Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10470

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
2,105,687	+				-0.6
2,105,687	+				-0.1
2,105,688	-				-0.1
2,105,688	-				-1.0
2,105,688	-				-0.5
2,105,833	+				+0.2
2,105,846	+				+0.6
2,105,846	+				-0.1
2,105,846	+				-1.0
2,105,846	+				+0.6
2,105,846	+				-0.7
2,105,846	+				-1.2
2,105,846	+				-0.2
2,105,847	-				+0.1
2,105,847	-				+0.3
2,105,847	-				+0.2
2,105,847	-				+0.6
2,105,847	-				+0.2
2,105,848	+				-1.5
2,105,848	+				-0.2
2,105,848	+				-0.4
2,105,848	+				-0.6
2,105,848	+				-0.4
2,105,848	+				-0.2
2,105,849	-				-0.4
2,105,849	-				-0.5
2,105,849	-				+1.0
2,105,849	-				-0.5
2,105,849	-				-0.0
2,105,849	-				-0.1
2,105,849	-				-0.5
2,105,849	-				-0.4
2,105,849	-				-1.3
2,105,849	-				-0.9
2,105,849	-				-0.0
2,105,849	-				+0.1
2,105,904	-				+0.4
2,105,958	-				+0.3
2,105,958	-				+0.1
2,105,958	-				-0.7
2,105,958	-				+0.6
2,105,958	-				-0.2
2,105,958	-				-1.5
2,105,958	-				-1.0
2,105,958	-				+0.0
2,106,058	-				+1.2
2,106,123	+		A4249_RS10465	0.18	-1.8
2,106,123	+		A4249_RS10465	0.18	+0.7
2,106,123	+		A4249_RS10465	0.18	+0.5
2,106,123	+		A4249_RS10465	0.18	-0.2
2,106,123	+		A4249_RS10465	0.18	-0.5
2,106,123	+		A4249_RS10465	0.18	-0.4
2,106,124	-		A4249_RS10465	0.18	-0.6
2,106,124	-		A4249_RS10465	0.18	-0.1
2,106,124	-		A4249_RS10465	0.18	-0.1
2,106,147	+		A4249_RS10465	0.23	-0.1
2,106,147	+		A4249_RS10465	0.23	-0.2
2,106,148	-		A4249_RS10465	0.23	+0.1
2,106,148	-		A4249_RS10465	0.23	-0.8
2,106,148	-		A4249_RS10465	0.23	+0.1
2,106,148	-		A4249_RS10465	0.23	-0.1
2,106,149	+		A4249_RS10465	0.23	-0.5
2,106,149	+		A4249_RS10465	0.23	+0.3
2,106,149	+		A4249_RS10465	0.23	-0.4
2,106,149	+		A4249_RS10465	0.23	-0.0
2,106,149	+		A4249_RS10465	0.23	+1.5
2,106,150	-		A4249_RS10465	0.23	-0.6
2,106,150	-		A4249_RS10465	0.23	+0.4
2,106,150	-		A4249_RS10465	0.23	-0.7
2,106,150	-		A4249_RS10465	0.23	-1.8
2,106,296	-		A4249_RS10465	0.52	-1.0
2,106,296	-		A4249_RS10465	0.52	+0.3
2,106,296	-		A4249_RS10465	0.52	+0.2
2,106,340	+		A4249_RS10465	0.61	-0.4
2,106,340	+		A4249_RS10465	0.61	-0.3
2,106,340	+		A4249_RS10465	0.61	+0.4
2,106,340	+		A4249_RS10465	0.61	-0.7
2,106,340	+		A4249_RS10465	0.61	+0.5
2,106,340	+		A4249_RS10465	0.61	-0.3
2,106,341	-		A4249_RS10465	0.61	+0.9
2,106,341	-		A4249_RS10465	0.61	-0.3
2,106,341	-		A4249_RS10465	0.61	-0.0
2,106,341	-		A4249_RS10465	0.61	-0.1
2,106,341	-		A4249_RS10465	0.61	-1.5
2,106,341	-		A4249_RS10465	0.61	-0.3
2,106,341	-		A4249_RS10465	0.61	-0.5
2,106,381	+		A4249_RS10465	0.69	-1.2
2,106,381	+		A4249_RS10465	0.69	+1.0
2,106,381	+		A4249_RS10465	0.69	-1.6
2,106,381	+		A4249_RS10465	0.69	+0.2
2,106,381	+		A4249_RS10465	0.69	-0.3
2,106,382	-		A4249_RS10465	0.70	+0.0
2,106,531	+				-0.0
2,106,532	-				+0.1
2,106,532	-				-0.0
2,106,532	-				+0.2
2,106,555	+				-1.1
2,106,555	+				-0.2
2,106,555	+				+0.0
2,106,556	-				-0.3
2,106,556	-				+0.9
2,106,556	-				-0.8
2,106,556	-				+0.2
2,106,556	-				-0.1
2,106,556	-				+0.1
2,106,559	+				-0.3
2,106,559	+				-1.1
2,106,559	+				+0.1
2,106,559	+				-0.6
2,106,559	+				-0.0
2,106,559	+				+1.6
2,106,559	+				-0.4
2,106,559	+				-1.0
2,106,559	+				+0.7
2,106,559	+				+0.5
2,106,559	+				-1.8
2,106,559	+				+0.0
2,106,560	-				+0.3
2,106,560	-				-1.4
2,106,560	-				+0.3
2,106,560	-				-0.2
2,106,560	-				-0.3
2,106,560	-				-0.2
2,106,560	-				+0.7
2,106,560	-				+0.8
2,106,560	-				+0.1
2,106,560	-				-0.4
2,106,560	-				-0.6
2,106,560	-				+0.4
2,106,560	-				+0.1
2,106,564	+				+0.1
2,106,564	+				+0.6
2,106,564	+				+0.1
2,106,565	-				-0.1
2,106,565	-				-0.4
2,106,618	-				-0.8
2,106,618	-				-0.2
2,106,618	-				+0.3
2,106,618	-				-0.6
2,107,260	-		A4249_RS10470	0.54	-0.3
2,107,260	-		A4249_RS10470	0.54	+0.4
2,107,260	-		A4249_RS10470	0.54	-0.1
2,107,289	+		A4249_RS10470	0.56	-0.7
2,107,289	+		A4249_RS10470	0.56	-0.3
2,107,289	+		A4249_RS10470	0.56	+0.5
2,107,289	+		A4249_RS10470	0.56	+0.7
2,107,290	-		A4249_RS10470	0.56	-1.0
2,107,290	-		A4249_RS10470	0.56	-1.8
2,107,340	+		A4249_RS10470	0.60	+0.0
2,107,340	+		A4249_RS10470	0.60	+0.3
2,107,340	+		A4249_RS10470	0.60	-1.1
2,107,340	+		A4249_RS10470	0.60	-0.6
2,107,341	-		A4249_RS10470	0.61	+2.0
2,107,364	+		A4249_RS10470	0.62	-0.4
2,107,364	+		A4249_RS10470	0.62	-0.5
2,107,364	+		A4249_RS10470	0.62	+1.0
2,107,364	+		A4249_RS10470	0.62	-0.3
2,107,364	+		A4249_RS10470	0.62	-1.0
2,107,364	+		A4249_RS10470	0.62	-0.5
2,107,364	+		A4249_RS10470	0.62	+0.8
2,107,365	-		A4249_RS10470	0.63	-0.8
2,107,365	-		A4249_RS10470	0.63	-0.2
2,107,365	-		A4249_RS10470	0.63	-0.5
2,107,365	-		A4249_RS10470	0.63	+1.3
2,107,365	-		A4249_RS10470	0.63	+0.3
2,107,365	-		A4249_RS10470	0.63	-0.5
2,107,365	-		A4249_RS10470	0.63	-0.5
2,107,365	-		A4249_RS10470	0.63	+1.0
2,107,365	-		A4249_RS10470	0.63	+0.8
2,107,427	+		A4249_RS10470	0.68	+0.0
2,107,427	+		A4249_RS10470	0.68	+0.3
2,107,428	-		A4249_RS10470	0.68	+0.3
2,107,769	+				-0.5
2,107,769	+				+0.1
2,107,769	+				+0.2
2,107,769	+				-1.2
2,107,769	+				-0.8
2,107,828	+				+0.9
2,107,828	+				-0.1
2,107,828	+				-0.2
2,107,829	-				+0.6
2,107,829	-				-0.5
2,107,844	+				-0.8
2,107,844	+				-0.2
2,107,844	+				+0.0
2,107,844	+				-0.2
2,107,844	+				+0.3
2,107,844	+				-0.9
2,107,844	+				-0.4
2,107,845	-				-1.4
2,107,845	-				+0.2
2,107,845	-				-1.0
2,107,845	-				+0.3
2,107,882	+				-0.2
2,107,883	-				-1.5
2,107,883	-				-0.0
2,107,897	+				+0.4
2,107,897	+				-1.5
2,107,898	-				-0.0
2,108,347	+		A4249_RS16950	0.48	-0.4
2,108,347	+		A4249_RS16950	0.48	+0.2
2,108,348	-		A4249_RS16950	0.48	+0.6
2,108,348	-		A4249_RS16950	0.48	-0.1
2,108,348	-		A4249_RS16950	0.48	+0.3
2,108,657	+		A4249_RS16950	0.78	-0.5
2,108,805	+				-0.6
2,108,806	-				-0.4