Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03825 and A4249_RS03830 are separated by 54 nucleotides A4249_RS03830 and A4249_RS03835 are separated by 17 nucleotides A4249_RS03835 and A4249_RS03840 are separated by 0 nucleotides
A4249_RS03825: A4249_RS03825 - MATE family efflux transporter, at 807,530 to 808,888
_RS03825
A4249_RS03830: A4249_RS03830 - methionine--tRNA ligase, at 808,943 to 810,646
_RS03830
A4249_RS03835: A4249_RS03835 - 2OG-Fe(II) oxygenase family protein, at 810,664 to 811,377
_RS03835
A4249_RS03840: A4249_RS03840 - rhodanese-like domain-containing protein, at 811,378 to 811,716
_RS03840
Position (kb) 808
809
810
811 Strain fitness (log2 ratio) -2
-1
0
1 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.084 kb on - strand, within A4249_RS03825 at 808.084 kb on - strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.296 kb on - strand, within A4249_RS03825 at 808.296 kb on - strand, within A4249_RS03825 at 808.296 kb on - strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.458 kb on - strand, within A4249_RS03825 at 808.458 kb on - strand, within A4249_RS03825 at 808.545 kb on + strand, within A4249_RS03825 at 808.545 kb on + strand, within A4249_RS03825 at 808.545 kb on + strand, within A4249_RS03825 at 808.545 kb on + strand, within A4249_RS03825 at 808.545 kb on + strand, within A4249_RS03825 at 808.546 kb on - strand, within A4249_RS03825 at 808.546 kb on - strand, within A4249_RS03825 at 808.546 kb on - strand, within A4249_RS03825 at 808.580 kb on + strand, within A4249_RS03825 at 808.580 kb on + strand, within A4249_RS03825 at 808.580 kb on + strand, within A4249_RS03825 at 808.580 kb on + strand, within A4249_RS03825 at 808.580 kb on + strand, within A4249_RS03825 at 808.580 kb on + strand, within A4249_RS03825 at 808.581 kb on - strand, within A4249_RS03825 at 808.581 kb on - strand, within A4249_RS03825 at 808.581 kb on - strand, within A4249_RS03825 at 808.582 kb on + strand, within A4249_RS03825 at 808.582 kb on + strand, within A4249_RS03825 at 808.583 kb on - strand, within A4249_RS03825 at 808.583 kb on - strand, within A4249_RS03825 at 808.583 kb on - strand, within A4249_RS03825 at 808.583 kb on - strand, within A4249_RS03825 at 808.658 kb on - strand, within A4249_RS03825 at 808.733 kb on + strand, within A4249_RS03825 at 808.858 kb on + strand at 808.859 kb on - strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.908 kb on + strand at 808.909 kb on - strand at 808.910 kb on + strand at 808.910 kb on + strand at 808.910 kb on + strand at 810.659 kb on - strand at 810.808 kb on + strand, within A4249_RS03835 at 810.809 kb on - strand, within A4249_RS03835 at 810.809 kb on - strand, within A4249_RS03835 at 810.809 kb on - strand, within A4249_RS03835 at 810.937 kb on + strand, within A4249_RS03835 at 810.937 kb on + strand, within A4249_RS03835 at 810.937 kb on + strand, within A4249_RS03835 at 810.937 kb on + strand, within A4249_RS03835 at 810.937 kb on + strand, within A4249_RS03835 at 810.937 kb on + strand, within A4249_RS03835 at 810.938 kb on - strand, within A4249_RS03835 at 810.938 kb on - strand, within A4249_RS03835 at 810.943 kb on + strand, within A4249_RS03835 at 810.943 kb on + strand, within A4249_RS03835 at 810.943 kb on + strand, within A4249_RS03835 at 810.943 kb on + strand, within A4249_RS03835 at 810.961 kb on + strand, within A4249_RS03835 at 810.961 kb on + strand, within A4249_RS03835 at 810.962 kb on - strand, within A4249_RS03835 at 810.962 kb on - strand, within A4249_RS03835 at 810.962 kb on - strand, within A4249_RS03835 at 810.962 kb on - strand, within A4249_RS03835 at 811.168 kb on + strand, within A4249_RS03835 at 811.168 kb on + strand, within A4249_RS03835 at 811.168 kb on + strand, within A4249_RS03835 at 811.168 kb on + strand, within A4249_RS03835 at 811.168 kb on + strand, within A4249_RS03835 at 811.169 kb on - strand, within A4249_RS03835 at 811.169 kb on - strand, within A4249_RS03835 at 811.169 kb on - strand, within A4249_RS03835 at 811.169 kb on - strand, within A4249_RS03835 at 811.169 kb on - strand, within A4249_RS03835 at 811.257 kb on + strand, within A4249_RS03835 at 811.257 kb on + strand, within A4249_RS03835 at 811.257 kb on + strand, within A4249_RS03835 at 811.257 kb on + strand, within A4249_RS03835 at 811.257 kb on + strand, within A4249_RS03835 at 811.257 kb on + strand, within A4249_RS03835 at 811.257 kb on + strand, within A4249_RS03835 at 811.258 kb on - strand, within A4249_RS03835 at 811.258 kb on - strand, within A4249_RS03835
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 807,974 + A4249_RS03825 0.33 +0.8 807,974 + A4249_RS03825 0.33 +0.5 807,974 + A4249_RS03825 0.33 +1.1 807,974 + A4249_RS03825 0.33 +0.2 807,974 + A4249_RS03825 0.33 -0.2 807,974 + A4249_RS03825 0.33 +0.9 807,974 + A4249_RS03825 0.33 -0.5 807,975 - A4249_RS03825 0.33 +0.0 807,975 - A4249_RS03825 0.33 +0.9 807,975 - A4249_RS03825 0.33 +0.0 807,975 - A4249_RS03825 0.33 +0.1 807,975 - A4249_RS03825 0.33 +0.2 807,975 - A4249_RS03825 0.33 +0.3 807,975 - A4249_RS03825 0.33 -1.2 807,975 - A4249_RS03825 0.33 +0.3 808,083 + A4249_RS03825 0.41 -0.6 808,083 + A4249_RS03825 0.41 -0.7 808,083 + A4249_RS03825 0.41 +0.5 808,083 + A4249_RS03825 0.41 +0.0 808,084 - A4249_RS03825 0.41 -0.3 808,084 - A4249_RS03825 0.41 +0.0 808,184 + A4249_RS03825 0.48 +0.3 808,184 + A4249_RS03825 0.48 -0.4 808,184 + A4249_RS03825 0.48 -0.4 808,184 + A4249_RS03825 0.48 -0.2 808,184 + A4249_RS03825 0.48 +0.1 808,185 - A4249_RS03825 0.48 +0.2 808,185 - A4249_RS03825 0.48 +0.2 808,185 - A4249_RS03825 0.48 -0.4 808,185 - A4249_RS03825 0.48 +0.3 808,185 - A4249_RS03825 0.48 +0.0 808,185 - A4249_RS03825 0.48 -0.4 808,185 - A4249_RS03825 0.48 -1.5 808,185 - A4249_RS03825 0.48 +0.1 808,185 - A4249_RS03825 0.48 +0.2 808,185 - A4249_RS03825 0.48 +0.2 808,185 - A4249_RS03825 0.48 +0.7 808,185 - A4249_RS03825 0.48 -0.6 808,295 + A4249_RS03825 0.56 +0.5 808,295 + A4249_RS03825 0.56 -0.4 808,295 + A4249_RS03825 0.56 -0.7 808,295 + A4249_RS03825 0.56 -0.1 808,295 + A4249_RS03825 0.56 +0.1 808,296 - A4249_RS03825 0.56 -0.4 808,296 - A4249_RS03825 0.56 +0.0 808,296 - A4249_RS03825 0.56 +0.3 808,457 + A4249_RS03825 0.68 -0.0 808,457 + A4249_RS03825 0.68 +0.0 808,457 + A4249_RS03825 0.68 -0.5 808,457 + A4249_RS03825 0.68 -0.5 808,457 + A4249_RS03825 0.68 -0.6 808,458 - A4249_RS03825 0.68 -0.6 808,458 - A4249_RS03825 0.68 +0.2 808,545 + A4249_RS03825 0.75 -0.4 808,545 + A4249_RS03825 0.75 +0.9 808,545 + A4249_RS03825 0.75 +0.5 808,545 + A4249_RS03825 0.75 -0.0 808,545 + A4249_RS03825 0.75 -0.1 808,546 - A4249_RS03825 0.75 +0.3 808,546 - A4249_RS03825 0.75 -0.4 808,546 - A4249_RS03825 0.75 -0.4 808,580 + A4249_RS03825 0.77 -0.5 808,580 + A4249_RS03825 0.77 -0.6 808,580 + A4249_RS03825 0.77 -0.2 808,580 + A4249_RS03825 0.77 -0.7 808,580 + A4249_RS03825 0.77 +0.6 808,580 + A4249_RS03825 0.77 -0.6 808,581 - A4249_RS03825 0.77 +0.3 808,581 - A4249_RS03825 0.77 -1.2 808,581 - A4249_RS03825 0.77 -0.1 808,582 + A4249_RS03825 0.77 -0.0 808,582 + A4249_RS03825 0.77 -0.3 808,583 - A4249_RS03825 0.77 -0.7 808,583 - A4249_RS03825 0.77 -0.1 808,583 - A4249_RS03825 0.77 +0.6 808,583 - A4249_RS03825 0.77 -0.5 808,658 - A4249_RS03825 0.83 +0.5 808,733 + A4249_RS03825 0.89 -1.0 808,858 + +0.2 808,859 - +1.6 808,908 + -0.1 808,908 + -0.5 808,908 + +0.2 808,908 + -0.4 808,908 + +0.2 808,908 + -0.7 808,908 + -0.1 808,908 + -0.1 808,908 + +0.0 808,908 + +0.4 808,908 + -0.2 808,908 + -0.2 808,908 + -0.2 808,909 - +1.2 808,910 + +0.2 808,910 + +0.8 808,910 + +0.8 810,659 - -0.5 810,808 + A4249_RS03835 0.20 -0.1 810,809 - A4249_RS03835 0.20 -0.1 810,809 - A4249_RS03835 0.20 +0.4 810,809 - A4249_RS03835 0.20 -0.0 810,937 + A4249_RS03835 0.38 -0.1 810,937 + A4249_RS03835 0.38 -0.3 810,937 + A4249_RS03835 0.38 -0.4 810,937 + A4249_RS03835 0.38 +0.4 810,937 + A4249_RS03835 0.38 +0.1 810,937 + A4249_RS03835 0.38 -0.2 810,938 - A4249_RS03835 0.38 -0.1 810,938 - A4249_RS03835 0.38 -1.2 810,943 + A4249_RS03835 0.39 -0.2 810,943 + A4249_RS03835 0.39 +0.4 810,943 + A4249_RS03835 0.39 +0.9 810,943 + A4249_RS03835 0.39 +0.3 810,961 + A4249_RS03835 0.42 -0.1 810,961 + A4249_RS03835 0.42 +0.0 810,962 - A4249_RS03835 0.42 -0.0 810,962 - A4249_RS03835 0.42 +0.8 810,962 - A4249_RS03835 0.42 +0.8 810,962 - A4249_RS03835 0.42 -0.3 811,168 + A4249_RS03835 0.71 -0.2 811,168 + A4249_RS03835 0.71 -0.0 811,168 + A4249_RS03835 0.71 -1.9 811,168 + A4249_RS03835 0.71 -0.2 811,168 + A4249_RS03835 0.71 +0.3 811,169 - A4249_RS03835 0.71 -1.1 811,169 - A4249_RS03835 0.71 -1.2 811,169 - A4249_RS03835 0.71 -0.2 811,169 - A4249_RS03835 0.71 +0.4 811,169 - A4249_RS03835 0.71 -0.1 811,257 + A4249_RS03835 0.83 -1.0 811,257 + A4249_RS03835 0.83 -0.5 811,257 + A4249_RS03835 0.83 +0.6 811,257 + A4249_RS03835 0.83 +0.6 811,257 + A4249_RS03835 0.83 +1.4 811,257 + A4249_RS03835 0.83 -0.1 811,257 + A4249_RS03835 0.83 -0.7 811,258 - A4249_RS03835 0.83 -0.3 811,258 - A4249_RS03835 0.83 +0.7
Or see this region's nucleotide sequence