Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13845

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,795,516	+				+0.0
2,795,516	+				+0.9
2,795,516	+				-0.1
2,795,516	+				-0.9
2,795,516	+				-0.8
2,795,516	+				+0.1
2,795,516	+				+0.2
2,795,516	+				+0.0
2,795,516	+				+0.2
2,795,516	+				+0.4
2,795,517	-				-0.3
2,795,517	-				-2.4
2,795,517	-				+0.4
2,795,517	-				-0.3
2,795,517	-				+0.9
2,795,517	-				+0.3
2,795,533	+				+0.2
2,795,533	+				+0.3
2,795,534	-				+0.3
2,795,534	-				+0.5
2,795,534	-				+0.2
2,795,655	+		A4249_RS16675	0.15	-0.3
2,795,655	+		A4249_RS16675	0.15	-0.5
2,795,655	+		A4249_RS16675	0.15	+0.1
2,795,655	+		A4249_RS16675	0.15	-0.9
2,795,655	+		A4249_RS16675	0.15	-0.2
2,795,655	+		A4249_RS16675	0.15	+0.2
2,795,655	+		A4249_RS16675	0.15	+0.8
2,795,655	+		A4249_RS16675	0.15	+0.4
2,795,655	+		A4249_RS16675	0.15	+0.3
2,795,655	+		A4249_RS16675	0.15	-0.1
2,795,655	+		A4249_RS16675	0.15	+0.3
2,795,656	-		A4249_RS16675	0.15	-0.1
2,795,656	-		A4249_RS16675	0.15	-0.2
2,795,656	-		A4249_RS16675	0.15	-0.1
2,795,656	-		A4249_RS16675	0.15	-0.8
2,795,656	-		A4249_RS16675	0.15	-0.8
2,795,656	-		A4249_RS16675	0.15	-0.3
2,795,656	-		A4249_RS16675	0.15	-0.1
2,795,656	-		A4249_RS16675	0.15	+0.4
2,795,656	-		A4249_RS16675	0.15	-1.6
2,795,656	-		A4249_RS16675	0.15	-1.0
2,795,656	-		A4249_RS16675	0.15	+0.5
2,795,720	+		A4249_RS16675	0.21	-0.5
2,795,721	-		A4249_RS16675	0.21	+0.5
2,795,721	-		A4249_RS16675	0.21	-1.4
2,795,780	+		A4249_RS16675	0.28	+0.6
2,795,794	+		A4249_RS16675	0.29	-0.8
2,795,795	-		A4249_RS16675	0.29	-0.8
2,795,795	-		A4249_RS16675	0.29	-1.1
2,795,831	+		A4249_RS16675	0.33	+0.1
2,795,831	+		A4249_RS16675	0.33	+0.4
2,795,831	+		A4249_RS16675	0.33	+1.2
2,795,831	+		A4249_RS16675	0.33	+0.3
2,795,831	+		A4249_RS16675	0.33	+0.3
2,795,832	-		A4249_RS16675	0.33	+0.5
2,795,833	+		A4249_RS16675	0.33	-0.1
2,795,834	-		A4249_RS16675	0.33	-0.1
2,795,834	-		A4249_RS16675	0.33	-0.9
2,795,834	-		A4249_RS16675	0.33	+0.6
2,795,834	-		A4249_RS16675	0.33	-1.1
2,795,954	+		A4249_RS16675	0.46	+0.3
2,795,955	-		A4249_RS16675	0.46	-0.4
2,795,955	-		A4249_RS16675	0.46	-0.7
2,795,955	-		A4249_RS16675	0.46	+0.3
2,795,955	-		A4249_RS16675	0.46	+0.2
2,795,994	+		A4249_RS16675	0.50	-1.1
2,796,045	+		A4249_RS16675	0.56	-0.8
2,796,091	-		A4249_RS16675	0.60	+1.0
2,796,127	+		A4249_RS16675	0.64	+1.7
2,796,128	-		A4249_RS16675	0.64	+0.3
2,796,159	-		A4249_RS16675	0.68	-0.5
2,796,172	+		A4249_RS16675	0.69	-0.5
2,796,219	+		A4249_RS16675	0.74	+0.1
2,796,228	-		A4249_RS16675	0.75	-0.3
2,796,247	+		A4249_RS16675	0.77	-0.1
2,796,248	-		A4249_RS16675	0.77	+0.6
2,796,345	+		A4249_RS16675	0.87	-1.8
2,796,345	+		A4249_RS16675	0.87	-0.1
2,796,346	-		A4249_RS16675	0.87	+0.0
2,796,346	-		A4249_RS16675	0.87	+0.2
2,796,361	-		A4249_RS16675	0.89	-0.5
2,796,361	-		A4249_RS16675	0.89	-0.1
2,796,361	-		A4249_RS16675	0.89	-0.4
2,796,428	+				+0.1
2,796,428	+				-0.7
2,796,428	+				+1.2
2,796,428	+				-0.0
2,796,428	+				-0.3
2,796,428	+				+0.3
2,796,429	-				-0.2
2,796,429	-				-0.4
2,796,429	-				-0.0
2,796,429	-				-1.2
2,796,457	+				-0.5
2,796,457	+				-0.6
2,796,458	-				-0.2
2,796,458	-				-0.1
2,796,458	-				+0.0
2,796,471	+				-0.6
2,796,472	-				+0.1
2,796,472	-				-0.3
2,796,502	+				-0.3
2,796,502	+				+0.2
2,796,502	+				+0.9
2,796,503	-				-0.0
2,796,503	-				+0.1
2,796,503	-				-0.2
2,796,634	+		A4249_RS13845	0.12	+1.0
2,796,634	+		A4249_RS13845	0.12	+0.6
2,796,634	+		A4249_RS13845	0.12	-0.5
2,796,635	-		A4249_RS13845	0.12	+0.0
2,796,635	-		A4249_RS13845	0.12	+0.0
2,796,635	-		A4249_RS13845	0.12	-0.7
2,796,751	+		A4249_RS13845	0.22	-1.6
2,796,752	-		A4249_RS13845	0.22	-1.6
2,796,763	+		A4249_RS13845	0.23	-0.8
2,796,763	+		A4249_RS13845	0.23	+1.4
2,796,763	+		A4249_RS13845	0.23	-0.0
2,796,764	-		A4249_RS13845	0.23	+0.7
2,796,841	+		A4249_RS13845	0.29	+0.8
2,796,841	+		A4249_RS13845	0.29	-0.1
2,796,842	-		A4249_RS13845	0.30	+0.8
2,796,842	-		A4249_RS13845	0.30	+0.9
2,796,842	-		A4249_RS13845	0.30	+0.4
2,796,842	-		A4249_RS13845	0.30	-0.3
2,796,842	-		A4249_RS13845	0.30	+0.4
2,796,842	-		A4249_RS13845	0.30	-0.3
2,796,943	+		A4249_RS13845	0.38	+0.1
2,796,943	+		A4249_RS13845	0.38	+0.3
2,796,943	+		A4249_RS13845	0.38	-0.5
2,796,943	+		A4249_RS13845	0.38	-0.5
2,796,943	+		A4249_RS13845	0.38	-0.2
2,796,943	+		A4249_RS13845	0.38	+0.8
2,796,944	-		A4249_RS13845	0.38	+0.3
2,796,944	-		A4249_RS13845	0.38	+0.3
2,796,944	-		A4249_RS13845	0.38	+0.6
2,796,944	-		A4249_RS13845	0.38	+0.1
2,796,944	-		A4249_RS13845	0.38	+0.1
2,796,945	-		A4249_RS13845	0.38	+0.6
2,796,946	+		A4249_RS13845	0.39	+0.2
2,796,946	+		A4249_RS13845	0.39	+1.0
2,796,947	-		A4249_RS13845	0.39	-0.1
2,796,982	+		A4249_RS13845	0.42	-0.1
2,796,982	+		A4249_RS13845	0.42	-1.1
2,796,983	-		A4249_RS13845	0.42	-0.3
2,796,983	-		A4249_RS13845	0.42	+0.8
2,796,983	-		A4249_RS13845	0.42	+0.1
2,796,983	-		A4249_RS13845	0.42	+0.8
2,796,983	-		A4249_RS13845	0.42	+0.3
2,797,064	+		A4249_RS13845	0.49	+0.0
2,797,064	+		A4249_RS13845	0.49	-0.6
2,797,064	+		A4249_RS13845	0.49	-0.5
2,797,064	+		A4249_RS13845	0.49	+0.9
2,797,064	+		A4249_RS13845	0.49	+0.2
2,797,064	+		A4249_RS13845	0.49	-0.1
2,797,064	+		A4249_RS13845	0.49	-0.1
2,797,064	+		A4249_RS13845	0.49	-1.1
2,797,064	+		A4249_RS13845	0.49	+1.0
2,797,064	+		A4249_RS13845	0.49	-2.0
2,797,064	+		A4249_RS13845	0.49	-0.8
2,797,065	-		A4249_RS13845	0.49	+1.5
2,797,065	-		A4249_RS13845	0.49	+0.3
2,797,065	-		A4249_RS13845	0.49	-0.0
2,797,065	-		A4249_RS13845	0.49	-0.2
2,797,065	-		A4249_RS13845	0.49	+1.2
2,797,065	-		A4249_RS13845	0.49	-0.4
2,797,065	-		A4249_RS13845	0.49	+0.7
2,797,065	-		A4249_RS13845	0.49	-0.3
2,797,065	-		A4249_RS13845	0.49	-0.2
2,797,065	-		A4249_RS13845	0.49	-0.3
2,797,065	-		A4249_RS13845	0.49	+0.0
2,797,065	-		A4249_RS13845	0.49	+0.6
2,797,189	+		A4249_RS13845	0.60	-0.0
2,797,189	+		A4249_RS13845	0.60	+1.4
2,797,189	+		A4249_RS13845	0.60	+0.2
2,797,189	+		A4249_RS13845	0.60	-0.2
2,797,189	+		A4249_RS13845	0.60	-0.1
2,797,190	-		A4249_RS13845	0.60	-0.4
2,797,190	-		A4249_RS13845	0.60	-0.6
2,797,190	-		A4249_RS13845	0.60	-0.1
2,797,190	-		A4249_RS13845	0.60	-0.2
2,797,190	-		A4249_RS13845	0.60	-0.0
2,797,361	-		A4249_RS13845	0.74	+0.3
2,797,694	+				+0.1
2,797,694	+				+1.0
2,797,695	-				-0.5
2,797,706	+				-0.2
2,797,707	-				-0.2
2,797,707	-				-0.1
2,797,712	-				+0.2
2,797,799	+				+0.4
2,797,799	+				+0.7
2,797,800	-				+0.3
2,797,904	+		A4249_RS13850	0.46	+0.1
2,797,904	+		A4249_RS13850	0.46	-0.3
2,797,904	+		A4249_RS13850	0.46	-0.8
2,797,905	-		A4249_RS13850	0.46	-1.1
2,798,038	+				-0.6
2,798,038	+				-1.6
2,798,038	+				-0.3
2,798,038	+				+1.2
2,798,039	-				+1.4
2,798,039	-				-0.8
2,798,039	-				-1.6
2,798,039	-				-0.4
2,798,039	-				-0.6
2,798,119	+		A4249_RS13855	0.18	+0.1
2,798,119	+		A4249_RS13855	0.18	+1.8
2,798,120	-		A4249_RS13855	0.18	-1.2
2,798,120	-		A4249_RS13855	0.18	+0.1
2,798,120	-		A4249_RS13855	0.18	+0.3
2,798,255	+		A4249_RS13855	0.42	+0.2
2,798,255	+		A4249_RS13855	0.42	+2.0
2,798,255	+		A4249_RS13855	0.42	-1.4
2,798,255	+		A4249_RS13855	0.42	-0.6
2,798,491	+		A4249_RS13855	0.83	-0.2
2,798,491	+		A4249_RS13855	0.83	+0.1
2,798,491	+		A4249_RS13855	0.83	+0.7
2,798,491	+		A4249_RS13855	0.83	+0.2
2,798,491	+		A4249_RS13855	0.83	+0.7
2,798,492	-		A4249_RS13855	0.83	+0.4
2,798,492	-		A4249_RS13855	0.83	-1.7
2,798,492	-		A4249_RS13855	0.83	-0.3