Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12610

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,526,719	+		A4249_RS12605	0.20	+0.0
2,526,719	+		A4249_RS12605	0.20	-0.7
2,526,719	+		A4249_RS12605	0.20	+0.5
2,526,719	+		A4249_RS12605	0.20	-0.1
2,526,719	+		A4249_RS12605	0.20	-0.6
2,526,719	+		A4249_RS12605	0.20	+0.4
2,526,720	-		A4249_RS12605	0.20	-0.7
2,526,720	-		A4249_RS12605	0.20	+0.2
2,526,720	-		A4249_RS12605	0.20	-1.1
2,526,721	+		A4249_RS12605	0.20	-0.3
2,526,721	+		A4249_RS12605	0.20	-0.3
2,526,721	+		A4249_RS12605	0.20	+0.0
2,526,721	+		A4249_RS12605	0.20	-0.2
2,526,721	+		A4249_RS12605	0.20	-0.3
2,526,721	+		A4249_RS12605	0.20	-0.7
2,526,722	-		A4249_RS12605	0.20	-1.4
2,526,722	-		A4249_RS12605	0.20	+0.2
2,526,722	-		A4249_RS12605	0.20	+0.0
2,526,722	-		A4249_RS12605	0.20	-0.0
2,526,865	+		A4249_RS12605	0.32	-0.1
2,526,908	+		A4249_RS12605	0.36	-0.7
2,526,909	-		A4249_RS12605	0.36	+0.3
2,526,953	+		A4249_RS12605	0.39	+0.2
2,526,953	+		A4249_RS12605	0.39	-0.1
2,526,953	+		A4249_RS12605	0.39	-0.2
2,526,954	-		A4249_RS12605	0.39	-0.1
2,526,954	-		A4249_RS12605	0.39	-0.2
2,526,983	+		A4249_RS12605	0.42	-0.3
2,526,984	-		A4249_RS12605	0.42	-0.4
2,527,197	-		A4249_RS12605	0.60	-1.6
2,527,385	+		A4249_RS12605	0.75	-0.8
2,527,385	+		A4249_RS12605	0.75	-0.2
2,527,385	+		A4249_RS12605	0.75	-0.1
2,527,385	+		A4249_RS12605	0.75	+0.3
2,527,386	-		A4249_RS12605	0.75	-0.2
2,527,386	-		A4249_RS12605	0.75	-0.4
2,527,418	-		A4249_RS12605	0.78	-0.6
2,527,481	+		A4249_RS12605	0.83	+0.3
2,527,481	+		A4249_RS12605	0.83	-0.4
2,527,481	+		A4249_RS12605	0.83	+0.5
2,527,482	-		A4249_RS12605	0.83	+0.4
2,527,482	-		A4249_RS12605	0.83	-0.0
2,528,380	+		A4249_RS12610	0.31	+0.6
2,528,380	+		A4249_RS12610	0.31	+0.6
2,528,381	-		A4249_RS12610	0.31	+0.2
2,528,381	-		A4249_RS12610	0.31	-0.0
2,528,440	+		A4249_RS12610	0.34	-0.2
2,528,441	-		A4249_RS12610	0.34	-0.1
2,528,449	+		A4249_RS12610	0.34	+0.2
2,528,449	+		A4249_RS12610	0.34	+0.0
2,528,449	+		A4249_RS12610	0.34	+0.1
2,528,449	+		A4249_RS12610	0.34	+0.2
2,528,450	-		A4249_RS12610	0.34	-0.3
2,528,483	-		A4249_RS12610	0.36	+0.3
2,528,483	-		A4249_RS12610	0.36	-0.5
2,528,483	-		A4249_RS12610	0.36	-0.1
2,528,483	-		A4249_RS12610	0.36	-0.1
2,528,534	-		A4249_RS12610	0.38	-0.6
2,528,534	-		A4249_RS12610	0.38	+0.5
2,528,701	+		A4249_RS12610	0.46	+0.9
2,528,701	+		A4249_RS12610	0.46	-0.6
2,528,701	+		A4249_RS12610	0.46	+0.8
2,528,701	+		A4249_RS12610	0.46	-0.4
2,528,701	+		A4249_RS12610	0.46	-0.6
2,528,702	-		A4249_RS12610	0.46	-0.1
2,528,702	-		A4249_RS12610	0.46	+0.2
2,528,833	+		A4249_RS12610	0.52	+1.0
2,528,834	-		A4249_RS12610	0.52	-0.1
2,528,834	-		A4249_RS12610	0.52	+0.5
2,528,872	+		A4249_RS12610	0.53	+0.0
2,528,872	+		A4249_RS12610	0.53	-1.0
2,528,873	-		A4249_RS12610	0.53	-0.2
2,529,052	-		A4249_RS12610	0.62	+0.0
2,529,052	-		A4249_RS12610	0.62	-1.0
2,529,151	+		A4249_RS12610	0.66	-0.2
2,529,151	+		A4249_RS12610	0.66	-1.1
2,529,151	+		A4249_RS12610	0.66	+0.8
2,529,151	+		A4249_RS12610	0.66	-0.1
2,529,151	+		A4249_RS12610	0.66	+0.3
2,529,151	+		A4249_RS12610	0.66	+0.3
2,529,151	+		A4249_RS12610	0.66	+0.1
2,529,152	-		A4249_RS12610	0.66	+1.0
2,529,152	-		A4249_RS12610	0.66	-0.2
2,529,152	-		A4249_RS12610	0.66	-1.0
2,529,152	-		A4249_RS12610	0.66	-0.2
2,529,152	-		A4249_RS12610	0.66	-0.1
2,529,205	+		A4249_RS12610	0.69	-0.4
2,529,205	+		A4249_RS12610	0.69	-0.4
2,529,205	+		A4249_RS12610	0.69	-0.5
2,529,205	+		A4249_RS12610	0.69	-0.9
2,529,243	+		A4249_RS12610	0.70	-0.3
2,529,243	+		A4249_RS12610	0.70	-0.9
2,529,244	-		A4249_RS12610	0.70	+1.1
2,529,244	-		A4249_RS12610	0.70	+0.5
2,529,244	-		A4249_RS12610	0.70	+0.4
2,529,265	+		A4249_RS12610	0.71	-0.3
2,529,358	+		A4249_RS12610	0.76	-1.2
2,529,358	+		A4249_RS12610	0.76	+0.8
2,529,358	+		A4249_RS12610	0.76	-0.4
2,529,359	-		A4249_RS12610	0.76	-0.9
2,529,359	-		A4249_RS12610	0.76	-2.3
2,529,400	+		A4249_RS12610	0.77	+0.4
2,529,400	+		A4249_RS12610	0.77	-0.4
2,529,400	+		A4249_RS12610	0.77	+0.1
2,529,400	+		A4249_RS12610	0.77	-0.8
2,529,400	+		A4249_RS12610	0.77	-0.1
2,529,400	+		A4249_RS12610	0.77	-1.2
2,529,400	+		A4249_RS12610	0.77	+0.1
2,529,400	+		A4249_RS12610	0.77	+0.3
2,529,400	+		A4249_RS12610	0.77	-0.3
2,529,401	-		A4249_RS12610	0.77	-0.1
2,529,401	-		A4249_RS12610	0.77	-0.0
2,529,401	-		A4249_RS12610	0.77	+1.1
2,529,401	-		A4249_RS12610	0.77	-0.2
2,529,401	-		A4249_RS12610	0.77	-0.1
2,529,401	-		A4249_RS12610	0.77	-0.2
2,529,401	-		A4249_RS12610	0.77	-1.0
2,529,401	-		A4249_RS12610	0.77	-0.1
2,529,481	+		A4249_RS12610	0.81	-0.2
2,529,481	+		A4249_RS12610	0.81	-0.2
2,529,481	+		A4249_RS12610	0.81	+0.9
2,529,481	+		A4249_RS12610	0.81	+0.4
2,529,482	-		A4249_RS12610	0.81	+0.5
2,529,482	-		A4249_RS12610	0.81	-0.6
2,529,482	-		A4249_RS12610	0.81	+0.4
2,529,482	-		A4249_RS12610	0.81	-0.0
2,529,482	-		A4249_RS12610	0.81	+0.2
2,529,487	+		A4249_RS12610	0.81	+0.1
2,529,487	+		A4249_RS12610	0.81	+0.1
2,529,487	+		A4249_RS12610	0.81	-0.3
2,529,488	-		A4249_RS12610	0.81	-0.2
2,529,614	-		A4249_RS12610	0.87	-0.6
2,529,796	+				+0.0
2,529,796	+				-0.3
2,529,796	+				-0.0
2,529,797	-				+0.9
2,529,797	-				-0.3
2,529,797	-				+0.3
2,529,797	-				-0.8
2,529,797	-				-0.6
2,529,859	+				+0.1
2,529,859	+				-0.0
2,529,859	+				-0.3
2,529,859	+				+0.1
2,530,101	-				-0.1
2,530,233	+				+0.0
2,530,469	+		A4249_RS12615	0.16	-0.1
2,530,470	-		A4249_RS12615	0.16	+0.9
2,530,470	-		A4249_RS12615	0.16	-0.3
2,530,470	-		A4249_RS12615	0.16	-2.5
2,530,557	-		A4249_RS12615	0.24	+0.0
2,530,694	+		A4249_RS12615	0.36	+0.9
2,530,694	+		A4249_RS12615	0.36	-1.1
2,530,695	-		A4249_RS12615	0.36	+0.6
2,530,695	-		A4249_RS12615	0.36	+0.9
2,530,695	-		A4249_RS12615	0.36	-1.4
2,530,740	-		A4249_RS12615	0.41	-0.6