Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06080

Experiment: Cytosine 0.9 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine 0.9 mM (C)
1,235,099	+				+0.1
1,235,099	+				+0.2
1,235,099	+				-0.1
1,235,193	-		A4249_RS06075	0.20	+0.2
1,235,810	+		A4249_RS06075	0.90	+0.2
1,235,811	-		A4249_RS06075	0.90	+0.3
1,235,986	+				-0.2
1,235,987	-				-1.0
1,235,987	-				+0.9
1,235,987	-				-0.0
1,235,987	-				-0.2
1,235,987	-				+0.2
1,235,987	-				-0.2
1,235,987	-				+0.8
1,236,030	+				-0.5
1,236,030	+				+0.0
1,236,030	+				-0.6
1,236,030	+				-1.5
1,236,031	-				-0.5
1,236,031	-				+0.5
1,236,031	-				-0.8
1,236,080	+				-0.4
1,236,081	-				+1.0
1,236,318	+		A4249_RS06080	0.41	+0.6
1,236,318	+		A4249_RS06080	0.41	-0.1
1,236,318	+		A4249_RS06080	0.41	-0.9
1,236,318	+		A4249_RS06080	0.41	-0.0
1,236,319	-		A4249_RS06080	0.41	-0.4
1,236,319	-		A4249_RS06080	0.41	+0.2
1,236,319	-		A4249_RS06080	0.41	+0.2
1,236,363	-		A4249_RS06080	0.47	-0.2
1,236,416	+		A4249_RS06080	0.54	-1.1
1,236,416	+		A4249_RS06080	0.54	+0.0
1,236,416	+		A4249_RS06080	0.54	-0.4
1,236,417	-		A4249_RS06080	0.54	-0.0
1,236,417	-		A4249_RS06080	0.54	-0.1
1,236,417	-		A4249_RS06080	0.54	-0.6
1,236,417	-		A4249_RS06080	0.54	+0.3
1,236,417	-		A4249_RS06080	0.54	+0.2
1,236,464	+		A4249_RS06080	0.61	-0.0
1,236,464	+		A4249_RS06080	0.61	+0.4
1,236,511	-		A4249_RS06080	0.67	+0.1
1,236,551	+		A4249_RS06080	0.72	-0.1
1,236,551	+		A4249_RS06080	0.72	-0.4
1,236,551	+		A4249_RS06080	0.72	-0.1
1,236,551	+		A4249_RS06080	0.72	-1.0
1,236,551	+		A4249_RS06080	0.72	-0.4
1,236,551	+		A4249_RS06080	0.72	-0.3
1,236,551	+		A4249_RS06080	0.72	-0.2
1,236,551	+		A4249_RS06080	0.72	+0.1
1,236,551	+		A4249_RS06080	0.72	-2.5
1,236,552	-		A4249_RS06080	0.72	+0.0
1,236,552	-		A4249_RS06080	0.72	+0.4
1,236,552	-		A4249_RS06080	0.72	+0.2
1,236,552	-		A4249_RS06080	0.72	+0.0
1,236,552	-		A4249_RS06080	0.72	+0.2
1,236,552	-		A4249_RS06080	0.72	+0.5
1,236,560	+		A4249_RS06080	0.74	-0.8
1,236,560	+		A4249_RS06080	0.74	+0.3
1,236,560	+		A4249_RS06080	0.74	-0.1
1,236,560	+		A4249_RS06080	0.74	+0.4
1,236,560	+		A4249_RS06080	0.74	+0.5
1,236,561	-		A4249_RS06080	0.74	+0.4
1,236,561	-		A4249_RS06080	0.74	+0.2
1,236,561	-		A4249_RS06080	0.74	+0.5
1,236,561	-		A4249_RS06080	0.74	-0.1
1,236,561	-		A4249_RS06080	0.74	-0.2
1,236,561	-		A4249_RS06080	0.74	-0.1
1,236,561	-		A4249_RS06080	0.74	+0.4
1,236,561	-		A4249_RS06080	0.74	-0.2
1,236,615	+		A4249_RS06080	0.81	+0.6
1,236,615	+		A4249_RS06080	0.81	+0.1
1,236,615	+		A4249_RS06080	0.81	-0.0
1,236,616	-		A4249_RS06080	0.81	-0.6
1,236,616	-		A4249_RS06080	0.81	+0.3
1,236,616	-		A4249_RS06080	0.81	-0.4
1,236,650	+		A4249_RS06080	0.86	-0.4
1,236,650	+		A4249_RS06080	0.86	+0.7
1,236,650	+		A4249_RS06080	0.86	+0.8
1,236,650	+		A4249_RS06080	0.86	+0.4
1,236,650	+		A4249_RS06080	0.86	+0.5
1,236,651	-		A4249_RS06080	0.86	+0.3
1,236,689	+				+0.6
1,236,689	+				+0.5
1,236,689	+				+0.0
1,236,689	+				+0.0
1,236,689	+				+0.7
1,236,689	+				-0.3
1,236,689	+				-0.7
1,236,689	+				-1.3
1,236,690	-				-0.2
1,236,690	-				-0.4
1,236,690	-				-0.4
1,236,690	-				+0.4
1,236,690	-				-0.0
1,236,690	-				-0.3
1,236,690	-				+0.2
1,236,690	-				+0.2
1,236,690	-				-0.2
1,236,690	-				-0.7
1,236,690	-				+0.6
1,236,799	+				+0.9
1,236,799	+				+0.7
1,236,799	+				+0.2
1,236,799	+				-0.4
1,236,799	+				-0.2
1,236,799	+				-0.2
1,236,799	+				-0.2
1,236,799	+				-0.1
1,236,799	+				-0.4
1,236,799	+				-1.0
1,236,799	+				+1.0
1,236,799	+				-0.5
1,236,799	+				+0.0
1,236,799	+				-0.3
1,236,799	+				-0.6
1,236,799	+				+0.2
1,236,799	+				-0.0
1,236,799	+				+0.9
1,236,800	-				-0.5
1,236,800	-				+1.1
1,236,800	-				-1.4
1,236,800	-				+1.3
1,236,800	-				+0.4
1,236,800	-				+0.6
1,236,800	-				+0.2
1,236,800	-				-1.1
1,236,800	-				-0.2
1,236,800	-				-0.4
1,236,800	-				-2.1
1,236,800	-				-0.7
1,236,800	-				+0.2
1,236,800	-				-0.5
1,236,800	-				+0.2
1,236,800	-				+0.0
1,236,800	-				+0.3
1,236,886	+				+0.3
1,236,887	-				-0.1
1,236,887	-				-0.4
1,236,919	+		A4249_RS06085	0.12	-0.0
1,236,920	-		A4249_RS06085	0.12	-0.1
1,236,920	-		A4249_RS06085	0.12	-0.3
1,236,920	-		A4249_RS06085	0.12	-1.7
1,236,920	-		A4249_RS06085	0.12	-0.4
1,236,920	-		A4249_RS06085	0.12	-0.1
1,236,920	-		A4249_RS06085	0.12	-0.0
1,237,085	+		A4249_RS06085	0.33	-0.9
1,237,085	+		A4249_RS06085	0.33	-1.5
1,237,085	+		A4249_RS06085	0.33	-0.0
1,237,085	+		A4249_RS06085	0.33	-0.5
1,237,085	+		A4249_RS06085	0.33	+0.0
1,237,085	+		A4249_RS06085	0.33	-1.1
1,237,085	+		A4249_RS06085	0.33	-0.5
1,237,085	+		A4249_RS06085	0.33	+0.2
1,237,085	+		A4249_RS06085	0.33	-0.6
1,237,085	+		A4249_RS06085	0.33	-1.4
1,237,085	+		A4249_RS06085	0.33	+0.1
1,237,086	-		A4249_RS06085	0.33	+0.0
1,237,086	-		A4249_RS06085	0.33	+0.8
1,237,086	-		A4249_RS06085	0.33	+0.5
1,237,086	-		A4249_RS06085	0.33	+0.2
1,237,086	-		A4249_RS06085	0.33	-0.7
1,237,086	-		A4249_RS06085	0.33	+0.3
1,237,086	-		A4249_RS06085	0.33	-2.4
1,237,086	-		A4249_RS06085	0.33	+0.3
1,237,167	-		A4249_RS06085	0.44	-0.1
1,237,253	+		A4249_RS06085	0.55	+0.5
1,237,253	+		A4249_RS06085	0.55	-0.6
1,237,254	-		A4249_RS06085	0.55	-1.0
1,237,254	-		A4249_RS06085	0.55	+1.1
1,237,254	-		A4249_RS06085	0.55	+0.7
1,237,254	-		A4249_RS06085	0.55	+0.2
1,237,346	+		A4249_RS06085	0.67	-0.1
1,237,346	+		A4249_RS06085	0.67	-0.6
1,237,347	-		A4249_RS06085	0.67	+0.2
1,237,347	-		A4249_RS06085	0.67	+0.9
1,237,535	+				-0.3
1,237,575	+				-0.0
1,237,668	+				+0.3
1,237,668	+				-0.6
1,237,668	+				+0.3
1,237,669	-				+0.6
1,237,669	-				-0.3