Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS01725

Experiment: Cytosine 0.9 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS01720 and A4249_RS01725 are separated by 78 nucleotidesA4249_RS01725 and A4249_RS01730 are separated by 112 nucleotides A4249_RS01720: A4249_RS01720 - SDR family oxidoreductase, at 327,178 to 328,164 _RS01720 A4249_RS01725: A4249_RS01725 - hypothetical protein, at 328,243 to 328,560 _RS01725 A4249_RS01730: A4249_RS01730 - glucans biosynthesis glucosyltransferase MdoH, at 328,673 to 330,637 _RS01730 Position (kb) 328 329Strain fitness (log2 ratio) -1 0 1at 327.260 kb on + strandat 327.260 kb on + strandat 327.437 kb on + strand, within A4249_RS01720at 327.437 kb on + strand, within A4249_RS01720at 327.467 kb on + strand, within A4249_RS01720at 327.467 kb on + strand, within A4249_RS01720at 327.467 kb on + strand, within A4249_RS01720at 327.467 kb on + strand, within A4249_RS01720at 327.467 kb on + strand, within A4249_RS01720at 327.468 kb on - strand, within A4249_RS01720at 327.468 kb on - strand, within A4249_RS01720at 327.572 kb on + strand, within A4249_RS01720at 327.573 kb on - strand, within A4249_RS01720at 327.573 kb on - strand, within A4249_RS01720at 327.573 kb on - strand, within A4249_RS01720at 327.573 kb on - strand, within A4249_RS01720at 327.578 kb on + strand, within A4249_RS01720at 327.579 kb on - strand, within A4249_RS01720at 327.579 kb on - strand, within A4249_RS01720at 327.579 kb on - strand, within A4249_RS01720at 327.614 kb on + strand, within A4249_RS01720at 327.614 kb on + strand, within A4249_RS01720at 327.614 kb on + strand, within A4249_RS01720at 327.614 kb on + strand, within A4249_RS01720at 327.615 kb on - strand, within A4249_RS01720at 327.615 kb on - strand, within A4249_RS01720at 327.615 kb on - strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.953 kb on + strand, within A4249_RS01720at 327.954 kb on - strand, within A4249_RS01720at 327.954 kb on - strand, within A4249_RS01720at 327.954 kb on - strand, within A4249_RS01720at 327.954 kb on - strand, within A4249_RS01720at 327.970 kb on + strand, within A4249_RS01720at 327.971 kb on - strand, within A4249_RS01720at 327.971 kb on - strand, within A4249_RS01720at 328.493 kb on + strand, within A4249_RS01725at 328.493 kb on + strand, within A4249_RS01725at 328.493 kb on + strand, within A4249_RS01725at 328.493 kb on + strand, within A4249_RS01725at 328.493 kb on + strand, within A4249_RS01725at 328.494 kb on - strand, within A4249_RS01725at 328.593 kb on + strandat 328.593 kb on + strandat 328.593 kb on + strandat 328.593 kb on + strandat 328.594 kb on - strandat 328.594 kb on - strandat 328.594 kb on - strandat 328.594 kb on - strandat 328.594 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C)
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327,260 + -0.4
327,260 + +0.0
327,437 + A4249_RS01720 0.26 +0.6
327,437 + A4249_RS01720 0.26 -0.5
327,467 + A4249_RS01720 0.29 -0.9
327,467 + A4249_RS01720 0.29 +0.6
327,467 + A4249_RS01720 0.29 +0.3
327,467 + A4249_RS01720 0.29 +0.8
327,467 + A4249_RS01720 0.29 -0.3
327,468 - A4249_RS01720 0.29 -0.2
327,468 - A4249_RS01720 0.29 +1.0
327,572 + A4249_RS01720 0.40 -1.7
327,573 - A4249_RS01720 0.40 -0.4
327,573 - A4249_RS01720 0.40 -0.4
327,573 - A4249_RS01720 0.40 +0.2
327,573 - A4249_RS01720 0.40 -0.0
327,578 + A4249_RS01720 0.41 -0.1
327,579 - A4249_RS01720 0.41 -0.5
327,579 - A4249_RS01720 0.41 -0.3
327,579 - A4249_RS01720 0.41 -1.4
327,614 + A4249_RS01720 0.44 -0.2
327,614 + A4249_RS01720 0.44 -0.7
327,614 + A4249_RS01720 0.44 +0.0
327,614 + A4249_RS01720 0.44 +0.2
327,615 - A4249_RS01720 0.44 +0.5
327,615 - A4249_RS01720 0.44 -0.4
327,615 - A4249_RS01720 0.44 +0.2
327,953 + A4249_RS01720 0.79 +0.1
327,953 + A4249_RS01720 0.79 +0.5
327,953 + A4249_RS01720 0.79 -0.2
327,953 + A4249_RS01720 0.79 -0.4
327,953 + A4249_RS01720 0.79 +0.6
327,953 + A4249_RS01720 0.79 -0.0
327,953 + A4249_RS01720 0.79 -0.2
327,953 + A4249_RS01720 0.79 -1.1
327,953 + A4249_RS01720 0.79 -0.1
327,954 - A4249_RS01720 0.79 +0.0
327,954 - A4249_RS01720 0.79 +0.0
327,954 - A4249_RS01720 0.79 -0.6
327,954 - A4249_RS01720 0.79 -0.5
327,970 + A4249_RS01720 0.80 +0.5
327,971 - A4249_RS01720 0.80 -0.4
327,971 - A4249_RS01720 0.80 +0.2
328,493 + A4249_RS01725 0.79 -0.4
328,493 + A4249_RS01725 0.79 +0.2
328,493 + A4249_RS01725 0.79 -1.2
328,493 + A4249_RS01725 0.79 -0.4
328,493 + A4249_RS01725 0.79 +0.2
328,494 - A4249_RS01725 0.79 +0.1
328,593 + -0.4
328,593 + +0.9
328,593 + -0.0
328,593 + -0.2
328,594 - -0.4
328,594 - -0.1
328,594 - -1.3
328,594 - +0.1
328,594 - +0.4

Or see this region's nucleotide sequence