Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03145 and A4249_RS03150 overlap by 1 nucleotides A4249_RS03150 and A4249_RS03155 are separated by 118 nucleotides A4249_RS03155 and A4249_RS03160 overlap by 36 nucleotides A4249_RS03160 and A4249_RS03165 are separated by 30 nucleotides A4249_RS03165 and A4249_RS03170 are separated by 72 nucleotides
A4249_RS03145: A4249_RS03145 - CusA/CzcA family heavy metal efflux RND transporter, at 663,156 to 666,376
_RS03145
A4249_RS03150: A4249_RS03150 - cation transporter, at 666,376 to 666,975
_RS03150
A4249_RS03155: A4249_RS03155 - acyltransferase, at 667,094 to 668,260
_RS03155
A4249_RS03160: A4249_RS03160 - DUF411 domain-containing protein, at 668,225 to 668,692
_RS03160
A4249_RS03165: A4249_RS03165 - hypothetical protein, at 668,723 to 668,953
_RS03165
A4249_RS03170: A4249_RS03170 - hypothetical protein, at 669,026 to 669,226
_RS03170
Position (kb) 667
668
669 Strain fitness (log2 ratio) -1
0
1 at 666.211 kb on + strand at 666.211 kb on + strand at 666.211 kb on + strand at 666.211 kb on + strand at 666.211 kb on + strand at 666.212 kb on - strand at 666.212 kb on - strand at 666.212 kb on - strand at 666.455 kb on + strand, within A4249_RS03150 at 666.456 kb on - strand, within A4249_RS03150 at 666.456 kb on - strand, within A4249_RS03150 at 666.538 kb on + strand, within A4249_RS03150 at 666.538 kb on + strand, within A4249_RS03150 at 666.538 kb on + strand, within A4249_RS03150 at 666.539 kb on - strand, within A4249_RS03150 at 666.539 kb on - strand, within A4249_RS03150 at 666.539 kb on - strand, within A4249_RS03150 at 666.539 kb on - strand, within A4249_RS03150 at 666.539 kb on - strand, within A4249_RS03150 at 666.680 kb on + strand, within A4249_RS03150 at 666.681 kb on - strand, within A4249_RS03150 at 666.681 kb on - strand, within A4249_RS03150 at 666.681 kb on - strand, within A4249_RS03150 at 666.681 kb on - strand, within A4249_RS03150 at 666.891 kb on - strand, within A4249_RS03150 at 666.891 kb on - strand, within A4249_RS03150 at 666.891 kb on - strand, within A4249_RS03150 at 666.891 kb on - strand, within A4249_RS03150 at 666.891 kb on - strand, within A4249_RS03150 at 666.891 kb on - strand, within A4249_RS03150 at 666.991 kb on - strand at 667.056 kb on + strand at 667.082 kb on + strand at 667.082 kb on + strand at 667.082 kb on + strand at 667.083 kb on - strand at 667.083 kb on - strand at 667.083 kb on - strand at 667.083 kb on - strand at 667.199 kb on + strand at 667.199 kb on + strand at 667.199 kb on + strand at 667.199 kb on + strand at 667.199 kb on + strand at 667.262 kb on + strand, within A4249_RS03155 at 667.263 kb on - strand, within A4249_RS03155 at 667.263 kb on - strand, within A4249_RS03155 at 667.263 kb on - strand, within A4249_RS03155 at 667.298 kb on + strand, within A4249_RS03155 at 667.299 kb on - strand, within A4249_RS03155 at 667.316 kb on + strand, within A4249_RS03155 at 667.316 kb on + strand, within A4249_RS03155 at 667.358 kb on + strand, within A4249_RS03155 at 667.358 kb on + strand, within A4249_RS03155 at 667.359 kb on - strand, within A4249_RS03155 at 667.359 kb on - strand, within A4249_RS03155 at 667.359 kb on - strand, within A4249_RS03155 at 667.411 kb on + strand, within A4249_RS03155 at 667.412 kb on - strand, within A4249_RS03155 at 667.586 kb on + strand, within A4249_RS03155 at 667.586 kb on + strand, within A4249_RS03155 at 667.586 kb on + strand, within A4249_RS03155 at 667.587 kb on - strand, within A4249_RS03155 at 667.587 kb on - strand, within A4249_RS03155 at 667.587 kb on - strand, within A4249_RS03155 at 667.587 kb on - strand, within A4249_RS03155 at 667.587 kb on - strand, within A4249_RS03155 at 667.587 kb on - strand, within A4249_RS03155 at 667.712 kb on + strand, within A4249_RS03155 at 667.712 kb on + strand, within A4249_RS03155 at 667.713 kb on - strand, within A4249_RS03155 at 667.713 kb on - strand, within A4249_RS03155 at 667.713 kb on - strand, within A4249_RS03155 at 667.713 kb on - strand, within A4249_RS03155 at 667.784 kb on + strand, within A4249_RS03155 at 667.784 kb on + strand, within A4249_RS03155 at 667.784 kb on + strand, within A4249_RS03155 at 667.784 kb on + strand, within A4249_RS03155 at 667.785 kb on - strand, within A4249_RS03155 at 667.785 kb on - strand, within A4249_RS03155 at 667.785 kb on - strand, within A4249_RS03155 at 667.785 kb on - strand, within A4249_RS03155 at 667.799 kb on + strand, within A4249_RS03155 at 667.799 kb on + strand, within A4249_RS03155 at 667.799 kb on + strand, within A4249_RS03155 at 667.799 kb on + strand, within A4249_RS03155 at 667.799 kb on + strand, within A4249_RS03155 at 667.799 kb on + strand, within A4249_RS03155 at 667.799 kb on + strand, within A4249_RS03155 at 667.800 kb on - strand, within A4249_RS03155 at 667.800 kb on - strand, within A4249_RS03155 at 668.014 kb on + strand, within A4249_RS03155 at 668.015 kb on - strand, within A4249_RS03155 at 668.287 kb on + strand, within A4249_RS03160 at 668.287 kb on + strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.288 kb on - strand, within A4249_RS03160 at 668.289 kb on + strand, within A4249_RS03160 at 668.289 kb on + strand, within A4249_RS03160 at 668.289 kb on + strand, within A4249_RS03160 at 668.289 kb on + strand, within A4249_RS03160 at 668.290 kb on - strand, within A4249_RS03160 at 668.290 kb on - strand, within A4249_RS03160 at 668.421 kb on + strand, within A4249_RS03160 at 668.516 kb on + strand, within A4249_RS03160 at 668.517 kb on - strand, within A4249_RS03160 at 668.517 kb on - strand, within A4249_RS03160 at 668.583 kb on + strand, within A4249_RS03160 at 668.583 kb on + strand, within A4249_RS03160 at 668.584 kb on - strand, within A4249_RS03160 at 668.724 kb on + strand at 669.168 kb on + strand, within A4249_RS03170 at 669.168 kb on + strand, within A4249_RS03170 at 669.169 kb on - strand, within A4249_RS03170 at 669.169 kb on - strand, within A4249_RS03170
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 666,211 + -0.5 666,211 + +0.4 666,211 + +0.1 666,211 + -0.1 666,211 + -0.2 666,212 - +0.4 666,212 - +0.5 666,212 - +0.2 666,455 + A4249_RS03150 0.13 -0.1 666,456 - A4249_RS03150 0.13 +0.3 666,456 - A4249_RS03150 0.13 -0.6 666,538 + A4249_RS03150 0.27 +0.5 666,538 + A4249_RS03150 0.27 +0.2 666,538 + A4249_RS03150 0.27 +0.1 666,539 - A4249_RS03150 0.27 -0.1 666,539 - A4249_RS03150 0.27 -0.6 666,539 - A4249_RS03150 0.27 +0.0 666,539 - A4249_RS03150 0.27 +0.5 666,539 - A4249_RS03150 0.27 +0.2 666,680 + A4249_RS03150 0.51 -1.4 666,681 - A4249_RS03150 0.51 +0.0 666,681 - A4249_RS03150 0.51 +0.8 666,681 - A4249_RS03150 0.51 -0.2 666,681 - A4249_RS03150 0.51 -0.6 666,891 - A4249_RS03150 0.86 +0.0 666,891 - A4249_RS03150 0.86 +0.2 666,891 - A4249_RS03150 0.86 +0.3 666,891 - A4249_RS03150 0.86 +0.4 666,891 - A4249_RS03150 0.86 -0.7 666,891 - A4249_RS03150 0.86 -0.8 666,991 - -0.1 667,056 + -0.6 667,082 + -0.2 667,082 + -0.1 667,082 + -1.0 667,083 - -1.2 667,083 - -0.6 667,083 - +1.6 667,083 - -1.0 667,199 + +0.1 667,199 + -0.6 667,199 + -0.4 667,199 + -1.2 667,199 + -0.3 667,262 + A4249_RS03155 0.14 -1.0 667,263 - A4249_RS03155 0.14 +0.2 667,263 - A4249_RS03155 0.14 +0.5 667,263 - A4249_RS03155 0.14 +0.7 667,298 + A4249_RS03155 0.17 -0.1 667,299 - A4249_RS03155 0.18 -0.6 667,316 + A4249_RS03155 0.19 +0.2 667,316 + A4249_RS03155 0.19 -0.1 667,358 + A4249_RS03155 0.23 +0.6 667,358 + A4249_RS03155 0.23 -0.5 667,359 - A4249_RS03155 0.23 +0.3 667,359 - A4249_RS03155 0.23 +0.1 667,359 - A4249_RS03155 0.23 -0.6 667,411 + A4249_RS03155 0.27 +0.5 667,412 - A4249_RS03155 0.27 +0.2 667,586 + A4249_RS03155 0.42 -0.5 667,586 + A4249_RS03155 0.42 -0.4 667,586 + A4249_RS03155 0.42 -0.2 667,587 - A4249_RS03155 0.42 -0.3 667,587 - A4249_RS03155 0.42 -0.7 667,587 - A4249_RS03155 0.42 +0.6 667,587 - A4249_RS03155 0.42 -1.1 667,587 - A4249_RS03155 0.42 -0.0 667,587 - A4249_RS03155 0.42 +0.0 667,712 + A4249_RS03155 0.53 -0.3 667,712 + A4249_RS03155 0.53 +0.2 667,713 - A4249_RS03155 0.53 -0.7 667,713 - A4249_RS03155 0.53 +0.4 667,713 - A4249_RS03155 0.53 -0.3 667,713 - A4249_RS03155 0.53 +0.0 667,784 + A4249_RS03155 0.59 +0.5 667,784 + A4249_RS03155 0.59 +0.2 667,784 + A4249_RS03155 0.59 +0.4 667,784 + A4249_RS03155 0.59 -0.9 667,785 - A4249_RS03155 0.59 +0.0 667,785 - A4249_RS03155 0.59 -0.1 667,785 - A4249_RS03155 0.59 -0.8 667,785 - A4249_RS03155 0.59 -1.2 667,799 + A4249_RS03155 0.60 -1.5 667,799 + A4249_RS03155 0.60 -1.2 667,799 + A4249_RS03155 0.60 +0.9 667,799 + A4249_RS03155 0.60 +0.3 667,799 + A4249_RS03155 0.60 +0.0 667,799 + A4249_RS03155 0.60 +0.1 667,799 + A4249_RS03155 0.60 +1.4 667,800 - A4249_RS03155 0.60 -0.4 667,800 - A4249_RS03155 0.60 -0.3 668,014 + A4249_RS03155 0.79 -0.2 668,015 - A4249_RS03155 0.79 +1.1 668,287 + A4249_RS03160 0.13 -0.9 668,287 + A4249_RS03160 0.13 -0.4 668,288 - A4249_RS03160 0.13 +1.2 668,288 - A4249_RS03160 0.13 -0.6 668,288 - A4249_RS03160 0.13 -0.3 668,288 - A4249_RS03160 0.13 +0.5 668,288 - A4249_RS03160 0.13 -1.7 668,288 - A4249_RS03160 0.13 -0.7 668,288 - A4249_RS03160 0.13 -0.1 668,288 - A4249_RS03160 0.13 -0.9 668,289 + A4249_RS03160 0.14 -0.1 668,289 + A4249_RS03160 0.14 -0.6 668,289 + A4249_RS03160 0.14 +0.2 668,289 + A4249_RS03160 0.14 +0.5 668,290 - A4249_RS03160 0.14 -0.3 668,290 - A4249_RS03160 0.14 -1.1 668,421 + A4249_RS03160 0.42 +0.7 668,516 + A4249_RS03160 0.62 -0.8 668,517 - A4249_RS03160 0.62 -0.2 668,517 - A4249_RS03160 0.62 +0.3 668,583 + A4249_RS03160 0.76 -0.3 668,583 + A4249_RS03160 0.76 +0.5 668,584 - A4249_RS03160 0.77 -0.3 668,724 + -1.0 669,168 + A4249_RS03170 0.71 +0.2 669,168 + A4249_RS03170 0.71 +0.9 669,169 - A4249_RS03170 0.71 -0.2 669,169 - A4249_RS03170 0.71 -0.0
Or see this region's nucleotide sequence