Experiment: Control_ECOR38
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt moaC and moaD overlap by 8 nucleotides moaD and moaE are separated by 1 nucleotides moaE and ybhL are separated by 136 nucleotides ybhL and ybhM are separated by 206 nucleotides ybhM and ybhN are separated by 35 nucleotides
HEPCGN_01680: moaC - cyclic pyranopterin monophosphate synthase MoaC, at 260,265 to 260,750
moaC
HEPCGN_01685: moaD - molybdopterin synthase sulfur carrier subunit, at 260,743 to 260,988
moaD
HEPCGN_01690: moaE - molybdopterin synthase catalytic subunit MoaE, at 260,990 to 261,442
moaE
HEPCGN_01695: ybhL - Inner membrane protein YbhL, at 261,579 to 262,283
ybhL
HEPCGN_01700: ybhM - Uncharacterized protein YbhM, at 262,490 to 263,203
ybhM
HEPCGN_01705: ybhN - Inner membrane protein YbhN, at 263,239 to 264,195
ybhN
Position (kb) 261
262
263 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 260.643 kb on + strand, within moaC at 260.643 kb on + strand, within moaC at 260.677 kb on + strand, within moaC at 260.677 kb on + strand, within moaC at 260.678 kb on - strand, within moaC at 260.729 kb on + strand at 260.730 kb on - strand at 260.748 kb on + strand at 260.749 kb on - strand at 260.957 kb on + strand, within moaD at 260.958 kb on - strand, within moaD at 261.112 kb on + strand, within moaE at 261.329 kb on - strand, within moaE at 261.338 kb on + strand, within moaE at 261.495 kb on + strand at 261.495 kb on + strand at 261.495 kb on + strand at 261.496 kb on - strand at 261.542 kb on - strand at 261.547 kb on + strand at 261.559 kb on + strand at 261.560 kb on - strand at 261.561 kb on + strand at 261.562 kb on - strand at 261.562 kb on - strand at 261.611 kb on - strand at 261.636 kb on + strand at 261.636 kb on + strand at 261.637 kb on - strand at 261.637 kb on - strand at 261.651 kb on + strand, within ybhL at 261.667 kb on + strand, within ybhL at 261.667 kb on + strand, within ybhL at 261.668 kb on - strand, within ybhL at 261.707 kb on + strand, within ybhL at 261.722 kb on + strand, within ybhL at 261.730 kb on + strand, within ybhL at 261.730 kb on + strand, within ybhL at 261.731 kb on - strand, within ybhL at 261.731 kb on - strand, within ybhL at 261.733 kb on + strand, within ybhL at 261.766 kb on + strand, within ybhL at 261.767 kb on - strand, within ybhL at 261.767 kb on - strand, within ybhL at 261.769 kb on + strand, within ybhL at 261.779 kb on - strand, within ybhL at 261.789 kb on - strand, within ybhL at 261.796 kb on + strand, within ybhL at 261.830 kb on - strand, within ybhL at 261.900 kb on - strand, within ybhL at 261.911 kb on + strand, within ybhL at 261.989 kb on - strand, within ybhL at 261.989 kb on - strand, within ybhL at 262.004 kb on + strand, within ybhL at 262.014 kb on - strand, within ybhL at 262.092 kb on + strand, within ybhL at 262.128 kb on + strand, within ybhL at 262.129 kb on - strand, within ybhL at 262.224 kb on + strand at 262.225 kb on - strand at 262.225 kb on - strand at 262.708 kb on + strand, within ybhM at 262.850 kb on - strand, within ybhM at 263.032 kb on + strand, within ybhM at 263.074 kb on - strand, within ybhM at 263.099 kb on - strand, within ybhM at 263.109 kb on + strand, within ybhM at 263.117 kb on + strand, within ybhM at 263.118 kb on - strand, within ybhM at 263.157 kb on + strand at 263.157 kb on + strand at 263.161 kb on + strand at 263.161 kb on + strand at 263.164 kb on - strand at 263.208 kb on - strand at 263.217 kb on + strand at 263.230 kb on - strand at 263.235 kb on + strand at 263.235 kb on + strand at 263.235 kb on + strand at 263.236 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR38 remove 260,643 + moaC HEPCGN_01680 0.78 -0.5 260,643 + moaC HEPCGN_01680 0.78 -0.1 260,677 + moaC HEPCGN_01680 0.85 +0.2 260,677 + moaC HEPCGN_01680 0.85 -0.2 260,678 - moaC HEPCGN_01680 0.85 +0.2 260,729 + -0.8 260,730 - -1.0 260,748 + -1.9 260,749 - -0.3 260,957 + moaD HEPCGN_01685 0.87 +0.4 260,958 - moaD HEPCGN_01685 0.87 -0.4 261,112 + moaE HEPCGN_01690 0.27 -0.2 261,329 - moaE HEPCGN_01690 0.75 -1.1 261,338 + moaE HEPCGN_01690 0.77 -0.3 261,495 + -1.3 261,495 + +0.2 261,495 + -0.1 261,496 - +0.6 261,542 - -0.0 261,547 + +0.3 261,559 + -0.5 261,560 - +0.5 261,561 + -0.1 261,562 - +0.5 261,562 - +0.1 261,611 - +0.2 261,636 + -3.7 261,636 + +0.8 261,637 - -0.6 261,637 - -0.3 261,651 + ybhL HEPCGN_01695 0.10 -0.9 261,667 + ybhL HEPCGN_01695 0.12 +0.7 261,667 + ybhL HEPCGN_01695 0.12 -0.2 261,668 - ybhL HEPCGN_01695 0.13 +0.8 261,707 + ybhL HEPCGN_01695 0.18 +0.2 261,722 + ybhL HEPCGN_01695 0.20 -0.0 261,730 + ybhL HEPCGN_01695 0.21 +0.2 261,730 + ybhL HEPCGN_01695 0.21 -0.2 261,731 - ybhL HEPCGN_01695 0.22 +0.1 261,731 - ybhL HEPCGN_01695 0.22 +1.6 261,733 + ybhL HEPCGN_01695 0.22 -0.2 261,766 + ybhL HEPCGN_01695 0.27 -0.5 261,767 - ybhL HEPCGN_01695 0.27 +0.4 261,767 - ybhL HEPCGN_01695 0.27 +0.0 261,769 + ybhL HEPCGN_01695 0.27 +0.1 261,779 - ybhL HEPCGN_01695 0.28 -0.4 261,789 - ybhL HEPCGN_01695 0.30 -0.2 261,796 + ybhL HEPCGN_01695 0.31 -0.3 261,830 - ybhL HEPCGN_01695 0.36 +0.1 261,900 - ybhL HEPCGN_01695 0.46 +0.1 261,911 + ybhL HEPCGN_01695 0.47 -0.2 261,989 - ybhL HEPCGN_01695 0.58 +0.7 261,989 - ybhL HEPCGN_01695 0.58 +0.0 262,004 + ybhL HEPCGN_01695 0.60 -0.3 262,014 - ybhL HEPCGN_01695 0.62 -0.0 262,092 + ybhL HEPCGN_01695 0.73 -0.2 262,128 + ybhL HEPCGN_01695 0.78 -0.2 262,129 - ybhL HEPCGN_01695 0.78 +0.7 262,224 + +0.1 262,225 - +0.2 262,225 - -0.0 262,708 + ybhM HEPCGN_01700 0.31 -1.3 262,850 - ybhM HEPCGN_01700 0.50 +0.1 263,032 + ybhM HEPCGN_01700 0.76 -0.2 263,074 - ybhM HEPCGN_01700 0.82 -0.3 263,099 - ybhM HEPCGN_01700 0.85 +0.1 263,109 + ybhM HEPCGN_01700 0.87 +1.4 263,117 + ybhM HEPCGN_01700 0.88 -0.1 263,118 - ybhM HEPCGN_01700 0.88 -1.9 263,157 + +0.2 263,157 + -0.1 263,161 + -1.4 263,161 + -0.1 263,164 - +0.0 263,208 - -0.2 263,217 + -0.7 263,230 - -0.2 263,235 + -0.6 263,235 + +1.0 263,235 + -1.6 263,236 - +0.1
Or see this region's nucleotide sequence