strand, within A4249_RS03615 at 762.778 kb on + strand, within A4249_RS03615 at 762.817 kb on + strand at 762.817 kb on + strand at 762.817 kb on + strand at 762.817 kb on + strand at 762.818 kb on - strand at 762.818 kb on - strand at 762.818 kb on - strand at 762.818 kb on - strand at 762.819 kb on + strand at 762.819 kb on + strand at 762.819 kb on + strand at 762.819 kb on + strand at 762.819 kb on + strand at 762.819 kb on + strand at 762.820 kb on - strand at 762.820 kb on - strand at 762.820 kb on - strand at 762.820 kb on - strand at 762.820 kb on - strand at 762.820 kb on - strand at 762.820 kb on - strand at 762.908 kb on + strand at 762.908 kb on + strand at 762.909 kb on - strand at 762.909 kb on - strand at 762.909 kb on - strand at 762.909 kb on - strand at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.089 kb on + strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.090 kb on - strand, within A4249_RS03620 at 763.137 kb on + strand, within A4249_RS03620 at 763.137 kb on + strand, within A4249_RS03620 at 763.138 kb on - strand, within A4249_RS03620 at 763.138 kb on - strand, within A4249_RS03620 at 763.308 kb on + strand, within A4249_RS03620 at 763.308 kb on + strand, within A4249_RS03620 at 763.308 kb on + strand, within A4249_RS03620 at 763.308 kb on + strand, within A4249_RS03620 at 763.309 kb on - strand, within A4249_RS03620 at 763.309 kb on - strand, within A4249_RS03620 at 763.309 kb on - strand, within A4249_RS03620 at 763.309 kb on - strand, within A4249_RS03620 at 763.309 kb on - strand, within A4249_RS03620 at 763.340 kb on - strand, within A4249_RS03620 at 763.347 kb on + strand, within A4249_RS03620 at 763.347 kb on + strand, within A4249_RS03620 at 763.347 kb on + strand, within A4249_RS03620 at 763.482 kb on + strand, within A4249_RS03620 at 763.483 kb on - strand, within A4249_RS03620 at 763.483 kb on - strand, within A4249_RS03620 at 763.483 kb on - strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.487 kb on + strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.488 kb on - strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.533 kb on + strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.534 kb on - strand, within A4249_RS03620 at 763.668 kb on + strand, within A4249_RS03620 at 763.668 kb on + strand, within A4249_RS03620 at 763.669 kb on - strand, within A4249_RS03620 at 763.669 kb on - strand, within A4249_RS03620 at 763.669 kb on - strand, within A4249_RS03620 at 763.669 kb on - strand, within A4249_RS03620 at 763.669 kb on - strand, within A4249_RS03620 at 763.669 kb on - strand, within A4249_RS03620 at 763.716 kb on + strand, within A4249_RS03620 at 763.716 kb on + strand, within A4249_RS03620 at 763.716 kb on + strand, within A4249_RS03620 at 763.716 kb on + strand, within A4249_RS03620 at 763.717 kb on - strand, within A4249_RS03620 at 763.717 kb on - strand, within A4249_RS03620 at 763.725 kb on + strand, within A4249_RS03620 at 763.726 kb on - strand, within A4249_RS03620 at 763.726 kb on - strand, within A4249_RS03620 at 763.726 kb on - strand, within A4249_RS03620 at 763.726 kb on - strand, within A4249_RS03620 at 763.726 kb on - strand, within A4249_RS03620 at 763.793 kb on + strand at 763.793 kb on + strand at 763.793 kb on + strand at 763.793 kb on + strand at 763.794 kb on - strand at 763.845 kb on + strand at 763.845 kb on + strand at 763.845 kb on + strand at 763.846 kb on - strand at 763.846 kb on - strand at 763.846 kb on - strand at 763.846 kb on - strand at 763.846 kb on - strand at 763.846 kb on - strand at 763.901 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 760,739 + A4249_RS03610 0.39 +0.8 760,739 + A4249_RS03610 0.39 -0.7 760,739 + A4249_RS03610 0.39 +0.5 760,739 + A4249_RS03610 0.39 -1.1 760,740 - A4249_RS03610 0.39 -0.9 760,818 + A4249_RS03610 0.44 +0.0 760,818 + A4249_RS03610 0.44 -2.1 760,818 + A4249_RS03610 0.44 +0.5 760,819 - A4249_RS03610 0.45 +0.6 760,819 - A4249_RS03610 0.45 +1.1 760,838 + A4249_RS03610 0.46 +0.9 760,838 + A4249_RS03610 0.46 +0.7 760,838 + A4249_RS03610 0.46 -2.2 760,838 + A4249_RS03610 0.46 +1.0 760,838 + A4249_RS03610 0.46 +0.5 760,838 + A4249_RS03610 0.46 +0.8 760,838 + A4249_RS03610 0.46 -0.3 760,838 + A4249_RS03610 0.46 +0.1 760,838 + A4249_RS03610 0.46 -0.5 760,838 + A4249_RS03610 0.46 +0.9 760,838 + A4249_RS03610 0.46 -0.1 760,838 + A4249_RS03610 0.46 +0.9 760,838 + A4249_RS03610 0.46 -0.6 760,838 + A4249_RS03610 0.46 -0.6 760,839 - A4249_RS03610 0.46 -0.6 760,839 - A4249_RS03610 0.46 +0.1 760,839 - A4249_RS03610 0.46 -0.4 760,839 - A4249_RS03610 0.46 +0.2 760,839 - A4249_RS03610 0.46 -0.3 760,839 - A4249_RS03610 0.46 +0.1 760,839 - A4249_RS03610 0.46 -0.0 760,839 - A4249_RS03610 0.46 -0.7 760,839 - A4249_RS03610 0.46 +0.1 760,839 - A4249_RS03610 0.46 -0.3 760,839 - A4249_RS03610 0.46 +0.2 760,928 + A4249_RS03610 0.52 -0.7 760,929 - A4249_RS03610 0.52 +0.0 760,929 - A4249_RS03610 0.52 -0.1 760,997 + A4249_RS03610 0.57 -2.3 760,998 - A4249_RS03610 0.57 -0.0 760,998 - A4249_RS03610 0.57 -0.4 760,998 - A4249_RS03610 0.57 -0.6 760,998 - A4249_RS03610 0.57 -0.2 761,073 - A4249_RS03610 0.62 -0.5 761,073 - A4249_RS03610 0.62 -0.8 761,073 - A4249_RS03610 0.62 -1.2 761,108 + A4249_RS03610 0.64 +0.4 761,109 - A4249_RS03610 0.64 -0.9 761,109 - A4249_RS03610 0.64 -0.7 761,109 - A4249_RS03610 0.64 -0.7 761,123 + A4249_RS03610 0.65 -0.8 761,123 + A4249_RS03610 0.65 +0.1 761,123 + A4249_RS03610 0.65 -1.4 761,124 - A4249_RS03610 0.65 -0.2 761,124 - A4249_RS03610 0.65 -0.3 761,156 + A4249_RS03610 0.67 -2.4 761,156 + A4249_RS03610 0.67 -0.5 761,156 + A4249_RS03610 0.67 -0.3 761,156 + A4249_RS03610 0.67 -0.6 761,156 + A4249_RS03610 0.67 +0.1 761,157 - A4249_RS03610 0.68 +0.1 761,246 + A4249_RS03610 0.74 -0.2 761,246 + A4249_RS03610 0.74 -1.0 761,247 - A4249_RS03610 0.74 +0.3 761,366 + A4249_RS03610 0.82 +0.1 761,366 + A4249_RS03610 0.82 -0.1 761,366 + A4249_RS03610 0.82 -0.2 761,366 + A4249_RS03610 0.82 -0.2 761,366 + A4249_RS03610 0.82 +0.5 761,367 - A4249_RS03610 0.82 -0.3 761,367 - A4249_RS03610 0.82 +0.1 761,367 - A4249_RS03610 0.82 +0.6 761,367 - A4249_RS03610 0.82 -0.1 761,381 + A4249_RS03610 0.83 -0.5 761,381 + A4249_RS03610 0.83 -0.9 761,381 + A4249_RS03610 0.83 +0.3 761,381 + A4249_RS03610 0.83 -0.4 761,381 + A4249_RS03610 0.83 +0.6 761,381 + A4249_RS03610 0.83 +0.2 761,381 + A4249_RS03610 0.83 +0.8 761,382 - A4249_RS03610 0.83 -0.1 761,382 - A4249_RS03610 0.83 -0.3 761,382 - A4249_RS03610 0.83 +0.8 761,382 - A4249_RS03610 0.83 +0.4 761,382 - A4249_RS03610 0.83 +1.0 761,382 - A4249_RS03610 0.83 -0.3 761,382 - A4249_RS03610 0.83 +0.9 761,489 + +0.4 761,489 + +0.7 761,489 + -0.6 761,489 + -1.4 761,490 - +0.5 761,490 - +0.1 761,490 - 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Or see this region's nucleotide sequence