Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08410

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,686,481	+		A4249_RS08400	0.66	+0.1
1,686,481	+		A4249_RS08400	0.66	-0.6
1,686,481	+		A4249_RS08400	0.66	-0.3
1,686,482	-		A4249_RS08400	0.66	-0.2
1,686,482	-		A4249_RS08400	0.66	+0.4
1,686,514	+		A4249_RS08400	0.73	+0.4
1,686,514	+		A4249_RS08400	0.73	-1.0
1,686,515	-		A4249_RS08400	0.73	-0.2
1,686,515	-		A4249_RS08400	0.73	+0.8
1,686,515	-		A4249_RS08400	0.73	+0.8
1,686,619	+				-0.9
1,686,620	-				-1.3
1,686,706	-				+0.0
1,686,820	-		A4249_RS08405	0.24	-0.2
1,686,820	-		A4249_RS08405	0.24	+0.7
1,686,820	-		A4249_RS08405	0.24	-0.5
1,686,820	-		A4249_RS08405	0.24	-1.2
1,686,820	-		A4249_RS08405	0.24	+0.4
1,687,210	+				-0.7
1,687,211	-				+0.1
1,687,245	+				+1.1
1,687,245	+				-0.5
1,687,246	-				+0.2
1,687,246	-				-0.4
1,687,324	+				-0.1
1,687,401	+				+0.5
1,687,401	+				-0.3
1,687,401	+				+0.2
1,687,402	-				-0.1
1,687,402	-				-0.3
1,687,402	-				+0.2
1,687,402	-				+0.3
1,687,402	-				-0.2
1,687,406	+				-0.5
1,687,406	+				-1.0
1,687,406	+				-0.1
1,687,407	-				-0.5
1,687,565	-				-0.3
1,687,657	+		A4249_RS08410	0.12	-0.0
1,687,690	+		A4249_RS08410	0.15	-0.1
1,687,690	+		A4249_RS08410	0.15	-0.1
1,687,690	+		A4249_RS08410	0.15	-0.1
1,687,690	+		A4249_RS08410	0.15	-0.1
1,687,690	+		A4249_RS08410	0.15	-0.1
1,687,691	-		A4249_RS08410	0.15	-0.0
1,687,691	-		A4249_RS08410	0.15	+0.1
1,687,691	-		A4249_RS08410	0.15	-0.2
1,687,691	-		A4249_RS08410	0.15	-0.0
1,687,691	-		A4249_RS08410	0.15	-0.0
1,687,691	-		A4249_RS08410	0.15	-0.2
1,687,691	-		A4249_RS08410	0.15	-0.2
1,687,691	-		A4249_RS08410	0.15	+0.0
1,687,691	-		A4249_RS08410	0.15	-0.1
1,687,691	-		A4249_RS08410	0.15	-0.1
1,687,691	-		A4249_RS08410	0.15	+0.2
1,687,691	-		A4249_RS08410	0.15	-0.3
1,687,691	-		A4249_RS08410	0.15	-0.1
1,687,691	-		A4249_RS08410	0.15	-0.2
1,687,691	-		A4249_RS08410	0.15	-0.0
1,687,911	+		A4249_RS08410	0.30	-0.1
1,687,911	+		A4249_RS08410	0.30	-0.0
1,687,911	+		A4249_RS08410	0.30	-0.0
1,687,911	+		A4249_RS08410	0.30	-0.2
1,687,911	+		A4249_RS08410	0.30	-0.1
1,687,911	+		A4249_RS08410	0.30	-0.1
1,687,912	-		A4249_RS08410	0.30	-0.1
1,687,912	-		A4249_RS08410	0.30	+0.1
1,687,912	-		A4249_RS08410	0.30	-0.0
1,687,912	-		A4249_RS08410	0.30	+0.1
1,687,912	-		A4249_RS08410	0.30	-0.1
1,687,912	-		A4249_RS08410	0.30	+0.0
1,687,912	-		A4249_RS08410	0.30	-0.1
1,687,912	-		A4249_RS08410	0.30	-0.1
1,687,958	-		A4249_RS08410	0.33	+0.0
1,687,960	+		A4249_RS08410	0.33	+0.1
1,687,961	-		A4249_RS08410	0.33	-0.3
1,687,961	-		A4249_RS08410	0.33	-0.2
1,687,961	-		A4249_RS08410	0.33	-0.2
1,687,961	-		A4249_RS08410	0.33	-0.0
1,688,053	+		A4249_RS08410	0.39	+0.0
1,688,054	-		A4249_RS08410	0.39	-0.2
1,688,054	-		A4249_RS08410	0.39	-0.2
1,688,056	+		A4249_RS08410	0.39	-0.2
1,688,056	+		A4249_RS08410	0.39	-0.3
1,688,056	+		A4249_RS08410	0.39	-0.2
1,688,057	-		A4249_RS08410	0.39	-0.0
1,688,063	-		A4249_RS08410	0.40	-0.1
1,688,140	+		A4249_RS08410	0.45	-0.2
1,688,161	+		A4249_RS08410	0.46	-0.2
1,688,179	+		A4249_RS08410	0.47	-0.0
1,688,179	+		A4249_RS08410	0.47	-0.3
1,688,180	-		A4249_RS08410	0.48	-0.2
1,688,180	-		A4249_RS08410	0.48	-0.1
1,688,180	-		A4249_RS08410	0.48	-0.3
1,688,180	-		A4249_RS08410	0.48	-0.3
1,688,180	-		A4249_RS08410	0.48	-0.2
1,688,180	-		A4249_RS08410	0.48	-0.3
1,688,180	-		A4249_RS08410	0.48	-0.1
1,688,181	+		A4249_RS08410	0.48	-0.0
1,688,182	-		A4249_RS08410	0.48	-0.0
1,688,405	-		A4249_RS08410	0.63	+0.5
1,688,405	-		A4249_RS08410	0.63	+0.0
1,688,405	-		A4249_RS08410	0.63	-0.8
1,688,405	-		A4249_RS08410	0.63	+0.3
1,688,461	+		A4249_RS08410	0.66	-0.1
1,688,462	-		A4249_RS08410	0.66	-0.4
1,688,462	-		A4249_RS08410	0.66	-0.0
1,688,464	-		A4249_RS08410	0.67	-0.2
1,688,464	-		A4249_RS08410	0.67	+0.1
1,688,861	-				+0.1
1,689,228	+		A4249_RS08415	0.19	-0.6
1,689,228	+		A4249_RS08415	0.19	+0.4
1,689,228	+		A4249_RS08415	0.19	+0.3
1,689,228	+		A4249_RS08415	0.19	-0.2
1,689,228	+		A4249_RS08415	0.19	-0.5
1,689,255	+		A4249_RS08415	0.22	-0.6
1,689,255	+		A4249_RS08415	0.22	-0.2
1,689,255	+		A4249_RS08415	0.22	-0.5
1,689,255	+		A4249_RS08415	0.22	+0.0
1,689,255	+		A4249_RS08415	0.22	-0.4
1,689,255	+		A4249_RS08415	0.22	+0.4
1,689,256	-		A4249_RS08415	0.22	+0.2
1,689,256	-		A4249_RS08415	0.22	-0.6
1,689,256	-		A4249_RS08415	0.22	+0.0
1,689,261	+		A4249_RS08415	0.22	+0.1
1,689,261	+		A4249_RS08415	0.22	-0.3
1,689,292	+		A4249_RS08415	0.25	+0.1
1,689,400	+		A4249_RS08415	0.35	-0.3
1,689,400	+		A4249_RS08415	0.35	+1.5
1,689,401	-		A4249_RS08415	0.35	-0.8
1,689,401	-		A4249_RS08415	0.35	-0.2
1,689,401	-		A4249_RS08415	0.35	-0.7
1,689,401	-		A4249_RS08415	0.35	+0.3
1,689,401	-		A4249_RS08415	0.35	-0.1
1,689,401	-		A4249_RS08415	0.35	-0.7
1,689,410	+		A4249_RS08415	0.36	+0.2
1,689,410	+		A4249_RS08415	0.36	-0.6
1,689,410	+		A4249_RS08415	0.36	+0.4
1,689,410	+		A4249_RS08415	0.36	+0.6
1,689,410	+		A4249_RS08415	0.36	+0.1
1,689,410	+		A4249_RS08415	0.36	+0.1
1,689,410	+		A4249_RS08415	0.36	+0.1
1,689,411	-		A4249_RS08415	0.36	-0.1
1,689,411	-		A4249_RS08415	0.36	+0.3
1,689,411	-		A4249_RS08415	0.36	-0.2
1,689,411	-		A4249_RS08415	0.36	-0.1
1,689,411	-		A4249_RS08415	0.36	-1.4
1,689,411	-		A4249_RS08415	0.36	-0.0
1,689,411	-		A4249_RS08415	0.36	-0.4
1,689,789	+		A4249_RS08415	0.72	+0.0
1,689,789	+		A4249_RS08415	0.72	-0.4
1,689,789	+		A4249_RS08415	0.72	-0.3
1,689,789	+		A4249_RS08415	0.72	-0.8
1,689,789	+		A4249_RS08415	0.72	+0.4
1,689,789	+		A4249_RS08415	0.72	-0.2
1,689,789	+		A4249_RS08415	0.72	+0.4
1,689,789	+		A4249_RS08415	0.72	-0.1
1,689,789	+		A4249_RS08415	0.72	-1.0
1,689,789	+		A4249_RS08415	0.72	-0.1
1,689,789	+		A4249_RS08415	0.72	-0.5
1,689,789	+		A4249_RS08415	0.72	+0.5
1,689,789	+		A4249_RS08415	0.72	-0.5
1,689,789	+		A4249_RS08415	0.72	-0.4
1,689,789	+		A4249_RS08415	0.72	-0.1
1,689,789	+		A4249_RS08415	0.72	-1.5
1,689,789	+		A4249_RS08415	0.72	-0.1
1,689,789	+		A4249_RS08415	0.72	+1.6
1,689,789	+		A4249_RS08415	0.72	-0.6
1,689,789	+		A4249_RS08415	0.72	-0.3
1,689,789	+		A4249_RS08415	0.72	-0.0
1,689,789	+		A4249_RS08415	0.72	+0.3
1,689,789	+		A4249_RS08415	0.72	+0.1
1,689,789	+		A4249_RS08415	0.72	+0.3
1,689,789	+		A4249_RS08415	0.72	-0.1
1,689,789	+		A4249_RS08415	0.72	-0.3
1,689,789	+		A4249_RS08415	0.72	-0.3
1,689,790	-		A4249_RS08415	0.72	+0.4
1,689,790	-		A4249_RS08415	0.72	-0.1
1,689,790	-		A4249_RS08415	0.72	-0.1
1,689,790	-		A4249_RS08415	0.72	-0.4
1,689,790	-		A4249_RS08415	0.72	-0.6
1,689,790	-		A4249_RS08415	0.72	-0.1
1,689,790	-		A4249_RS08415	0.72	-0.9
1,689,790	-		A4249_RS08415	0.72	+0.8
1,689,790	-		A4249_RS08415	0.72	-0.3
1,689,790	-		A4249_RS08415	0.72	-0.3
1,689,790	-		A4249_RS08415	0.72	+0.1
1,689,790	-		A4249_RS08415	0.72	+0.1
1,689,790	-		A4249_RS08415	0.72	-1.0
1,689,790	-		A4249_RS08415	0.72	+0.0
1,689,790	-		A4249_RS08415	0.72	-0.1
1,689,790	-		A4249_RS08415	0.72	-0.1
1,689,790	-		A4249_RS08415	0.72	+0.1
1,689,790	-		A4249_RS08415	0.72	+0.4
1,689,790	-		A4249_RS08415	0.72	+0.0
1,689,790	-		A4249_RS08415	0.72	-0.2
1,689,790	-		A4249_RS08415	0.72	-0.4
1,689,790	-		A4249_RS08415	0.72	-0.1
1,689,790	-		A4249_RS08415	0.72	-0.5
1,689,790	-		A4249_RS08415	0.72	+0.2
1,689,912	+		A4249_RS08415	0.83	-0.2
1,689,912	+		A4249_RS08415	0.83	-0.6
1,689,912	+		A4249_RS08415	0.83	-0.6
1,689,913	-		A4249_RS08415	0.83	+0.3
1,689,913	-		A4249_RS08415	0.83	-0.7
1,689,913	-		A4249_RS08415	0.83	+0.1
1,689,913	-		A4249_RS08415	0.83	-0.3
1,689,913	-		A4249_RS08415	0.83	+0.0