Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11670

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,341,490	-		A4249_RS11665	0.41	-1.1
2,341,673	+		A4249_RS11665	0.54	-0.1
2,341,673	+		A4249_RS11665	0.54	+0.4
2,341,674	-		A4249_RS11665	0.54	+0.8
2,341,819	+		A4249_RS11665	0.65	+0.6
2,341,819	+		A4249_RS11665	0.65	+0.1
2,341,820	-		A4249_RS11665	0.65	-0.0
2,341,820	-		A4249_RS11665	0.65	+0.1
2,341,820	-		A4249_RS11665	0.65	+0.1
2,341,820	-		A4249_RS11665	0.65	+0.3
2,341,820	-		A4249_RS11665	0.65	-0.1
2,341,820	-		A4249_RS11665	0.65	+0.8
2,341,892	+		A4249_RS11665	0.70	-0.2
2,341,892	+		A4249_RS11665	0.70	-0.0
2,341,892	+		A4249_RS11665	0.70	+0.5
2,341,893	-		A4249_RS11665	0.70	-0.0
2,341,952	+		A4249_RS11665	0.75	-1.1
2,341,952	+		A4249_RS11665	0.75	-0.1
2,341,953	-		A4249_RS11665	0.75	+0.2
2,342,048	-		A4249_RS11665	0.82	-0.8
2,342,075	+		A4249_RS11665	0.84	-0.3
2,342,075	+		A4249_RS11665	0.84	-0.1
2,342,075	+		A4249_RS11665	0.84	+0.5
2,342,076	-		A4249_RS11665	0.84	-0.2
2,342,076	-		A4249_RS11665	0.84	-0.6
2,342,076	-		A4249_RS11665	0.84	+0.3
2,342,330	+				-2.0
2,342,330	+				+0.3
2,342,331	-				-0.1
2,342,331	-				-0.2
2,342,331	-				+0.8
2,342,331	-				-0.5
2,342,331	-				+0.3
2,342,712	+		A4249_RS11670	0.24	+0.6
2,342,712	+		A4249_RS11670	0.24	+0.7
2,342,712	+		A4249_RS11670	0.24	-0.4
2,342,712	+		A4249_RS11670	0.24	-0.6
2,342,713	-		A4249_RS11670	0.24	+0.0
2,342,713	-		A4249_RS11670	0.24	-0.6
2,342,713	-		A4249_RS11670	0.24	+0.1
2,342,713	-		A4249_RS11670	0.24	-0.1
2,342,713	-		A4249_RS11670	0.24	+0.6
2,342,713	-		A4249_RS11670	0.24	-0.0
2,342,713	-		A4249_RS11670	0.24	+0.1
2,342,713	-		A4249_RS11670	0.24	+1.1
2,342,748	+		A4249_RS11670	0.26	-0.0
2,342,748	+		A4249_RS11670	0.26	+0.1
2,342,748	+		A4249_RS11670	0.26	-1.0
2,342,748	+		A4249_RS11670	0.26	+0.5
2,342,748	+		A4249_RS11670	0.26	+0.4
2,342,748	+		A4249_RS11670	0.26	-0.6
2,342,748	+		A4249_RS11670	0.26	-0.2
2,342,748	+		A4249_RS11670	0.26	-1.2
2,342,749	-		A4249_RS11670	0.26	+0.5
2,342,749	-		A4249_RS11670	0.26	-0.2
2,342,749	-		A4249_RS11670	0.26	+0.6
2,342,749	-		A4249_RS11670	0.26	-0.1
2,342,749	-		A4249_RS11670	0.26	+1.3
2,342,822	+		A4249_RS11670	0.31	-1.4
2,342,822	+		A4249_RS11670	0.31	+0.7
2,342,822	+		A4249_RS11670	0.31	+0.5
2,342,823	-		A4249_RS11670	0.31	+0.3
2,342,823	-		A4249_RS11670	0.31	-0.0
2,342,823	-		A4249_RS11670	0.31	+0.0
2,342,891	+		A4249_RS11670	0.36	-1.2
2,342,891	+		A4249_RS11670	0.36	+0.5
2,342,891	+		A4249_RS11670	0.36	+0.2
2,342,891	+		A4249_RS11670	0.36	+0.1
2,342,892	-		A4249_RS11670	0.36	-0.6
2,342,892	-		A4249_RS11670	0.36	-0.1
2,342,892	-		A4249_RS11670	0.36	+0.1
2,342,892	-		A4249_RS11670	0.36	-1.0
2,342,892	-		A4249_RS11670	0.36	+0.0
2,343,062	+		A4249_RS11670	0.47	-0.4
2,343,062	+		A4249_RS11670	0.47	-0.3
2,343,062	+		A4249_RS11670	0.47	+0.4
2,343,063	-		A4249_RS11670	0.47	-0.5
2,343,063	-		A4249_RS11670	0.47	+0.3
2,343,069	+		A4249_RS11670	0.48	+0.7
2,343,069	+		A4249_RS11670	0.48	+0.4
2,343,069	+		A4249_RS11670	0.48	-1.2
2,343,069	+		A4249_RS11670	0.48	+0.1
2,343,069	+		A4249_RS11670	0.48	+0.1
2,343,070	-		A4249_RS11670	0.48	-0.5
2,343,070	-		A4249_RS11670	0.48	-0.1
2,343,070	-		A4249_RS11670	0.48	+1.2
2,343,070	-		A4249_RS11670	0.48	-0.2
2,343,070	-		A4249_RS11670	0.48	+0.8
2,343,070	-		A4249_RS11670	0.48	+0.9
2,343,086	+		A4249_RS11670	0.49	-1.2
2,343,087	-		A4249_RS11670	0.49	-0.6
2,343,351	+		A4249_RS11670	0.67	-0.7
2,343,351	+		A4249_RS11670	0.67	-1.1
2,343,351	+		A4249_RS11670	0.67	+0.1
2,343,351	+		A4249_RS11670	0.67	-0.0
2,343,352	-		A4249_RS11670	0.67	-1.4
2,343,390	+		A4249_RS11670	0.69	-0.2
2,343,390	+		A4249_RS11670	0.69	-1.6
2,343,390	+		A4249_RS11670	0.69	-1.1
2,343,390	+		A4249_RS11670	0.69	-1.0
2,343,391	-		A4249_RS11670	0.69	-0.2
2,343,391	-		A4249_RS11670	0.69	+0.2
2,343,391	-		A4249_RS11670	0.69	-0.4
2,343,391	-		A4249_RS11670	0.69	+0.2
2,343,391	-		A4249_RS11670	0.69	-0.3
2,343,391	-		A4249_RS11670	0.69	-0.3
2,343,391	-		A4249_RS11670	0.69	-0.1
2,343,392	+		A4249_RS11670	0.69	+0.5
2,343,392	+		A4249_RS11670	0.69	+0.5
2,343,392	+		A4249_RS11670	0.69	-0.2
2,343,393	-		A4249_RS11670	0.69	-0.0
2,343,402	+		A4249_RS11670	0.70	-0.7
2,343,402	+		A4249_RS11670	0.70	-0.8
2,343,402	+		A4249_RS11670	0.70	+0.3
2,343,453	+		A4249_RS11670	0.74	-0.9
2,343,453	+		A4249_RS11670	0.74	-0.6
2,343,454	-		A4249_RS11670	0.74	-0.0
2,343,454	-		A4249_RS11670	0.74	-1.0
2,343,482	-		A4249_RS11670	0.75	+0.1
2,343,516	-		A4249_RS11670	0.78	-0.1
2,343,762	+				+0.2
2,343,763	-				+0.4
2,343,763	-				-0.8
2,343,763	-				+0.1
2,343,817	+				-0.4
2,343,817	+				-0.2
2,343,817	+				-0.5
2,343,817	+				-1.2
2,343,817	+				-1.6
2,343,817	+				+0.0
2,343,817	+				-0.1
2,343,817	+				-0.0
2,343,818	-				+0.1
2,343,818	-				-1.4
2,343,818	-				-0.2
2,343,818	-				-0.5
2,343,818	-				-0.2
2,343,933	+				-0.2
2,343,933	+				-0.2
2,343,933	+				+0.0
2,343,933	+				+0.4
2,343,934	-				-0.4
2,343,934	-				-0.9
2,344,121	+				-0.8
2,344,121	+				-0.1
2,344,122	-				+0.6
2,344,169	-				-2.2
2,344,196	+				-0.6
2,344,196	+				+0.4
2,344,196	+				-1.0
2,344,196	+				+0.0
2,344,197	-				-0.8
2,344,197	-				+0.4
2,344,197	-				-0.1
2,344,268	+				+1.1
2,344,269	-				+0.2
2,344,269	-				-0.2
2,344,269	-				-0.0
2,344,384	+				-0.2
2,344,384	+				-0.0
2,344,384	+				-0.3
2,344,384	+				+0.8
2,344,384	+				+0.3
2,344,385	-				+0.0
2,344,385	-				-0.3
2,344,385	-				+0.2
2,344,432	-		A4249_RS11675	0.19	-0.5
2,344,432	-		A4249_RS11675	0.19	-0.1
2,344,432	-		A4249_RS11675	0.19	+1.1
2,344,432	-		A4249_RS11675	0.19	-0.0
2,344,665	+				-1.4
2,344,665	+				-0.5
2,344,665	+				-0.2
2,344,665	+				-0.3
2,344,665	+				+0.2
2,344,665	+				-0.1
2,344,665	+				-0.4
2,344,665	+				-0.1
2,344,666	-				-0.6
2,344,666	-				+0.7
2,344,679	+				-0.7
2,344,679	+				-0.2
2,344,679	+				-0.6
2,344,680	-				+0.1
2,344,680	-				+0.0
2,344,692	+				-1.2
2,344,693	-				-0.4
2,344,693	-				-0.8
2,344,693	-				-1.0
2,344,693	-				+0.4
2,344,733	+				-0.2
2,344,734	-				-0.1
2,344,768	+				+0.2
2,344,768	+				-0.4
2,344,768	+				+0.5
2,344,768	+				-0.0
2,344,769	-				-0.4
2,344,769	-				-0.1
2,344,769	-				+0.3
2,344,776	+				+0.9
2,344,776	+				+0.2
2,344,776	+				-0.1
2,344,776	+				-0.3
2,344,777	-				-0.7
2,344,777	-				+0.5
2,344,777	-				+0.0
2,344,777	-				-0.1
2,344,777	-				-0.1
2,344,777	-				-1.1
2,344,777	-				+0.0
2,344,777	-				-0.6
2,344,777	-				+0.6
2,344,778	+				-0.7
2,344,778	+				-0.1
2,344,779	-				+1.2
2,344,827	+				+0.4