Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07335

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,462,796	+		A4249_RS07320	0.86	+0.3
1,462,796	+		A4249_RS07320	0.86	+0.0
1,463,083	-				-0.0
1,463,088	+				-0.9
1,463,088	+				-1.7
1,463,088	+				-0.9
1,463,088	+				+0.1
1,463,088	+				-0.2
1,463,089	-				-2.3
1,463,089	-				-0.6
1,463,089	-				+0.2
1,463,152	+		A4249_RS07330	0.13	+0.2
1,463,152	+		A4249_RS07330	0.13	-0.3
1,463,152	+		A4249_RS07330	0.13	+0.0
1,463,153	-		A4249_RS07330	0.13	-0.2
1,463,153	-		A4249_RS07330	0.13	+0.6
1,463,153	-		A4249_RS07330	0.13	+0.1
1,463,153	-		A4249_RS07330	0.13	-0.0
1,463,211	+		A4249_RS07330	0.23	-0.3
1,463,211	+		A4249_RS07330	0.23	-0.4
1,463,212	-		A4249_RS07330	0.23	+1.6
1,463,212	-		A4249_RS07330	0.23	+0.2
1,463,212	-		A4249_RS07330	0.23	-0.3
1,463,220	+		A4249_RS07330	0.25	-1.4
1,463,220	+		A4249_RS07330	0.25	+0.1
1,463,220	+		A4249_RS07330	0.25	-0.1
1,463,220	+		A4249_RS07330	0.25	-0.1
1,463,221	-		A4249_RS07330	0.25	+1.1
1,463,221	-		A4249_RS07330	0.25	-0.0
1,463,244	+		A4249_RS07330	0.29	+0.5
1,463,245	-		A4249_RS07330	0.29	+0.6
1,463,260	-		A4249_RS07330	0.31	-0.1
1,463,289	+		A4249_RS07330	0.36	-0.1
1,463,289	+		A4249_RS07330	0.36	-1.0
1,463,290	-		A4249_RS07330	0.37	-0.2
1,463,294	+		A4249_RS07330	0.37	+0.1
1,463,294	+		A4249_RS07330	0.37	-1.7
1,463,294	+		A4249_RS07330	0.37	+0.6
1,463,294	+		A4249_RS07330	0.37	+0.9
1,463,294	+		A4249_RS07330	0.37	+0.4
1,463,294	+		A4249_RS07330	0.37	+0.1
1,463,294	+		A4249_RS07330	0.37	+0.4
1,463,295	-		A4249_RS07330	0.37	-0.4
1,463,295	-		A4249_RS07330	0.37	-0.1
1,463,295	-		A4249_RS07330	0.37	-0.0
1,463,343	+		A4249_RS07330	0.46	+0.2
1,463,343	+		A4249_RS07330	0.46	-0.4
1,463,343	+		A4249_RS07330	0.46	-0.3
1,463,343	+		A4249_RS07330	0.46	+0.7
1,463,343	+		A4249_RS07330	0.46	+0.1
1,463,344	-		A4249_RS07330	0.46	+0.2
1,463,344	-		A4249_RS07330	0.46	+0.1
1,463,344	-		A4249_RS07330	0.46	+1.0
1,463,662	+				+0.1
1,463,662	+				-0.1
1,463,662	+				+0.1
1,463,663	-				+0.0
1,463,663	-				-0.2
1,463,663	-				-0.4
1,463,663	-				-0.2
1,463,688	+				-0.7
1,463,688	+				-1.1
1,463,688	+				-0.6
1,463,688	+				-0.4
1,463,688	+				-0.2
1,463,689	-				-0.3
1,463,689	-				+0.3
1,463,689	-				+0.0
1,463,689	-				+0.1
1,463,689	-				-0.8
1,463,797	-		A4249_RS07335	0.17	-0.6
1,463,797	-		A4249_RS07335	0.17	+0.1
1,463,889	+		A4249_RS07335	0.36	-1.2
1,463,889	+		A4249_RS07335	0.36	-0.2
1,463,889	+		A4249_RS07335	0.36	-0.5
1,463,890	-		A4249_RS07335	0.36	+0.6
1,464,156	+				+1.1
1,464,157	-				+0.1
1,464,216	+				-0.3
1,464,216	+				-0.2
1,464,216	+				-1.4
1,464,216	+				+1.8
1,464,216	+				-0.3
1,464,216	+				+0.2
1,464,217	-				-0.1
1,464,217	-				+1.4
1,464,217	-				-0.1
1,464,217	-				+0.0
1,464,217	-				-0.4
1,464,217	-				+0.5
1,464,217	-				+0.2
1,464,217	-				-0.3
1,464,217	-				+0.4
1,464,217	-				-0.1
1,464,217	-				-0.9
1,464,217	-				+0.2
1,464,217	-				+0.3
1,464,281	+				+0.1
1,464,341	+				+0.2
1,464,341	+				+0.4
1,464,341	+				+0.7
1,464,341	+				+0.4
1,464,342	-				+0.1
1,464,342	-				+0.0
1,464,342	-				+0.2
1,464,342	-				+0.0
1,464,342	-				+0.1
1,464,342	-				-0.6
1,464,342	-				+1.0
1,464,342	-				-0.7
1,464,342	-				-0.3
1,464,342	-				-1.3
1,464,342	-				-0.4
1,464,405	+				+0.5
1,464,405	+				+0.7
1,464,405	+				-0.4
1,464,406	-				+0.4
1,464,406	-				-0.7
1,464,406	-				-0.1
1,464,406	-				-0.3
1,464,413	+				-0.8
1,464,413	+				+0.3
1,464,413	+				-0.4
1,464,413	+				-0.0
1,464,413	+				+0.3
1,464,413	+				+0.4
1,464,413	+				+0.2
1,464,413	+				+0.0
1,464,413	+				+0.4
1,464,413	+				-2.3
1,464,413	+				-0.2
1,464,413	+				+0.6
1,464,413	+				+1.6
1,464,413	+				-0.2
1,464,414	-				-2.8
1,464,414	-				+0.2
1,464,414	-				-1.1
1,464,414	-				+0.0
1,464,414	-				-0.4
1,464,414	-				+0.0
1,464,414	-				+1.6
1,464,428	+				-0.2
1,464,429	-		A4249_RS07340	0.10	-0.4
1,464,429	-		A4249_RS07340	0.10	-0.2
1,464,429	-		A4249_RS07340	0.10	-0.3
1,464,429	-		A4249_RS07340	0.10	-0.5
1,464,797	+		A4249_RS07340	0.35	+0.2
1,464,797	+		A4249_RS07340	0.35	+0.1
1,464,798	-		A4249_RS07340	0.35	-1.1
1,464,798	-		A4249_RS07340	0.35	-0.0
1,464,869	+		A4249_RS07340	0.40	-0.8
1,464,869	+		A4249_RS07340	0.40	-0.2
1,464,869	+		A4249_RS07340	0.40	-0.6
1,464,869	+		A4249_RS07340	0.40	-0.2
1,464,974	+		A4249_RS07340	0.47	-0.2
1,464,974	+		A4249_RS07340	0.47	+0.0
1,464,975	-		A4249_RS07340	0.47	-0.4
1,464,975	-		A4249_RS07340	0.47	-0.1
1,465,071	+		A4249_RS07340	0.53	-0.1
1,465,071	+		A4249_RS07340	0.53	-1.9
1,465,072	-		A4249_RS07340	0.53	-0.0
1,465,073	+		A4249_RS07340	0.53	+0.2
1,465,074	-		A4249_RS07340	0.53	+0.1
1,465,074	-		A4249_RS07340	0.53	+0.3
1,465,074	-		A4249_RS07340	0.53	-0.4
1,465,074	-		A4249_RS07340	0.53	+0.2
1,465,074	-		A4249_RS07340	0.53	+0.5
1,465,074	-		A4249_RS07340	0.53	-0.6
1,465,074	-		A4249_RS07340	0.53	-0.0
1,465,074	-		A4249_RS07340	0.53	+0.0
1,465,200	+		A4249_RS07340	0.62	-0.8
1,465,201	-		A4249_RS07340	0.62	-0.0
1,465,201	-		A4249_RS07340	0.62	+0.0