Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12525

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,510,640	+		A4249_RS12515	0.77	-0.2
2,510,640	+		A4249_RS12515	0.77	+0.7
2,510,640	+		A4249_RS12515	0.77	-0.1
2,510,641	-		A4249_RS12515	0.77	-1.2
2,510,641	-		A4249_RS12515	0.77	+0.2
2,510,748	+		A4249_RS12515	0.88	-0.4
2,510,748	+		A4249_RS12515	0.88	-1.3
2,510,748	+		A4249_RS12515	0.88	-0.6
2,510,749	-		A4249_RS12515	0.88	+0.2
2,510,749	-		A4249_RS12515	0.88	+1.6
2,510,749	-		A4249_RS12515	0.88	+0.1
2,510,800	+				-0.8
2,510,800	+				+0.1
2,510,841	+				-1.5
2,510,841	+				+0.3
2,510,842	-				-0.7
2,510,842	-				-0.4
2,510,842	-				+0.7
2,510,842	-				-1.0
2,510,842	-				+0.1
2,510,842	-				-1.1
2,510,842	-				+0.4
2,510,842	-				-0.3
2,510,890	+				+0.4
2,510,890	+				+0.8
2,510,890	+				+0.3
2,510,890	+				+0.3
2,510,891	-				-0.6
2,510,910	+				-0.8
2,510,910	+				-0.6
2,510,910	+				-0.6
2,510,910	+				-0.0
2,510,910	+				+0.3
2,510,911	-				+0.2
2,510,911	-				-0.1
2,510,911	-				-0.3
2,510,911	-				+0.2
2,510,967	+				-0.1
2,510,967	+				-0.5
2,510,967	+				+0.7
2,510,991	+				+0.1
2,510,991	+				-0.3
2,510,991	+				-1.1
2,510,992	-				-0.3
2,511,092	+				+1.6
2,511,092	+				-0.1
2,511,092	+				+0.3
2,511,092	+				-0.7
2,511,092	+				+0.9
2,511,093	-				+0.0
2,511,093	-				-0.1
2,511,093	-				+0.2
2,511,093	-				-0.4
2,511,093	-				+0.3
2,511,159	+		A4249_RS12520	0.29	+0.2
2,511,159	+		A4249_RS12520	0.29	-0.2
2,511,159	+		A4249_RS12520	0.29	+0.4
2,511,242	+		A4249_RS12520	0.58	+0.2
2,511,242	+		A4249_RS12520	0.58	+0.1
2,511,242	+		A4249_RS12520	0.58	-2.2
2,511,242	+		A4249_RS12520	0.58	+0.2
2,511,278	+		A4249_RS12520	0.70	-0.4
2,511,278	+		A4249_RS12520	0.70	+0.2
2,511,278	+		A4249_RS12520	0.70	-0.0
2,511,279	-		A4249_RS12520	0.71	-0.3
2,511,279	-		A4249_RS12520	0.71	-0.1
2,511,279	-		A4249_RS12520	0.71	-0.1
2,511,279	-		A4249_RS12520	0.71	+0.5
2,511,279	-		A4249_RS12520	0.71	+0.6
2,511,330	+		A4249_RS12520	0.89	-0.1
2,511,330	+		A4249_RS12520	0.89	+0.5
2,511,331	-		A4249_RS12520	0.89	-2.0
2,511,406	+				-0.2
2,511,406	+				-0.9
2,511,406	+				-0.6
2,511,406	+				+0.2
2,511,406	+				+0.8
2,511,406	+				+1.0
2,511,406	+				-1.6
2,511,407	-				-1.3
2,511,407	-				-0.6
2,511,407	-				-1.6
2,511,407	-				-0.3
2,511,407	-				+1.5
2,511,407	-				+0.3
2,511,407	-				+0.3
2,511,407	-				+0.5
2,511,408	+				+0.5
2,511,408	+				-0.3
2,511,408	+				-1.3
2,511,408	+				+0.3
2,511,408	+				+0.0
2,511,408	+				+0.2
2,511,408	+				-0.2
2,511,408	+				-0.2
2,511,408	+				+0.7
2,511,409	-				-0.7
2,511,409	-				-0.1
2,511,409	-				+0.5
2,511,409	-				+0.4
2,511,409	-				-0.1
2,511,409	-				+0.2
2,511,409	-				-0.8
2,511,409	-				-0.1
2,511,409	-				-0.2
2,511,409	-				-1.0
2,511,409	-				+0.2
2,511,409	-				+0.2
2,511,412	+				-0.2
2,511,412	+				-0.1
2,511,412	+				+0.4
2,511,412	+				-1.1
2,511,412	+				+0.7
2,511,412	+				-0.3
2,511,412	+				+0.1
2,511,412	+				+0.8
2,511,412	+				-0.2
2,511,413	-				-0.4
2,511,413	-				+0.3
2,511,413	-				+0.1
2,511,413	-				-0.3
2,511,633	+				-1.0
2,511,633	+				+0.9
2,511,634	-				+0.2
2,511,634	-				-0.2
2,511,672	+				-0.5
2,511,672	+				-1.1
2,511,672	+				+0.6
2,511,672	+				+0.2
2,511,672	+				+0.4
2,511,672	+				-1.6
2,511,672	+				+0.2
2,511,672	+				+1.0
2,511,672	+				-0.3
2,511,672	+				-0.9
2,511,673	-				-0.2
2,511,673	-				+0.5
2,511,673	-				+0.7
2,511,673	-				-0.4
2,511,673	-				+0.1
2,511,673	-				-1.7
2,511,673	-				-0.6
2,511,673	-				-0.0
2,511,673	-				-0.2
2,511,673	-				-0.4
2,511,673	-				+0.5
2,511,678	+				-1.4
2,511,678	+				+0.8
2,511,678	+				-0.6
2,511,678	+				+0.5
2,511,678	+				-0.0
2,511,678	+				+0.0
2,511,679	-				+0.4
2,511,679	-				+0.3
2,511,679	-				-0.6
2,511,679	-				-1.4
2,511,679	-				+0.3
2,511,682	-				+0.2
2,511,682	-				-0.7
2,511,693	+		A4249_RS12525	0.10	-1.1
2,511,693	+		A4249_RS12525	0.10	-1.2
2,511,797	+		A4249_RS12525	0.15	-0.9
2,511,858	+		A4249_RS12525	0.18	-0.3
2,511,858	+		A4249_RS12525	0.18	+0.7
2,511,858	+		A4249_RS12525	0.18	-0.7
2,511,858	+		A4249_RS12525	0.18	+0.2
2,511,858	+		A4249_RS12525	0.18	+0.0
2,511,858	+		A4249_RS12525	0.18	-0.5
2,511,858	+		A4249_RS12525	0.18	+0.4
2,511,858	+		A4249_RS12525	0.18	+0.3
2,511,858	+		A4249_RS12525	0.18	-0.1
2,511,859	-		A4249_RS12525	0.18	+0.2
2,511,859	-		A4249_RS12525	0.18	-0.2
2,511,859	-		A4249_RS12525	0.18	+1.6
2,511,859	-		A4249_RS12525	0.18	+0.1
2,511,859	-		A4249_RS12525	0.18	-0.1
2,511,859	-		A4249_RS12525	0.18	-0.9
2,511,859	-		A4249_RS12525	0.18	+0.6
2,511,859	-		A4249_RS12525	0.18	+0.2
2,511,859	-		A4249_RS12525	0.18	+1.4
2,511,859	-		A4249_RS12525	0.18	+0.5
2,511,873	+		A4249_RS12525	0.19	+1.2
2,511,944	-		A4249_RS12525	0.22	-0.4
2,511,946	-		A4249_RS12525	0.22	-0.8
2,511,946	-		A4249_RS12525	0.22	+0.2
2,511,957	+		A4249_RS12525	0.23	+0.0
2,511,957	+		A4249_RS12525	0.23	+0.8
2,511,958	-		A4249_RS12525	0.23	-0.2
2,511,958	-		A4249_RS12525	0.23	+0.4
2,511,958	-		A4249_RS12525	0.23	-0.1
2,511,958	-		A4249_RS12525	0.23	-1.6
2,511,958	-		A4249_RS12525	0.23	-0.3
2,512,033	+		A4249_RS12525	0.26	-0.4
2,512,034	-		A4249_RS12525	0.26	-1.0
2,512,034	-		A4249_RS12525	0.26	-0.1
2,512,042	-		A4249_RS12525	0.26	+0.5
2,512,050	+		A4249_RS12525	0.27	-0.6
2,512,051	-		A4249_RS12525	0.27	+0.6
2,512,071	+		A4249_RS12525	0.28	+0.1
2,512,071	+		A4249_RS12525	0.28	+0.2
2,512,071	+		A4249_RS12525	0.28	-0.9
2,512,071	+		A4249_RS12525	0.28	+0.9
2,512,071	+		A4249_RS12525	0.28	-0.2
2,512,071	+		A4249_RS12525	0.28	-0.0
2,512,071	+		A4249_RS12525	0.28	+0.2
2,512,071	+		A4249_RS12525	0.28	-0.6
2,512,071	+		A4249_RS12525	0.28	+0.8
2,512,072	-		A4249_RS12525	0.28	-0.1
2,512,072	-		A4249_RS12525	0.28	+0.7
2,512,072	-		A4249_RS12525	0.28	+0.0
2,512,072	-		A4249_RS12525	0.28	-0.2
2,512,072	-		A4249_RS12525	0.28	+0.8
2,512,072	-		A4249_RS12525	0.28	-1.7
2,512,218	+		A4249_RS12525	0.34	-1.0
2,512,218	+		A4249_RS12525	0.34	-0.2
2,512,219	-		A4249_RS12525	0.35	-0.8
2,512,219	-		A4249_RS12525	0.35	-0.2
2,512,260	+		A4249_RS12525	0.36	-1.1
2,512,260	+		A4249_RS12525	0.36	-0.7
2,512,260	+		A4249_RS12525	0.36	+0.0
2,512,260	+		A4249_RS12525	0.36	-0.3
2,512,261	-		A4249_RS12525	0.36	-1.1
2,512,272	+		A4249_RS12525	0.37	-1.0
2,512,272	+		A4249_RS12525	0.37	-0.1
2,512,272	+		A4249_RS12525	0.37	-0.1
2,512,272	+		A4249_RS12525	0.37	+0.5
2,512,272	+		A4249_RS12525	0.37	+0.7
2,512,273	-		A4249_RS12525	0.37	-0.8
2,512,275	+		A4249_RS12525	0.37	-0.0
2,512,275	+		A4249_RS12525	0.37	-0.2
2,512,275	+		A4249_RS12525	0.37	+0.5
2,512,275	+		A4249_RS12525	0.37	+1.2
2,512,275	+		A4249_RS12525	0.37	-1.2
2,512,275	+		A4249_RS12525	0.37	+0.7
2,512,275	+		A4249_RS12525	0.37	-0.7
2,512,276	-		A4249_RS12525	0.37	-0.2
2,512,276	-		A4249_RS12525	0.37	+0.1
2,512,276	-		A4249_RS12525	0.37	-0.3
2,512,276	-		A4249_RS12525	0.37	-0.2
2,512,276	-		A4249_RS12525	0.37	-0.2
2,512,276	-		A4249_RS12525	0.37	+0.3
2,512,276	-		A4249_RS12525	0.37	-0.1
2,512,276	-		A4249_RS12525	0.37	+0.2
2,512,276	-		A4249_RS12525	0.37	-0.0
2,512,276	-		A4249_RS12525	0.37	-0.2
2,512,311	+		A4249_RS12525	0.39	-1.0
2,512,311	+		A4249_RS12525	0.39	-0.6
2,512,311	+		A4249_RS12525	0.39	+0.3
2,512,312	-		A4249_RS12525	0.39	-0.5
2,512,312	-		A4249_RS12525	0.39	+0.3
2,512,312	-		A4249_RS12525	0.39	-1.4
2,512,312	-		A4249_RS12525	0.39	-0.1
2,512,312	-		A4249_RS12525	0.39	-0.1
2,512,312	-		A4249_RS12525	0.39	-0.5
2,512,320	+		A4249_RS12525	0.39	+0.1
2,512,320	+		A4249_RS12525	0.39	-0.1
2,512,320	+		A4249_RS12525	0.39	+0.3
2,512,321	-		A4249_RS12525	0.39	+0.1
2,512,321	-		A4249_RS12525	0.39	+0.0
2,512,321	-		A4249_RS12525	0.39	+1.0
2,512,321	-		A4249_RS12525	0.39	+0.2
2,512,386	+		A4249_RS12525	0.42	-0.7
2,512,386	+		A4249_RS12525	0.42	-1.6
2,512,387	-		A4249_RS12525	0.42	-0.1
2,512,387	-		A4249_RS12525	0.42	+0.7
2,512,387	-		A4249_RS12525	0.42	-0.1
2,512,440	+		A4249_RS12525	0.45	+0.4
2,512,440	+		A4249_RS12525	0.45	-1.4
2,512,441	-		A4249_RS12525	0.45	-0.9
2,512,441	-		A4249_RS12525	0.45	+0.0
2,512,441	-		A4249_RS12525	0.45	+0.1
2,512,470	+		A4249_RS12525	0.46	+1.2
2,512,470	+		A4249_RS12525	0.46	-0.4
2,512,470	+		A4249_RS12525	0.46	-0.4
2,512,470	+		A4249_RS12525	0.46	+0.6
2,512,471	-		A4249_RS12525	0.46	+0.1
2,512,471	-		A4249_RS12525	0.46	+0.0
2,512,471	-		A4249_RS12525	0.46	-0.6
2,512,471	-		A4249_RS12525	0.46	-0.0
2,512,471	-		A4249_RS12525	0.46	-0.6
2,512,471	-		A4249_RS12525	0.46	-0.1
2,512,480	+		A4249_RS12525	0.46	-0.2
2,512,480	+		A4249_RS12525	0.46	+0.1
2,512,500	+		A4249_RS12525	0.47	+0.8
2,512,500	+		A4249_RS12525	0.47	-0.8
2,512,500	+		A4249_RS12525	0.47	-0.7
2,512,500	+		A4249_RS12525	0.47	-0.1
2,512,501	-		A4249_RS12525	0.47	-0.1
2,512,501	-		A4249_RS12525	0.47	-1.1
2,512,501	-		A4249_RS12525	0.47	+0.1
2,512,501	-		A4249_RS12525	0.47	-1.9
2,512,506	+		A4249_RS12525	0.48	+0.2
2,512,506	+		A4249_RS12525	0.48	-0.1
2,512,506	+		A4249_RS12525	0.48	-0.5
2,512,507	-		A4249_RS12525	0.48	-0.4
2,512,507	-		A4249_RS12525	0.48	-0.9
2,513,232	+		A4249_RS12525	0.81	-0.7
2,513,232	+		A4249_RS12525	0.81	+0.4
2,513,232	+		A4249_RS12525	0.81	+1.6
2,513,232	+		A4249_RS12525	0.81	-0.2
2,513,232	+		A4249_RS12525	0.81	-0.3
2,513,232	+		A4249_RS12525	0.81	-0.6
2,513,233	-		A4249_RS12525	0.81	+0.4
2,513,233	-		A4249_RS12525	0.81	-0.2
2,513,268	+		A4249_RS12525	0.82	-0.6
2,513,268	+		A4249_RS12525	0.82	-0.7
2,513,268	+		A4249_RS12525	0.82	-0.6
2,513,268	+		A4249_RS12525	0.82	+1.3
2,513,269	-		A4249_RS12525	0.83	+1.3
2,513,269	-		A4249_RS12525	0.83	+0.3
2,513,369	-		A4249_RS12525	0.87	+0.1
2,513,454	+				+0.0
2,513,454	+				+1.2
2,513,454	+				-0.8
2,513,454	+				-0.3
2,513,454	+				-1.6
2,513,454	+				+0.0
2,513,455	-				-0.3
2,513,455	-				-0.2
2,513,455	-				+0.5
2,513,455	-				+0.5
2,513,644	+				+0.9
2,513,644	+				+1.5
2,513,645	-				-2.2
2,513,645	-				-0.5
2,513,645	-				+0.4
2,513,645	-				-0.1
2,513,645	-				-0.2
2,513,645	-				+0.3
2,513,682	+				+0.0
2,513,682	+				+0.0
2,513,683	-				-0.6
2,513,683	-				-0.4
2,513,688	+				-0.3
2,513,688	+				-0.2
2,513,688	+				+1.8
2,513,689	-				-0.4
2,513,689	-				-0.3
2,513,689	-				-0.4
2,513,689	-				-0.8
2,514,635	+				-0.6
2,514,635	+				+0.3
2,514,635	+				-0.6
2,514,635	+				-0.6
2,514,636	-				+0.5
2,514,636	-				-1.2